RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.141e-5■■■■□ 24.6
FANCA-230ENST00000568369 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
FANCA-230ENST00000568369 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
FANCA-230ENST00000568369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.144e-7■■□□□ 12.9
FANCA-230ENST00000568369 EIF5BO60841 1220 aaKnown RBP14.17□□□□□ -0.14
FANCA-230ENST00000568369 ANP32BQ92688 251 aaKnown RBP14.17□□□□□ -0.14
FANCA-230ENST00000568369 BAZ1AQ9NRL2 1556 aaPredicted RBP14.16□□□□□ -0.14
FANCA-230ENST00000568369 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
FANCA-230ENST00000568369 ANP32EQ9BTT0 268 aa14.14□□□□□ -0.15
FANCA-230ENST00000568369 SUPT16HQ9Y5B9 1047 aaKnown RBP14.14□□□□□ -0.15
FANCA-230ENST00000568369 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
FANCA-230ENST00000568369 SIN3AQ96ST3 1273 aa14.11□□□□□ -0.15
FANCA-230ENST00000568369 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
FANCA-230ENST00000568369 SOGA1O94964 1423 aa14.09□□□□□ -0.15
FANCA-230ENST00000568369 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
FANCA-230ENST00000568369 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
FANCA-230ENST00000568369 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
FANCA-230ENST00000568369 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
FANCA-230ENST00000568369 DDRGK1Q96HY6 314 aa14.05□□□□□ -0.16
FANCA-230ENST00000568369 VPS8Q8N3P4 1428 aa14.04□□□□□ -0.16
FANCA-230ENST00000568369 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
FANCA-230ENST00000568369 ESF1Q9H501 851 aaKnown RBP14.04□□□□□ -0.16
FANCA-230ENST00000568369 PLEKHD1A6NEE1 506 aa14.04□□□□□ -0.16
FANCA-230ENST00000568369 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
FANCA-230ENST00000568369 CFDP1Q9UEE9 299 aaPredicted RBP14.02□□□□□ -0.17
FANCA-230ENST00000568369 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
FANCA-230ENST00000568369 CCER2I3L3R5 266 aa14□□□□□ -0.17
FANCA-230ENST00000568369 RGL3Q3MIN7 710 aa14□□□□□ -0.17
FANCA-230ENST00000568369 BECN1Q14457 450 aa13.98□□□□□ -0.17
FANCA-230ENST00000568369 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
FANCA-230ENST00000568369 GLIPR1L2Q4G1C9 344 aa13.97□□□□□ -0.17
FANCA-230ENST00000568369 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
FANCA-230ENST00000568369 ARXQ96QS3 562 aa13.97□□□□□ -0.17
FANCA-230ENST00000568369 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.17
FANCA-230ENST00000568369 KNSTRNQ9Y448 316 aa13.95□□□□□ -0.18
FANCA-230ENST00000568369 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
FANCA-230ENST00000568369 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
FANCA-230ENST00000568369 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
FANCA-230ENST00000568369 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
FANCA-230ENST00000568369 MYH16Q9H6N6 1097 aa13.93□□□□□ -0.18
FANCA-230ENST00000568369 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
FANCA-230ENST00000568369 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
FANCA-230ENST00000568369 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
FANCA-230ENST00000568369 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
FANCA-230ENST00000568369 CUX2O14529 1486 aa13.9□□□□□ -0.18
FANCA-230ENST00000568369 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
FANCA-230ENST00000568369 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
FANCA-230ENST00000568369 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
FANCA-230ENST00000568369 RAB3GAP2Q9H2M9 1393 aa13.86□□□□□ -0.19
FANCA-230ENST00000568369 ERICH6BQ5W0A0 696 aa13.86□□□□□ -0.19
FANCA-230ENST00000568369 ARHGAP35Q9NRY4 1499 aa13.85□□□□□ -0.19
FANCA-230ENST00000568369 HSPA5P11021 654 aaKnown RBP13.85□□□□□ -0.19
FANCA-230ENST00000568369 GOLGA6L22H0YM25 854 aa13.83□□□□□ -0.19
FANCA-230ENST00000568369 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
FANCA-230ENST00000568369 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
FANCA-230ENST00000568369 RGS3P49796 1198 aa13.82□□□□□ -0.2
FANCA-230ENST00000568369 FTSJ3Q8IY81 847 aaKnown RBP13.81□□□□□ -0.2
FANCA-230ENST00000568369 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
FANCA-230ENST00000568369 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
FANCA-230ENST00000568369 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
FANCA-230ENST00000568369 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
FANCA-230ENST00000568369 TMF1P82094 1093 aa13.79□□□□□ -0.2
FANCA-230ENST00000568369 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
FANCA-230ENST00000568369 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
FANCA-230ENST00000568369 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
FANCA-230ENST00000568369 FRAT1Q92837 279 aaPredicted RBP13.76□□□□□ -0.21
FANCA-230ENST00000568369 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
FANCA-230ENST00000568369 NCLP19338 710 aaKnown RBP13.75□□□□□ -0.21
FANCA-230ENST00000568369 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
FANCA-230ENST00000568369 WIZO95785 1651 aa13.75□□□□□ -0.21
FANCA-230ENST00000568369 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
FANCA-230ENST00000568369 MS4A1P11836 297 aa13.74□□□□□ -0.21
FANCA-230ENST00000568369 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
FANCA-230ENST00000568369 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
FANCA-230ENST00000568369 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
FANCA-230ENST00000568369 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
FANCA-230ENST00000568369 PKD2Q13563 968 aa13.73□□□□□ -0.21
FANCA-230ENST00000568369 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
FANCA-230ENST00000568369 DEKP35659 375 aaKnown RBP13.71□□□□□ -0.21
FANCA-230ENST00000568369 FOXD1Q16676 465 aa13.71□□□□□ -0.21
FANCA-230ENST00000568369 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.22
FANCA-230ENST00000568369 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
FANCA-230ENST00000568369 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
FANCA-230ENST00000568369 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
FANCA-230ENST00000568369 TNNT2P45379 298 aaPredicted RBP13.69□□□□□ -0.22
FANCA-230ENST00000568369 RALBP1Q15311 655 aa13.68□□□□□ -0.22
FANCA-230ENST00000568369 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
FANCA-230ENST00000568369 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
FANCA-230ENST00000568369 TCERG1O14776 1098 aaKnown RBP13.66□□□□□ -0.22
FANCA-230ENST00000568369 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
FANCA-230ENST00000568369 POGKQ9P215 609 aa13.65□□□□□ -0.22
FANCA-230ENST00000568369 U2SURPO15042 1029 aaKnown RBP13.65□□□□□ -0.22
FANCA-230ENST00000568369 PTMAP06454 111 aaKnown RBP13.64□□□□□ -0.23
FANCA-230ENST00000568369 PNNQ9H307 717 aaKnown RBP13.64□□□□□ -0.23
FANCA-230ENST00000568369 RUSC2Q8N2Y8 1516 aa13.63□□□□□ -0.23
FANCA-230ENST00000568369 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
FANCA-230ENST00000568369 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
FANCA-230ENST00000568369 NUP155O75694 1391 aa13.62□□□□□ -0.23
FANCA-230ENST00000568369 KANK1Q14678 1352 aa13.62□□□□□ -0.23
FANCA-230ENST00000568369 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms