RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 RASEFQ8IZ41 740 aa8.24□□□□□ -1.09
CHD9-207ENST00000562806 TSPYL2Q9H2G4 693 aaPredicted RBP8.22□□□□□ -1.09
CHD9-207ENST00000562806 CHRM1P11229 460 aaPredicted RBP8.2□□□□□ -1.1
CHD9-207ENST00000562806 ZRANB1Q9UGI0 708 aa8.2□□□□□ -1.1
CHD9-207ENST00000562806 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
CHD9-207ENST00000562806 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
CHD9-207ENST00000562806 SGIP1Q9BQI5 828 aa8.17□□□□□ -1.1
CHD9-207ENST00000562806 TAOK2Q9UL54 1235 aa8.17□□□□□ -1.1
CHD9-207ENST00000562806 CCDC61Q9Y6R9 512 aa8.17□□□□□ -1.1
CHD9-207ENST00000562806 PKD2Q13563 968 aa8.16□□□□□ -1.1
CHD9-207ENST00000562806 RTN4Q9NQC3 1192 aaKnown RBP8.16□□□□□ -1.1
CHD9-207ENST00000562806 ZNF467Q7Z7K2 595 aaPredicted RBP8.12□□□□□ -1.11
CHD9-207ENST00000562806 PYGBP11216 843 aa8.11□□□□□ -1.11
CHD9-207ENST00000562806 KIF12Q96FN5 646 aa8.1□□□□□ -1.11
CHD9-207ENST00000562806 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
CHD9-207ENST00000562806 PCDHB13Q9Y5F0 798 aa8.07□□□□□ -1.12
CHD9-207ENST00000562806 PHF12Q96QT6 1004 aa8.06□□□□□ -1.12
CHD9-207ENST00000562806 MAP3K13O43283 966 aa8.05□□□□□ -1.12
CHD9-207ENST00000562806 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
CHD9-207ENST00000562806 EVX2Q03828 476 aa8.04□□□□□ -1.12
CHD9-207ENST00000562806 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
CHD9-207ENST00000562806 RGL2O15211 777 aa8.02□□□□□ -1.13
CHD9-207ENST00000562806 PDAP1Q13442 181 aaKnown RBP8.02□□□□□ -1.13
CHD9-207ENST00000562806 IFNL1Q8IU54 200 aa8□□□□□ -1.13
CHD9-207ENST00000562806 GABBR2O75899 941 aa7.99□□□□□ -1.13
CHD9-207ENST00000562806 DCAF8L2P0C7V8 631 aa7.99□□□□□ -1.13
CHD9-207ENST00000562806 MS4A3Q96HJ5 214 aa7.99□□□□□ -1.13
CHD9-207ENST00000562806 TIE1P35590 1138 aa7.98□□□□□ -1.13
CHD9-207ENST00000562806 RNF25Q96BH1 459 aaPredicted RBP7.97□□□□□ -1.13
CHD9-207ENST00000562806 PCDHB8Q9UN66 801 aa7.97□□□□□ -1.13
CHD9-207ENST00000562806 PSEN1P49768 467 aa7.96□□□□□ -1.14
CHD9-207ENST00000562806 GALR2O43603 387 aaPredicted RBP7.95□□□□□ -1.14
CHD9-207ENST00000562806 DCBLD2Q96PD2 775 aa7.94□□□□□ -1.14
CHD9-207ENST00000562806 HS6ST3Q8IZP7 471 aa7.93□□□□□ -1.14
CHD9-207ENST00000562806 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.92□□□□□ -1.14
CHD9-207ENST00000562806 STK25O00506 426 aa7.92□□□□□ -1.14
CHD9-207ENST00000562806 ZFP91Q96JP5 570 aaPredicted RBP7.92□□□□□ -1.14
CHD9-207ENST00000562806 TMEM106CQ9BVX2 250 aa7.92□□□□□ -1.14
CHD9-207ENST00000562806 CHGAP10645 457 aaKnown RBP7.91□□□□□ -1.14
CHD9-207ENST00000562806 GOLGA2Q08379 1002 aa7.91□□□□□ -1.14
CHD9-207ENST00000562806 DNAJC5Q9H3Z4 198 aa7.9□□□□□ -1.14
CHD9-207ENST00000562806 ASTLQ6HA08 431 aaPredicted RBP7.89□□□□□ -1.15
CHD9-207ENST00000562806 BCL11BQ9C0K0 894 aaPredicted RBP7.89□□□□□ -1.15
CHD9-207ENST00000562806 RYDENQ9NUL5 291 aaKnown RBP7.89□□□□□ -1.15
CHD9-207ENST00000562806 STK24Q9Y6E0 443 aa7.89□□□□□ -1.15
CHD9-207ENST00000562806 TTLL13PA6NNM8 815 aa7.88□□□□□ -1.15
CHD9-207ENST00000562806 BMP2KQ9NSY1 1161 aaPredicted RBP7.88□□□□□ -1.15
CHD9-207ENST00000562806 MKRN3Q13064 507 aaKnown RBP7.87□□□□□ -1.15
CHD9-207ENST00000562806 BBXQ8WY36 941 aaPredicted RBP7.87□□□□□ -1.15
CHD9-207ENST00000562806 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.87□□□□□ -1.15
CHD9-207ENST00000562806 ATMINO43313 823 aaPredicted RBP7.86□□□□□ -1.15
CHD9-207ENST00000562806 IER5LQ5T953 404 aa7.86□□□□□ -1.15
CHD9-207ENST00000562806 SOX12O15370 315 aa7.85□□□□□ -1.15
CHD9-207ENST00000562806 CABP2Q9NPB3 220 aa7.84□□□□□ -1.15
CHD9-207ENST00000562806 TRIM35Q9UPQ4 493 aa7.84□□□□□ -1.15
CHD9-207ENST00000562806 TRPC6Q9Y210 931 aa7.84□□□□□ -1.15
CHD9-207ENST00000562806 SLC39A7Q92504 469 aa7.83□□□□□ -1.16
CHD9-207ENST00000562806 C7P10643 843 aa7.82□□□□□ -1.16
CHD9-207ENST00000562806 ATN1P54259 1190 aaPredicted RBP7.82□□□□□ -1.16
CHD9-207ENST00000562806 NLRP6P59044 892 aa7.8□□□□□ -1.16
CHD9-207ENST00000562806 EFCAB3Q8N7B9 438 aa7.79□□□□□ -1.16
CHD9-207ENST00000562806 SEC24BO95487 1268 aa7.76□□□□□ -1.17
CHD9-207ENST00000562806 PLCG2P16885 1265 aa7.76□□□□□ -1.17
CHD9-207ENST00000562806 SPRYD3Q8NCJ5 442 aa7.76□□□□□ -1.17
CHD9-207ENST00000562806 OCEL1Q9H607 264 aa7.76□□□□□ -1.17
CHD9-207ENST00000562806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.76□□□□□ -1.173e-7■■□□□ 13.5
CHD9-207ENST00000562806 POTEIP0CG38 1075 aa7.75□□□□□ -1.17
CHD9-207ENST00000562806 ILDR1Q86SU0 546 aaPredicted RBP7.74□□□□□ -1.17
CHD9-207ENST00000562806 IRX5P78411 483 aaPredicted RBP7.73□□□□□ -1.17
CHD9-207ENST00000562806 METRNQ9UJH8 293 aa7.73□□□□□ -1.17
CHD9-207ENST00000562806 PELP1Q8IZL8 1130 aaKnown RBP7.72□□□□□ -1.17
CHD9-207ENST00000562806 MFRPQ9BY79 579 aa7.72□□□□□ -1.17
CHD9-207ENST00000562806 G3V3G9 751 aa7.71□□□□□ -1.18
CHD9-207ENST00000562806 NKX1-1Q15270 411 aaPredicted RBP7.71□□□□□ -1.18
CHD9-207ENST00000562806 L3MBTL3Q96JM7 780 aaPredicted RBP7.71□□□□□ -1.18
CHD9-207ENST00000562806 PHF8Q9UPP1 1060 aa7.71□□□□□ -1.18
CHD9-207ENST00000562806 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
CHD9-207ENST00000562806 FBXO22Q8NEZ5 403 aa7.7□□□□□ -1.18
CHD9-207ENST00000562806 GTPBP6O43824 516 aaPredicted RBP7.69□□□□□ -1.18
CHD9-207ENST00000562806 PLCB2Q00722 1185 aa7.69□□□□□ -1.18
CHD9-207ENST00000562806 CFAP44Q96MT7 982 aa7.68□□□□□ -1.18
CHD9-207ENST00000562806 PDCD7Q8N8D1 485 aaKnown RBP7.67□□□□□ -1.18
CHD9-207ENST00000562806 MAMSTRQ6ZN01 415 aa7.64□□□□□ -1.19
CHD9-207ENST00000562806 MS4A4AQ96JQ5 239 aa7.64□□□□□ -1.19
CHD9-207ENST00000562806 COLQQ9Y215 455 aaPredicted RBP7.64□□□□□ -1.19
CHD9-207ENST00000562806 BOLA1Q9Y3E2 137 aa7.64□□□□□ -1.19
CHD9-207ENST00000562806 POTEFA5A3E0 1075 aa7.61□□□□□ -1.19
CHD9-207ENST00000562806 TMEM121BQ9BXQ6 578 aaPredicted RBP7.61□□□□□ -1.19
CHD9-207ENST00000562806 C3orf67Q6ZVT6 689 aa7.59□□□□□ -1.19
CHD9-207ENST00000562806 DPY19L2Q6NUT2 758 aa7.58□□□□□ -1.2
CHD9-207ENST00000562806 MICALL2Q8IY33 904 aa7.58□□□□□ -1.2
CHD9-207ENST00000562806 SCUBE2Q9NQ36 999 aa7.58□□□□□ -1.2
CHD9-207ENST00000562806 PPP1R37O75864 691 aa7.57□□□□□ -1.2
CHD9-207ENST00000562806 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.57□□□□□ -1.2
CHD9-207ENST00000562806 PDE4AP27815 886 aa7.55□□□□□ -1.2
CHD9-207ENST00000562806 HAP1P54257 671 aaPredicted RBP7.55□□□□□ -1.2
CHD9-207ENST00000562806 LHX8Q68G74 356 aa7.54□□□□□ -1.2
CHD9-207ENST00000562806 TMC2Q8TDI7 906 aa7.53□□□□□ -1.2
CHD9-207ENST00000562806 VSIG10Q8N0Z9 540 aa7.51□□□□□ -1.21
CHD9-207ENST00000562806 GPHNQ9NQX3 736 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms