RNA–Protein interactions for RNA: ENST00000568841.5

SNAP23-220, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-220ENST00000568841 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
SNAP23-220ENST00000568841 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
SNAP23-220ENST00000568841 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
SNAP23-220ENST00000568841 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
SNAP23-220ENST00000568841 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
SNAP23-220ENST00000568841 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
SNAP23-220ENST00000568841 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
SNAP23-220ENST00000568841 FKBP8Q14318 412 aa14.74□□□□□ -0.05
SNAP23-220ENST00000568841 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
SNAP23-220ENST00000568841 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
SNAP23-220ENST00000568841 POTEIP0CG38 1075 aa14.72□□□□□ -0.05
SNAP23-220ENST00000568841 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNAP23-220ENST00000568841 CLCN6P51797 869 aa14.68□□□□□ -0.06
SNAP23-220ENST00000568841 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
SNAP23-220ENST00000568841 NESP48681 1621 aa14.66□□□□□ -0.06
SNAP23-220ENST00000568841 CUX2O14529 1486 aa14.64□□□□□ -0.07
SNAP23-220ENST00000568841 PHF12Q96QT6 1004 aa14.61□□□□□ -0.07
SNAP23-220ENST00000568841 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
SNAP23-220ENST00000568841 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
SNAP23-220ENST00000568841 ERCC6Q03468 1493 aa14.59□□□□□ -0.07
SNAP23-220ENST00000568841 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
SNAP23-220ENST00000568841 MIER1Q8N108 512 aa14.55□□□□□ -0.08
SNAP23-220ENST00000568841 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
SNAP23-220ENST00000568841 WIZO95785 1651 aa14.52□□□□□ -0.08
SNAP23-220ENST00000568841 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
SNAP23-220ENST00000568841 CCDC61Q9Y6R9 512 aa14.5□□□□□ -0.09
SNAP23-220ENST00000568841 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
SNAP23-220ENST00000568841 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
SNAP23-220ENST00000568841 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
SNAP23-220ENST00000568841 DCBLD2Q96PD2 775 aa14.46□□□□□ -0.09
SNAP23-220ENST00000568841 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
SNAP23-220ENST00000568841 PLCD3Q8N3E9 789 aa14.44□□□□□ -0.1
SNAP23-220ENST00000568841 KIF21AQ7Z4S6 1674 aa14.44□□□□□ -0.1
SNAP23-220ENST00000568841 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
SNAP23-220ENST00000568841 LHX8Q68G74 356 aa14.43□□□□□ -0.1
SNAP23-220ENST00000568841 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
SNAP23-220ENST00000568841 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
SNAP23-220ENST00000568841 NUBP1P53384 320 aa14.4□□□□□ -0.1
SNAP23-220ENST00000568841 KIF12Q96FN5 646 aa14.38□□□□□ -0.11
SNAP23-220ENST00000568841 CFTRP13569 1480 aa14.34□□□□□ -0.11
SNAP23-220ENST00000568841 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
SNAP23-220ENST00000568841 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
SNAP23-220ENST00000568841 MRC2Q9UBG0 1479 aa14.32□□□□□ -0.12
SNAP23-220ENST00000568841 WDR62O43379 1518 aa14.32□□□□□ -0.12
SNAP23-220ENST00000568841 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
SNAP23-220ENST00000568841 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
SNAP23-220ENST00000568841 ASTLQ6HA08 431 aaPredicted RBP14.31□□□□□ -0.12
SNAP23-220ENST00000568841 MAP3K13O43283 966 aa14.28□□□□□ -0.12
SNAP23-220ENST00000568841 ATMINO43313 823 aaPredicted RBP14.28□□□□□ -0.12
SNAP23-220ENST00000568841 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
SNAP23-220ENST00000568841 TRPC6Q9Y210 931 aa14.27□□□□□ -0.13
SNAP23-220ENST00000568841 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
SNAP23-220ENST00000568841 POTEB2H3BUK9 544 aa14.23□□□□□ -0.13
SNAP23-220ENST00000568841 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
SNAP23-220ENST00000568841 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
SNAP23-220ENST00000568841 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
SNAP23-220ENST00000568841 ATN1P54259 1190 aaPredicted RBP14.19□□□□□ -0.14
SNAP23-220ENST00000568841 BMP2KQ9NSY1 1161 aaPredicted RBP14.18□□□□□ -0.14
SNAP23-220ENST00000568841 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
SNAP23-220ENST00000568841 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
SNAP23-220ENST00000568841 TIE1P35590 1138 aa14.14□□□□□ -0.15
SNAP23-220ENST00000568841 METRNQ9UJH8 293 aa14.13□□□□□ -0.15
SNAP23-220ENST00000568841 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
SNAP23-220ENST00000568841 SLC39A7Q92504 469 aa14.12□□□□□ -0.15
SNAP23-220ENST00000568841 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
SNAP23-220ENST00000568841 PCDHB13Q9Y5F0 798 aa14.1□□□□□ -0.15
SNAP23-220ENST00000568841 C7P10643 843 aa14.09□□□□□ -0.15
SNAP23-220ENST00000568841 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
SNAP23-220ENST00000568841 POTEFA5A3E0 1075 aa14.08□□□□□ -0.16
SNAP23-220ENST00000568841 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
SNAP23-220ENST00000568841 POTEJP0CG39 1038 aa14.08□□□□□ -0.16
SNAP23-220ENST00000568841 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
SNAP23-220ENST00000568841 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
SNAP23-220ENST00000568841 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
SNAP23-220ENST00000568841 PYGBP11216 843 aa14.01□□□□□ -0.17
SNAP23-220ENST00000568841 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
SNAP23-220ENST00000568841 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
SNAP23-220ENST00000568841 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
SNAP23-220ENST00000568841 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
SNAP23-220ENST00000568841 ABCC8Q09428 1581 aa13.96□□□□□ -0.17
SNAP23-220ENST00000568841 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.17
SNAP23-220ENST00000568841 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
SNAP23-220ENST00000568841 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
SNAP23-220ENST00000568841 GSE1Q14687 1217 aa13.93□□□□□ -0.18
SNAP23-220ENST00000568841 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
SNAP23-220ENST00000568841 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
SNAP23-220ENST00000568841 CHRM1P11229 460 aaPredicted RBP13.9□□□□□ -0.18
SNAP23-220ENST00000568841 IER5LQ5T953 404 aa13.9□□□□□ -0.18
SNAP23-220ENST00000568841 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
SNAP23-220ENST00000568841 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
SNAP23-220ENST00000568841 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
SNAP23-220ENST00000568841 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNAP23-220ENST00000568841 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
SNAP23-220ENST00000568841 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
SNAP23-220ENST00000568841 CUX1P39880 1505 aa13.83□□□□□ -0.2
SNAP23-220ENST00000568841 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
SNAP23-220ENST00000568841 SOGA1O94964 1423 aa13.81□□□□□ -0.2
SNAP23-220ENST00000568841 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
SNAP23-220ENST00000568841 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
SNAP23-220ENST00000568841 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms