RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 TRIM26Q12899 539 aaPredicted RBP7.22□□□□□ -1.25
TCF4-215ENST00000562638 EVX2Q03828 476 aa7.21□□□□□ -1.26
TCF4-215ENST00000562638 TAF7LQ5H9L4 462 aa7.2□□□□□ -1.26
TCF4-215ENST00000562638 CCDC136Q96JN2 1154 aa7.2□□□□□ -1.26
TCF4-215ENST00000562638 ATXN8OSP0DMR3 200 aa7.19□□□□□ -1.26
TCF4-215ENST00000562638 AAMPQ13685 434 aa7.19□□□□□ -1.26
TCF4-215ENST00000562638 DEKP35659 375 aaKnown RBP7.15□□□□□ -1.26
TCF4-215ENST00000562638 RSPH6AQ9H0K4 717 aa7.15□□□□□ -1.26
TCF4-215ENST00000562638 SPDYE2BA6NHP3 402 aa7.14□□□□□ -1.27
TCF4-215ENST00000562638 SPDYE6P0CI01 402 aa7.14□□□□□ -1.27
TCF4-215ENST00000562638 SPDYE2Q495Y8 402 aa7.14□□□□□ -1.27
TCF4-215ENST00000562638 BCL11BQ9C0K0 894 aaPredicted RBP7.14□□□□□ -1.27
TCF4-215ENST00000562638 SUPT16HQ9Y5B9 1047 aaKnown RBP7.14□□□□□ -1.27
TCF4-215ENST00000562638 MKRN4PQ13434 485 aaPredicted RBP7.12□□□□□ -1.27
TCF4-215ENST00000562638 FBLN2P98095 1184 aa7.11□□□□□ -1.27
TCF4-215ENST00000562638 RSPH4AQ5TD94 716 aa7.11□□□□□ -1.27
TCF4-215ENST00000562638 FANCIQ9NVI1 1328 aa7.1□□□□□ -1.27
TCF4-215ENST00000562638 DIEXFQ68CQ4 756 aaKnown RBP7.1□□□□□ -1.27
TCF4-215ENST00000562638 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
TCF4-215ENST00000562638 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
TCF4-215ENST00000562638 PRKAR2AP13861 404 aaKnown RBP7.09□□□□□ -1.27
TCF4-215ENST00000562638 GLIPR1L2Q4G1C9 344 aa7.09□□□□□ -1.27
TCF4-215ENST00000562638 RBM10P98175 930 aaKnown RBP7.08□□□□□ -1.28
TCF4-215ENST00000562638 TRIM41Q8WV44 630 aa7.08□□□□□ -1.28
TCF4-215ENST00000562638 CLEC11AQ9Y240 323 aa7.08□□□□□ -1.28
TCF4-215ENST00000562638 BRD2P25440 801 aaKnown RBP7.07□□□□□ -1.28
TCF4-215ENST00000562638 AMER1Q5JTC6 1135 aaPredicted RBP7.06□□□□□ -1.28
TCF4-215ENST00000562638 SPDYE1Q8NFV5 336 aaPredicted RBP7.06□□□□□ -1.28
TCF4-215ENST00000562638 ZNF692Q9BU19 519 aaPredicted RBP7.06□□□□□ -1.28
TCF4-215ENST00000562638 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.05□□□□□ -1.28
TCF4-215ENST00000562638 SSUH2Q9Y2M2 353 aa7.05□□□□□ -1.28
TCF4-215ENST00000562638 C19orf67A6NJJ6 358 aa7.04□□□□□ -1.28
TCF4-215ENST00000562638 RBM19Q9Y4C8 960 aaKnown RBP7.04□□□□□ -1.28
TCF4-215ENST00000562638 C11orf95C9JLR9 678 aaPredicted RBP7.03□□□□□ -1.28
TCF4-215ENST00000562638 NPM2Q86SE8 214 aaKnown RBP7.02□□□□□ -1.29
TCF4-215ENST00000562638 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
TCF4-215ENST00000562638 CHMP4AQ9BY43 222 aa7.01□□□□□ -1.29
TCF4-215ENST00000562638 GABBR2O75899 941 aa7□□□□□ -1.29
TCF4-215ENST00000562638 CHADLQ6NUI6 762 aa7□□□□□ -1.29
TCF4-215ENST00000562638 FBXO3Q9UK99 471 aa7□□□□□ -1.29
TCF4-215ENST00000562638 A0A0U1RQG5 324 aaPredicted RBP6.99□□□□□ -1.29
TCF4-215ENST00000562638 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
TCF4-215ENST00000562638 LOC105371045A0A1W2PR82 267 aa6.97□□□□□ -1.29
TCF4-215ENST00000562638 EHMT2Q96KQ7 1210 aa6.97□□□□□ -1.29
TCF4-215ENST00000562638 PABPN1Q86U42 306 aaKnown RBP eCLIP6.95□□□□□ -1.3
TCF4-215ENST00000562638 VSIG10Q8N0Z9 540 aa6.95□□□□□ -1.3
TCF4-215ENST00000562638 PRR29P0C7W0 189 aa6.94□□□□□ -1.3
TCF4-215ENST00000562638 TAOK2Q9UL54 1235 aa6.94□□□□□ -1.3
TCF4-215ENST00000562638 DHX37Q8IY37 1157 aaKnown RBP6.92□□□□□ -1.3
TCF4-215ENST00000562638 CDK11AQ9UQ88 783 aaPredicted RBP6.92□□□□□ -1.3
TCF4-215ENST00000562638 CHRM1P11229 460 aaPredicted RBP6.91□□□□□ -1.3
TCF4-215ENST00000562638 LHX8Q68G74 356 aa6.91□□□□□ -1.3
TCF4-215ENST00000562638 BCCIPQ9P287 314 aaKnown RBP eCLIP6.91□□□□□ -1.3
TCF4-215ENST00000562638 WASHC2CQ9Y4E1 1318 aa6.91□□□□□ -1.3
TCF4-215ENST00000562638 PAXIP1Q6ZW49 1069 aaPredicted RBP6.89□□□□□ -1.31
TCF4-215ENST00000562638 IPO4Q8TEX9 1081 aaKnown RBP6.89□□□□□ -1.31
TCF4-215ENST00000562638 WASHC2AQ641Q2 1341 aa6.88□□□□□ -1.31
TCF4-215ENST00000562638 POTEIP0CG38 1075 aa6.88□□□□□ -1.31
TCF4-215ENST00000562638 NAP1L5Q96NT1 182 aaPredicted RBP6.88□□□□□ -1.31
TCF4-215ENST00000562638 NAP1L2Q9ULW6 460 aaPredicted RBP6.88□□□□□ -1.31
TCF4-215ENST00000562638 ZNF316A6NFI3 1004 aaPredicted RBP6.87□□□□□ -1.31
TCF4-215ENST00000562638 RRP9O43818 475 aaKnown RBP6.87□□□□□ -1.31
TCF4-215ENST00000562638 HSP90B1P14625 803 aaKnown RBP6.87□□□□□ -1.31
TCF4-215ENST00000562638 C14orf37Q86TY3 774 aa6.87□□□□□ -1.31
TCF4-215ENST00000562638 FARP1Q9Y4F1 1045 aaPredicted RBP6.86□□□□□ -1.31
TCF4-215ENST00000562638 PRDM4Q9UKN5 801 aa6.85□□□□□ -1.31
TCF4-215ENST00000562638 CENPJQ9HC77 1338 aaPredicted RBP6.84□□□□□ -1.31
TCF4-215ENST00000562638 CD44P16070 742 aaKnown RBP6.84□□□□□ -1.31
TCF4-215ENST00000562638 TEX2Q8IWB9 1127 aa6.84□□□□□ -1.31
TCF4-215ENST00000562638 MIER1Q8N108 512 aa6.84□□□□□ -1.31
TCF4-215ENST00000562638 NISCHQ9Y2I1 1504 aa6.84□□□□□ -1.31
TCF4-215ENST00000562638 DCAF8L2P0C7V8 631 aa6.83□□□□□ -1.32
TCF4-215ENST00000562638 GTF2E1P29083 439 aaPredicted RBP6.83□□□□□ -1.32
TCF4-215ENST00000562638 CALD1Q05682 793 aaKnown RBP6.83□□□□□ -1.32
TCF4-215ENST00000562638 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
TCF4-215ENST00000562638 HAP1P54257 671 aaPredicted RBP6.82□□□□□ -1.32
TCF4-215ENST00000562638 FAM43AQ8N2R8 423 aa6.8□□□□□ -1.32
TCF4-215ENST00000562638 CDK11BP21127 795 aaKnown RBP6.79□□□□□ -1.32
TCF4-215ENST00000562638 CCER1Q8TC90 406 aaPredicted RBP6.79□□□□□ -1.32
TCF4-215ENST00000562638 VGFO15240 615 aaPredicted RBP6.78□□□□□ -1.32
TCF4-215ENST00000562638 ZFP91Q96JP5 570 aaPredicted RBP6.78□□□□□ -1.32
TCF4-215ENST00000562638 STAC3Q96MF2 364 aa6.78□□□□□ -1.32
TCF4-215ENST00000562638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.77□□□□□ -1.33
TCF4-215ENST00000562638 FTSJ3Q8IY81 847 aaKnown RBP6.76□□□□□ -1.33
TCF4-215ENST00000562638 BBXQ8WY36 941 aaPredicted RBP6.76□□□□□ -1.33
TCF4-215ENST00000562638 CHMP4BQ9H444 224 aaKnown RBP6.76□□□□□ -1.33
TCF4-215ENST00000562638 USP35Q9P2H5 1018 aa6.76□□□□□ -1.33
TCF4-215ENST00000562638 NOP58Q9Y2X3 529 aaKnown RBP6.76□□□□□ -1.33
TCF4-215ENST00000562638 CLCN6P51797 869 aa6.75□□□□□ -1.33
TCF4-215ENST00000562638 TPRNQ4KMQ1 711 aa6.75□□□□□ -1.33
TCF4-215ENST00000562638 BCANQ96GW7 911 aa6.75□□□□□ -1.33
TCF4-215ENST00000562638 CREBZFQ9NS37 354 aa6.75□□□□□ -1.33
TCF4-215ENST00000562638 HSP90AA2PQ14568 343 aaPredicted RBP6.74□□□□□ -1.33
TCF4-215ENST00000562638 ARID4BQ4LE39 1312 aaPredicted RBP6.74□□□□□ -1.33
TCF4-215ENST00000562638 SECISBP2LQ93073 1101 aaKnown RBP6.73□□□□□ -1.33
TCF4-215ENST00000562638 CANXP27824 592 aaKnown RBP6.72□□□□□ -1.33
TCF4-215ENST00000562638 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
TCF4-215ENST00000562638 ZNF579Q8NAF0 562 aaKnown RBP6.72□□□□□ -1.33
TCF4-215ENST00000562638 DCBLD2Q96PD2 775 aa6.72□□□□□ -1.33
TCF4-215ENST00000562638 ARID3AQ99856 593 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms