RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
HERPUD1-207ENST00000563781 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
HERPUD1-207ENST00000563781 ATAD2BQ9ULI0 1458 aa9.45□□□□□ -0.9
HERPUD1-207ENST00000563781 KLHL34Q8N239 644 aa9.44□□□□□ -0.9
HERPUD1-207ENST00000563781 PEG3Q9GZU2 1588 aa9.43□□□□□ -0.9
HERPUD1-207ENST00000563781 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
HERPUD1-207ENST00000563781 PRKAR2AP13861 404 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-207ENST00000563781 MNX1P50219 401 aaPredicted RBP9.42□□□□□ -0.9
HERPUD1-207ENST00000563781 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
HERPUD1-207ENST00000563781 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
HERPUD1-207ENST00000563781 NCAPD3P42695 1498 aa9.41□□□□□ -0.9
HERPUD1-207ENST00000563781 WIZO95785 1651 aa9.39□□□□□ -0.91
HERPUD1-207ENST00000563781 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
HERPUD1-207ENST00000563781 HMGXB3Q12766 1538 aa9.37□□□□□ -0.91
HERPUD1-207ENST00000563781 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
HERPUD1-207ENST00000563781 BAZ1BQ9UIG0 1483 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-207ENST00000563781 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-207ENST00000563781 SUPT5HO00267 1087 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-207ENST00000563781 NPM1P06748 294 aaKnown RBP eCLIP9.32□□□□□ -0.92
HERPUD1-207ENST00000563781 NUBP1P53384 320 aa9.32□□□□□ -0.92
HERPUD1-207ENST00000563781 RASEFQ8IZ41 740 aa9.26□□□□□ -0.93
HERPUD1-207ENST00000563781 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
HERPUD1-207ENST00000563781 PKD2Q13563 968 aa9.23□□□□□ -0.93
HERPUD1-207ENST00000563781 GSE1Q14687 1217 aa9.22□□□□□ -0.93
HERPUD1-207ENST00000563781 DCAF8Q5TAQ9 597 aa9.22□□□□□ -0.93
HERPUD1-207ENST00000563781 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.93
HERPUD1-207ENST00000563781 FAM212AQ96EL1 285 aa9.21□□□□□ -0.94
HERPUD1-207ENST00000563781 CIZ1Q9ULV3 898 aaPredicted RBP9.21□□□□□ -0.94
HERPUD1-207ENST00000563781 POTEHQ6S545 545 aa9.18□□□□□ -0.94
HERPUD1-207ENST00000563781 C19orf67A6NJJ6 358 aa9.17□□□□□ -0.94
HERPUD1-207ENST00000563781 TSPYL2Q9H2G4 693 aaPredicted RBP9.17□□□□□ -0.94
HERPUD1-207ENST00000563781 CD44P16070 742 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-207ENST00000563781 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
HERPUD1-207ENST00000563781 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-207ENST00000563781 TRIM41Q8WV44 630 aa9.14□□□□□ -0.95
HERPUD1-207ENST00000563781 NESP48681 1621 aa9.13□□□□□ -0.95
HERPUD1-207ENST00000563781 PAK3O75914 559 aaPredicted RBP9.13□□□□□ -0.95
HERPUD1-207ENST00000563781 CFTRP13569 1480 aa9.13□□□□□ -0.95
HERPUD1-207ENST00000563781 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
HERPUD1-207ENST00000563781 HAX1O00165 279 aa9.11□□□□□ -0.95
HERPUD1-207ENST00000563781 CHRM1P11229 460 aaPredicted RBP9.11□□□□□ -0.95
HERPUD1-207ENST00000563781 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
HERPUD1-207ENST00000563781 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
HERPUD1-207ENST00000563781 PYGBP11216 843 aa9.08□□□□□ -0.96
HERPUD1-207ENST00000563781 EVX2Q03828 476 aa9.07□□□□□ -0.96
HERPUD1-207ENST00000563781 RGL2O15211 777 aa9.06□□□□□ -0.96
HERPUD1-207ENST00000563781 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
HERPUD1-207ENST00000563781 ZNF579Q8NAF0 562 aaKnown RBP9.04□□□□□ -0.96
HERPUD1-207ENST00000563781 FANCD2Q9BXW9 1451 aa9.03□□□□□ -0.96
HERPUD1-207ENST00000563781 KIF12Q96FN5 646 aa9.03□□□□□ -0.96
HERPUD1-207ENST00000563781 PHF12Q96QT6 1004 aa9.03□□□□□ -0.96
HERPUD1-207ENST00000563781 RNF25Q96BH1 459 aaPredicted RBP9.02□□□□□ -0.97
HERPUD1-207ENST00000563781 MAP3K13O43283 966 aa9□□□□□ -0.97
HERPUD1-207ENST00000563781 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
HERPUD1-207ENST00000563781 ERCC6Q03468 1493 aa9□□□□□ -0.97
HERPUD1-207ENST00000563781 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
HERPUD1-207ENST00000563781 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-207ENST00000563781 PRDM2Q13029 1718 aa8.98□□□□□ -0.97
HERPUD1-207ENST00000563781 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
HERPUD1-207ENST00000563781 PCDHB13Q9Y5F0 798 aa8.97□□□□□ -0.97
HERPUD1-207ENST00000563781 ZNF467Q7Z7K2 595 aaPredicted RBP8.96□□□□□ -0.98
HERPUD1-207ENST00000563781 IFNL1Q8IU54 200 aa8.96□□□□□ -0.98
HERPUD1-207ENST00000563781 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
HERPUD1-207ENST00000563781 MRC2Q9UBG0 1479 aa8.96□□□□□ -0.98
HERPUD1-207ENST00000563781 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-207ENST00000563781 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-207ENST00000563781 CLCN6P51797 869 aa8.94□□□□□ -0.98
HERPUD1-207ENST00000563781 VGFO15240 615 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-207ENST00000563781 ABCC8Q09428 1581 aa8.92□□□□□ -0.98
HERPUD1-207ENST00000563781 WDR62O43379 1518 aa8.92□□□□□ -0.98
HERPUD1-207ENST00000563781 CUX1P39880 1505 aa8.92□□□□□ -0.98
HERPUD1-207ENST00000563781 MS4A3Q96HJ5 214 aa8.92□□□□□ -0.98
HERPUD1-207ENST00000563781 TAOK2Q9UL54 1235 aa8.92□□□□□ -0.98
HERPUD1-207ENST00000563781 TOPBP1Q92547 1522 aa8.91□□□□□ -0.98
HERPUD1-207ENST00000563781 WRNQ14191 1432 aaPredicted RBP eCLIP8.91□□□□□ -0.98
HERPUD1-207ENST00000563781 DNMBPQ6XZF7 1577 aa8.9□□□□□ -0.98
HERPUD1-207ENST00000563781 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
HERPUD1-207ENST00000563781 GABBR2O75899 941 aa8.89□□□□□ -0.99
HERPUD1-207ENST00000563781 PDAP1Q13442 181 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-207ENST00000563781 SYNJ1O43426 1573 aa8.88□□□□□ -0.99
HERPUD1-207ENST00000563781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-207ENST00000563781 ZFP91Q96JP5 570 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-207ENST00000563781 CHGAP10645 457 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-207ENST00000563781 PSEN1P49768 467 aa8.87□□□□□ -0.99
HERPUD1-207ENST00000563781 TRPC6Q9Y210 931 aa8.87□□□□□ -0.99
HERPUD1-207ENST00000563781 CUX2O14529 1486 aa8.86□□□□□ -0.99
HERPUD1-207ENST00000563781 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
HERPUD1-207ENST00000563781 SP7Q8TDD2 431 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-207ENST00000563781 TOP2BQ02880 1626 aa8.86□□□□□ -0.99
HERPUD1-207ENST00000563781 POLA1P09884 1462 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-207ENST00000563781 BIVM-ERCC5R4GMW8 1640 aa8.85□□□□□ -0.99
HERPUD1-207ENST00000563781 FGD5Q6ZNL6 1462 aa8.84□□□□□ -0.99
HERPUD1-207ENST00000563781 STK25O00506 426 aa8.84□□□□□ -0.99
HERPUD1-207ENST00000563781 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
HERPUD1-207ENST00000563781 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
HERPUD1-207ENST00000563781 TIE1P35590 1138 aa8.82□□□□□ -1
HERPUD1-207ENST00000563781 STK24Q9Y6E0 443 aa8.82□□□□□ -1
HERPUD1-207ENST00000563781 RAD54L2Q9Y4B4 1467 aa8.82□□□□□ -1
HERPUD1-207ENST00000563781 BBXQ8WY36 941 aaPredicted RBP8.81□□□□□ -1
HERPUD1-207ENST00000563781 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms