RNA–Protein interactions for RNA: ENST00000570978.1

AC055872.1-201, humanhuman

BASIC

Gene AC055872.1, Length 278 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055872.1-201ENST00000570978 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
AC055872.1-201ENST00000570978 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
AC055872.1-201ENST00000570978 CCDC61Q9Y6R9 512 aa7.43□□□□□ -1.22
AC055872.1-201ENST00000570978 POTEJP0CG39 1038 aa7.42□□□□□ -1.22
AC055872.1-201ENST00000570978 ATN1P54259 1190 aaPredicted RBP7.4□□□□□ -1.22
AC055872.1-201ENST00000570978 KIF12Q96FN5 646 aa7.4□□□□□ -1.22
AC055872.1-201ENST00000570978 TRPC6Q9Y210 931 aa7.4□□□□□ -1.22
AC055872.1-201ENST00000570978 RASEFQ8IZ41 740 aa7.39□□□□□ -1.23
AC055872.1-201ENST00000570978 MIER1Q8N108 512 aa7.39□□□□□ -1.23
AC055872.1-201ENST00000570978 SLC39A7Q92504 469 aa7.39□□□□□ -1.23
AC055872.1-201ENST00000570978 C7P10643 843 aa7.38□□□□□ -1.23
AC055872.1-201ENST00000570978 POTEMA6NI47 508 aa7.36□□□□□ -1.23
AC055872.1-201ENST00000570978 MAP3K13O43283 966 aa7.36□□□□□ -1.23
AC055872.1-201ENST00000570978 BMP2KQ9NSY1 1161 aaPredicted RBP7.36□□□□□ -1.23
AC055872.1-201ENST00000570978 PLEKHG5O94827 1062 aa7.34□□□□□ -1.23
AC055872.1-201ENST00000570978 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
AC055872.1-201ENST00000570978 POTEFA5A3E0 1075 aa7.33□□□□□ -1.24
AC055872.1-201ENST00000570978 PLCD3Q8N3E9 789 aa7.32□□□□□ -1.24
AC055872.1-201ENST00000570978 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
AC055872.1-201ENST00000570978 TIE1P35590 1138 aa7.29□□□□□ -1.24
AC055872.1-201ENST00000570978 MAMSTRQ6ZN01 415 aa7.29□□□□□ -1.24
AC055872.1-201ENST00000570978 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
AC055872.1-201ENST00000570978 SCUBE2Q9NQ36 999 aa7.28□□□□□ -1.24
AC055872.1-201ENST00000570978 COLQQ9Y215 455 aaPredicted RBP7.28□□□□□ -1.24
AC055872.1-201ENST00000570978 NUBP1P53384 320 aa7.26□□□□□ -1.25
AC055872.1-201ENST00000570978 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
AC055872.1-201ENST00000570978 PCDHB13Q9Y5F0 798 aa7.26□□□□□ -1.25
AC055872.1-201ENST00000570978 FKBP8Q14318 412 aa7.25□□□□□ -1.25
AC055872.1-201ENST00000570978 SEC24BO95487 1268 aa7.24□□□□□ -1.25
AC055872.1-201ENST00000570978 TRIM35Q9UPQ4 493 aa7.24□□□□□ -1.25
AC055872.1-201ENST00000570978 IFNL1Q8IU54 200 aa7.23□□□□□ -1.25
AC055872.1-201ENST00000570978 ZBTB47Q9UFB7 747 aaPredicted RBP7.21□□□□□ -1.26
AC055872.1-201ENST00000570978 FAM212AQ96EL1 285 aa7.2□□□□□ -1.26
AC055872.1-201ENST00000570978 SGIP1Q9BQI5 828 aa7.2□□□□□ -1.26
AC055872.1-201ENST00000570978 TMEM106CQ9BVX2 250 aa7.19□□□□□ -1.26
AC055872.1-201ENST00000570978 IER5LQ5T953 404 aa7.18□□□□□ -1.26
AC055872.1-201ENST00000570978 PYGBP11216 843 aa7.15□□□□□ -1.26
AC055872.1-201ENST00000570978 PCDH10Q9P2E7 1040 aa7.15□□□□□ -1.26
AC055872.1-201ENST00000570978 DCAF8Q5TAQ9 597 aa7.14□□□□□ -1.27
AC055872.1-201ENST00000570978 PLCG2P16885 1265 aa7.13□□□□□ -1.27
AC055872.1-201ENST00000570978 SLAIN1Q8ND83 568 aa7.13□□□□□ -1.27
AC055872.1-201ENST00000570978 IRX5P78411 483 aaPredicted RBP7.12□□□□□ -1.27
AC055872.1-201ENST00000570978 PCDHB8Q9UN66 801 aa7.12□□□□□ -1.27
AC055872.1-201ENST00000570978 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
AC055872.1-201ENST00000570978 ST18O60284 1047 aa7.08□□□□□ -1.28
AC055872.1-201ENST00000570978 CDAN1Q8IWY9 1227 aa7.08□□□□□ -1.28
AC055872.1-201ENST00000570978 OCEL1Q9H607 264 aa7.06□□□□□ -1.28
AC055872.1-201ENST00000570978 KLHL34Q8N239 644 aa7.04□□□□□ -1.28
AC055872.1-201ENST00000570978 VASPP50552 380 aaPredicted RBP7.03□□□□□ -1.28
AC055872.1-201ENST00000570978 PDCD7Q8N8D1 485 aaKnown RBP7.01□□□□□ -1.29
AC055872.1-201ENST00000570978 EIF2AK3Q9NZJ5 1116 aaKnown RBP7□□□□□ -1.29
AC055872.1-201ENST00000570978 GSE1Q14687 1217 aa6.99□□□□□ -1.29
AC055872.1-201ENST00000570978 MARVELD3Q96A59 401 aa6.99□□□□□ -1.29
AC055872.1-201ENST00000570978 ZNF467Q7Z7K2 595 aaPredicted RBP6.98□□□□□ -1.29
AC055872.1-201ENST00000570978 GOLGA2Q08379 1002 aa6.97□□□□□ -1.29
AC055872.1-201ENST00000570978 MKRN3Q13064 507 aaKnown RBP6.97□□□□□ -1.29
AC055872.1-201ENST00000570978 PSEN1P49768 467 aa6.96□□□□□ -1.3
AC055872.1-201ENST00000570978 C3orf67Q6ZVT6 689 aa6.95□□□□□ -1.3
AC055872.1-201ENST00000570978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.3
AC055872.1-201ENST00000570978 SNPHO15079 494 aa6.94□□□□□ -1.3
AC055872.1-201ENST00000570978 CHRM1P11229 460 aaPredicted RBP6.94□□□□□ -1.3
AC055872.1-201ENST00000570978 TMEM121BQ9BXQ6 578 aaPredicted RBP6.94□□□□□ -1.3
AC055872.1-201ENST00000570978 DPY19L2Q6NUT2 758 aa6.92□□□□□ -1.3
AC055872.1-201ENST00000570978 IFNLR1Q8IU57 520 aaPredicted RBP6.91□□□□□ -1.3
AC055872.1-201ENST00000570978 L3MBTL3Q96JM7 780 aaPredicted RBP6.91□□□□□ -1.3
AC055872.1-201ENST00000570978 CIZ1Q9ULV3 898 aaPredicted RBP6.91□□□□□ -1.3
AC055872.1-201ENST00000570978 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 PDAP1Q13442 181 aaKnown RBP6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 CABP2Q9NPB3 220 aa6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 EMP3P54852 163 aa6.89□□□□□ -1.31
AC055872.1-201ENST00000570978 POTEB3A0JP26 581 aa6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 POTEBQ6S5H4 581 aa6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 ILDR1Q86SU0 546 aaPredicted RBP6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 SPOCK2Q92563 424 aa6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 FAM205CA6NFA0 338 aa6.85□□□□□ -1.31
AC055872.1-201ENST00000570978 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
AC055872.1-201ENST00000570978 BOLA1Q9Y3E2 137 aa6.84□□□□□ -1.31
AC055872.1-201ENST00000570978 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
AC055872.1-201ENST00000570978 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
AC055872.1-201ENST00000570978 G3V3G9 751 aa6.82□□□□□ -1.32
AC055872.1-201ENST00000570978 HOXB3P14651 431 aaPredicted RBP6.82□□□□□ -1.32
AC055872.1-201ENST00000570978 EFCAB3Q8N7B9 438 aa6.8□□□□□ -1.32
AC055872.1-201ENST00000570978 ZNF710Q8N1W2 664 aa6.76□□□□□ -1.33
AC055872.1-201ENST00000570978 HOXB1P14653 301 aaPredicted RBP6.74□□□□□ -1.33
AC055872.1-201ENST00000570978 TMEM92Q6UXU6 159 aa6.74□□□□□ -1.33
AC055872.1-201ENST00000570978 DOK7Q18PE1 504 aa6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 MICALL2Q8IY33 904 aa6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 RNF25Q96BH1 459 aaPredicted RBP6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 ERBB3P21860 1342 aa6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 TRIM41Q8WV44 630 aa6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 ZFP91Q96JP5 570 aaPredicted RBP6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 MS4A4AQ96JQ5 239 aa6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 RIOK3O14730 519 aaKnown RBP6.7□□□□□ -1.34
AC055872.1-201ENST00000570978 VARS2Q5ST30 1063 aaKnown RBP6.7□□□□□ -1.34
AC055872.1-201ENST00000570978 PHF8Q9UPP1 1060 aa6.7□□□□□ -1.34
AC055872.1-201ENST00000570978 RIMBP2O15034 1052 aa6.68□□□□□ -1.34
AC055872.1-201ENST00000570978 SOX12O15370 315 aa6.66□□□□□ -1.34
AC055872.1-201ENST00000570978 VGFO15240 615 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms