RNA–Protein interactions for RNA: ENST00000566474.5

TMEM87A-209, Transcript of transmembrane protein 87A, humanhuman

TSL 4

Gene TMEM87A, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-209ENST00000566474 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
TMEM87A-209ENST00000566474 MIER1Q8N108 512 aa13.44□□□□□ -0.26
TMEM87A-209ENST00000566474 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
TMEM87A-209ENST00000566474 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
TMEM87A-209ENST00000566474 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
TMEM87A-209ENST00000566474 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
TMEM87A-209ENST00000566474 C7P10643 843 aa13.4□□□□□ -0.26
TMEM87A-209ENST00000566474 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
TMEM87A-209ENST00000566474 ATN1P54259 1190 aaPredicted RBP13.35□□□□□ -0.27
TMEM87A-209ENST00000566474 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
TMEM87A-209ENST00000566474 MAP3K13O43283 966 aa13.32□□□□□ -0.28
TMEM87A-209ENST00000566474 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
TMEM87A-209ENST00000566474 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
TMEM87A-209ENST00000566474 PLSCR2Q9NRY7 297 aa13.3□□□□□ -0.28
TMEM87A-209ENST00000566474 BMP2KQ9NSY1 1161 aaPredicted RBP13.3□□□□□ -0.28
TMEM87A-209ENST00000566474 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
TMEM87A-209ENST00000566474 TIE1P35590 1138 aa13.25□□□□□ -0.29
TMEM87A-209ENST00000566474 POTEMA6NI47 508 aa13.24□□□□□ -0.29
TMEM87A-209ENST00000566474 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
TMEM87A-209ENST00000566474 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
TMEM87A-209ENST00000566474 NUBP1P53384 320 aa13.19□□□□□ -0.3
TMEM87A-209ENST00000566474 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
TMEM87A-209ENST00000566474 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
TMEM87A-209ENST00000566474 SCUBE2Q9NQ36 999 aa13.17□□□□□ -0.3
TMEM87A-209ENST00000566474 FKBP8Q14318 412 aa13.16□□□□□ -0.3
TMEM87A-209ENST00000566474 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
TMEM87A-209ENST00000566474 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
TMEM87A-209ENST00000566474 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
TMEM87A-209ENST00000566474 SEC24BO95487 1268 aa13.1□□□□□ -0.31
TMEM87A-209ENST00000566474 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
TMEM87A-209ENST00000566474 LCE2DQ5TA82 110 aaPredicted RBP13.08□□□□□ -0.32
TMEM87A-209ENST00000566474 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
TMEM87A-209ENST00000566474 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
TMEM87A-209ENST00000566474 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.32
TMEM87A-209ENST00000566474 IER5LQ5T953 404 aa13.05□□□□□ -0.32
TMEM87A-209ENST00000566474 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
TMEM87A-209ENST00000566474 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
TMEM87A-209ENST00000566474 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
TMEM87A-209ENST00000566474 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
TMEM87A-209ENST00000566474 PYGBP11216 843 aa12.93□□□□□ -0.34
TMEM87A-209ENST00000566474 PLCG2P16885 1265 aa12.91□□□□□ -0.34
TMEM87A-209ENST00000566474 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
TMEM87A-209ENST00000566474 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
TMEM87A-209ENST00000566474 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
TMEM87A-209ENST00000566474 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
TMEM87A-209ENST00000566474 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
TMEM87A-209ENST00000566474 VASPP50552 380 aaPredicted RBP12.8□□□□□ -0.36
TMEM87A-209ENST00000566474 ST18O60284 1047 aa12.77□□□□□ -0.37
TMEM87A-209ENST00000566474 GSE1Q14687 1217 aa12.77□□□□□ -0.37
TMEM87A-209ENST00000566474 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
TMEM87A-209ENST00000566474 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
TMEM87A-209ENST00000566474 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
TMEM87A-209ENST00000566474 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
TMEM87A-209ENST00000566474 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
TMEM87A-209ENST00000566474 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
TMEM87A-209ENST00000566474 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
TMEM87A-209ENST00000566474 PSEN1P49768 467 aa12.64□□□□□ -0.39
TMEM87A-209ENST00000566474 SNPHO15079 494 aa12.63□□□□□ -0.39
TMEM87A-209ENST00000566474 TMEM121BQ9BXQ6 578 aaPredicted RBP12.61□□□□□ -0.39
TMEM87A-209ENST00000566474 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
TMEM87A-209ENST00000566474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
TMEM87A-209ENST00000566474 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
TMEM87A-209ENST00000566474 IFNLR1Q8IU57 520 aaPredicted RBP12.57□□□□□ -0.4
TMEM87A-209ENST00000566474 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
TMEM87A-209ENST00000566474 PDAP1Q13442 181 aaKnown RBP12.55□□□□□ -0.4
TMEM87A-209ENST00000566474 MARVELD3Q96A59 401 aa12.55□□□□□ -0.4
TMEM87A-209ENST00000566474 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
TMEM87A-209ENST00000566474 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
TMEM87A-209ENST00000566474 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
TMEM87A-209ENST00000566474 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
TMEM87A-209ENST00000566474 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
TMEM87A-209ENST00000566474 EMP3P54852 163 aa12.43□□□□□ -0.42
TMEM87A-209ENST00000566474 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
TMEM87A-209ENST00000566474 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
TMEM87A-209ENST00000566474 G3V3G9 751 aa12.38□□□□□ -0.43
TMEM87A-209ENST00000566474 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
TMEM87A-209ENST00000566474 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
TMEM87A-209ENST00000566474 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
TMEM87A-209ENST00000566474 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
TMEM87A-209ENST00000566474 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
TMEM87A-209ENST00000566474 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
TMEM87A-209ENST00000566474 EFCAB3Q8N7B9 438 aa12.32□□□□□ -0.44
TMEM87A-209ENST00000566474 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
TMEM87A-209ENST00000566474 KRTAP3-2Q9BYR7 98 aa12.31□□□□□ -0.44
TMEM87A-209ENST00000566474 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
TMEM87A-209ENST00000566474 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
TMEM87A-209ENST00000566474 DOK7Q18PE1 504 aa12.23□□□□□ -0.45
TMEM87A-209ENST00000566474 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
TMEM87A-209ENST00000566474 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
TMEM87A-209ENST00000566474 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
TMEM87A-209ENST00000566474 SOX12O15370 315 aa12.18□□□□□ -0.46
TMEM87A-209ENST00000566474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
TMEM87A-209ENST00000566474 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
TMEM87A-209ENST00000566474 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
TMEM87A-209ENST00000566474 ERBB3P21860 1342 aa12.16□□□□□ -0.46
TMEM87A-209ENST00000566474 RIMBP2O15034 1052 aa12.15□□□□□ -0.46
TMEM87A-209ENST00000566474 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
TMEM87A-209ENST00000566474 VGFO15240 615 aaPredicted RBP12.14□□□□□ -0.47
TMEM87A-209ENST00000566474 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
TMEM87A-209ENST00000566474 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms