RNA–Protein interactions for RNA: ENST00000570978.1

AC055872.1-201, humanhuman

BASIC

Gene AC055872.1, Length 278 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055872.1-201ENST00000570978 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
AC055872.1-201ENST00000570978 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
AC055872.1-201ENST00000570978 CCDC61Q9Y6R9 512 aa7.43□□□□□ -1.22
AC055872.1-201ENST00000570978 POTEJP0CG39 1038 aa7.42□□□□□ -1.22
AC055872.1-201ENST00000570978 ATN1P54259 1190 aaPredicted RBP7.4□□□□□ -1.22
AC055872.1-201ENST00000570978 KIF12Q96FN5 646 aa7.4□□□□□ -1.22
AC055872.1-201ENST00000570978 TRPC6Q9Y210 931 aa7.4□□□□□ -1.22
AC055872.1-201ENST00000570978 RASEFQ8IZ41 740 aa7.39□□□□□ -1.23
AC055872.1-201ENST00000570978 MIER1Q8N108 512 aa7.39□□□□□ -1.23
AC055872.1-201ENST00000570978 SLC39A7Q92504 469 aa7.39□□□□□ -1.23
AC055872.1-201ENST00000570978 C7P10643 843 aa7.38□□□□□ -1.23
AC055872.1-201ENST00000570978 POTEMA6NI47 508 aa7.36□□□□□ -1.23
AC055872.1-201ENST00000570978 MAP3K13O43283 966 aa7.36□□□□□ -1.23
AC055872.1-201ENST00000570978 BMP2KQ9NSY1 1161 aaPredicted RBP7.36□□□□□ -1.23
AC055872.1-201ENST00000570978 PLEKHG5O94827 1062 aa7.34□□□□□ -1.23
AC055872.1-201ENST00000570978 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
AC055872.1-201ENST00000570978 POTEFA5A3E0 1075 aa7.33□□□□□ -1.24
AC055872.1-201ENST00000570978 PLCD3Q8N3E9 789 aa7.32□□□□□ -1.24
AC055872.1-201ENST00000570978 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
AC055872.1-201ENST00000570978 TIE1P35590 1138 aa7.29□□□□□ -1.24
AC055872.1-201ENST00000570978 MAMSTRQ6ZN01 415 aa7.29□□□□□ -1.24
AC055872.1-201ENST00000570978 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
AC055872.1-201ENST00000570978 SCUBE2Q9NQ36 999 aa7.28□□□□□ -1.24
AC055872.1-201ENST00000570978 COLQQ9Y215 455 aaPredicted RBP7.28□□□□□ -1.24
AC055872.1-201ENST00000570978 NUBP1P53384 320 aa7.26□□□□□ -1.25
AC055872.1-201ENST00000570978 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
AC055872.1-201ENST00000570978 PCDHB13Q9Y5F0 798 aa7.26□□□□□ -1.25
AC055872.1-201ENST00000570978 FKBP8Q14318 412 aa7.25□□□□□ -1.25
AC055872.1-201ENST00000570978 SEC24BO95487 1268 aa7.24□□□□□ -1.25
AC055872.1-201ENST00000570978 TRIM35Q9UPQ4 493 aa7.24□□□□□ -1.25
AC055872.1-201ENST00000570978 IFNL1Q8IU54 200 aa7.23□□□□□ -1.25
AC055872.1-201ENST00000570978 ZBTB47Q9UFB7 747 aaPredicted RBP7.21□□□□□ -1.26
AC055872.1-201ENST00000570978 FAM212AQ96EL1 285 aa7.2□□□□□ -1.26
AC055872.1-201ENST00000570978 SGIP1Q9BQI5 828 aa7.2□□□□□ -1.26
AC055872.1-201ENST00000570978 TMEM106CQ9BVX2 250 aa7.19□□□□□ -1.26
AC055872.1-201ENST00000570978 IER5LQ5T953 404 aa7.18□□□□□ -1.26
AC055872.1-201ENST00000570978 PYGBP11216 843 aa7.15□□□□□ -1.26
AC055872.1-201ENST00000570978 PCDH10Q9P2E7 1040 aa7.15□□□□□ -1.26
AC055872.1-201ENST00000570978 DCAF8Q5TAQ9 597 aa7.14□□□□□ -1.27
AC055872.1-201ENST00000570978 PLCG2P16885 1265 aa7.13□□□□□ -1.27
AC055872.1-201ENST00000570978 SLAIN1Q8ND83 568 aa7.13□□□□□ -1.27
AC055872.1-201ENST00000570978 IRX5P78411 483 aaPredicted RBP7.12□□□□□ -1.27
AC055872.1-201ENST00000570978 PCDHB8Q9UN66 801 aa7.12□□□□□ -1.27
AC055872.1-201ENST00000570978 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
AC055872.1-201ENST00000570978 ST18O60284 1047 aa7.08□□□□□ -1.28
AC055872.1-201ENST00000570978 CDAN1Q8IWY9 1227 aa7.08□□□□□ -1.28
AC055872.1-201ENST00000570978 OCEL1Q9H607 264 aa7.06□□□□□ -1.28
AC055872.1-201ENST00000570978 KLHL34Q8N239 644 aa7.04□□□□□ -1.28
AC055872.1-201ENST00000570978 VASPP50552 380 aaPredicted RBP7.03□□□□□ -1.28
AC055872.1-201ENST00000570978 PDCD7Q8N8D1 485 aaKnown RBP7.01□□□□□ -1.29
AC055872.1-201ENST00000570978 EIF2AK3Q9NZJ5 1116 aaKnown RBP7□□□□□ -1.29
AC055872.1-201ENST00000570978 GSE1Q14687 1217 aa6.99□□□□□ -1.29
AC055872.1-201ENST00000570978 MARVELD3Q96A59 401 aa6.99□□□□□ -1.29
AC055872.1-201ENST00000570978 ZNF467Q7Z7K2 595 aaPredicted RBP6.98□□□□□ -1.29
AC055872.1-201ENST00000570978 GOLGA2Q08379 1002 aa6.97□□□□□ -1.29
AC055872.1-201ENST00000570978 MKRN3Q13064 507 aaKnown RBP6.97□□□□□ -1.29
AC055872.1-201ENST00000570978 PSEN1P49768 467 aa6.96□□□□□ -1.3
AC055872.1-201ENST00000570978 C3orf67Q6ZVT6 689 aa6.95□□□□□ -1.3
AC055872.1-201ENST00000570978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.3
AC055872.1-201ENST00000570978 SNPHO15079 494 aa6.94□□□□□ -1.3
AC055872.1-201ENST00000570978 CHRM1P11229 460 aaPredicted RBP6.94□□□□□ -1.3
AC055872.1-201ENST00000570978 TMEM121BQ9BXQ6 578 aaPredicted RBP6.94□□□□□ -1.3
AC055872.1-201ENST00000570978 DPY19L2Q6NUT2 758 aa6.92□□□□□ -1.3
AC055872.1-201ENST00000570978 IFNLR1Q8IU57 520 aaPredicted RBP6.91□□□□□ -1.3
AC055872.1-201ENST00000570978 L3MBTL3Q96JM7 780 aaPredicted RBP6.91□□□□□ -1.3
AC055872.1-201ENST00000570978 CIZ1Q9ULV3 898 aaPredicted RBP6.91□□□□□ -1.3
AC055872.1-201ENST00000570978 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 PDAP1Q13442 181 aaKnown RBP6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 CABP2Q9NPB3 220 aa6.9□□□□□ -1.3
AC055872.1-201ENST00000570978 EMP3P54852 163 aa6.89□□□□□ -1.31
AC055872.1-201ENST00000570978 POTEB3A0JP26 581 aa6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 POTEBQ6S5H4 581 aa6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 ILDR1Q86SU0 546 aaPredicted RBP6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 SPOCK2Q92563 424 aa6.88□□□□□ -1.31
AC055872.1-201ENST00000570978 FAM205CA6NFA0 338 aa6.85□□□□□ -1.31
AC055872.1-201ENST00000570978 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
AC055872.1-201ENST00000570978 BOLA1Q9Y3E2 137 aa6.84□□□□□ -1.31
AC055872.1-201ENST00000570978 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
AC055872.1-201ENST00000570978 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
AC055872.1-201ENST00000570978 G3V3G9 751 aa6.82□□□□□ -1.32
AC055872.1-201ENST00000570978 HOXB3P14651 431 aaPredicted RBP6.82□□□□□ -1.32
AC055872.1-201ENST00000570978 EFCAB3Q8N7B9 438 aa6.8□□□□□ -1.32
AC055872.1-201ENST00000570978 ZNF710Q8N1W2 664 aa6.76□□□□□ -1.33
AC055872.1-201ENST00000570978 HOXB1P14653 301 aaPredicted RBP6.74□□□□□ -1.33
AC055872.1-201ENST00000570978 TMEM92Q6UXU6 159 aa6.74□□□□□ -1.33
AC055872.1-201ENST00000570978 DOK7Q18PE1 504 aa6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 MICALL2Q8IY33 904 aa6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 RNF25Q96BH1 459 aaPredicted RBP6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 ERBB3P21860 1342 aa6.73□□□□□ -1.33
AC055872.1-201ENST00000570978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 TRIM41Q8WV44 630 aa6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 ZFP91Q96JP5 570 aaPredicted RBP6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 MS4A4AQ96JQ5 239 aa6.71□□□□□ -1.34
AC055872.1-201ENST00000570978 RIOK3O14730 519 aaKnown RBP6.7□□□□□ -1.34
AC055872.1-201ENST00000570978 VARS2Q5ST30 1063 aaKnown RBP6.7□□□□□ -1.34
AC055872.1-201ENST00000570978 PHF8Q9UPP1 1060 aa6.7□□□□□ -1.34
AC055872.1-201ENST00000570978 RIMBP2O15034 1052 aa6.68□□□□□ -1.34
AC055872.1-201ENST00000570978 SOX12O15370 315 aa6.66□□□□□ -1.34
AC055872.1-201ENST00000570978 VGFO15240 615 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms