RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 HAX1O00165 279 aa13.21□□□□□ -0.29
USP8-218ENST00000561330 PKD2Q13563 968 aa13.21□□□□□ -0.29
USP8-218ENST00000561330 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
USP8-218ENST00000561330 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
USP8-218ENST00000561330 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
USP8-218ENST00000561330 CCDC61Q9Y6R9 512 aa13.12□□□□□ -0.31
USP8-218ENST00000561330 PYGBP11216 843 aa13.09□□□□□ -0.31
USP8-218ENST00000561330 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
USP8-218ENST00000561330 EVX2Q03828 476 aa13.05□□□□□ -0.32
USP8-218ENST00000561330 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
USP8-218ENST00000561330 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
USP8-218ENST00000561330 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
USP8-218ENST00000561330 RGL2O15211 777 aa12.99□□□□□ -0.33
USP8-218ENST00000561330 SP7Q8TDD2 431 aaPredicted RBP12.99□□□□□ -0.33
USP8-218ENST00000561330 MAP3K13O43283 966 aa12.97□□□□□ -0.33
USP8-218ENST00000561330 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
USP8-218ENST00000561330 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
USP8-218ENST00000561330 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
USP8-218ENST00000561330 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
USP8-218ENST00000561330 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
USP8-218ENST00000561330 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
USP8-218ENST00000561330 CLCN6P51797 869 aa12.92□□□□□ -0.34
USP8-218ENST00000561330 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
USP8-218ENST00000561330 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
USP8-218ENST00000561330 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
USP8-218ENST00000561330 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
USP8-218ENST00000561330 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
USP8-218ENST00000561330 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
USP8-218ENST00000561330 GABBR2O75899 941 aa12.83□□□□□ -0.36
USP8-218ENST00000561330 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
USP8-218ENST00000561330 PSEN1P49768 467 aa12.79□□□□□ -0.36
USP8-218ENST00000561330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
USP8-218ENST00000561330 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
USP8-218ENST00000561330 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
USP8-218ENST00000561330 STK25O00506 426 aa12.75□□□□□ -0.37
USP8-218ENST00000561330 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
USP8-218ENST00000561330 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
USP8-218ENST00000561330 TIE1P35590 1138 aa12.72□□□□□ -0.37
USP8-218ENST00000561330 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
USP8-218ENST00000561330 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
USP8-218ENST00000561330 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
USP8-218ENST00000561330 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
USP8-218ENST00000561330 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
USP8-218ENST00000561330 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
USP8-218ENST00000561330 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
USP8-218ENST00000561330 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
USP8-218ENST00000561330 BBXQ8WY36 941 aaPredicted RBP12.62□□□□□ -0.39
USP8-218ENST00000561330 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
USP8-218ENST00000561330 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
USP8-218ENST00000561330 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
USP8-218ENST00000561330 DNAJC5Q9H3Z4 198 aa12.59□□□□□ -0.39
USP8-218ENST00000561330 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
USP8-218ENST00000561330 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
USP8-218ENST00000561330 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
USP8-218ENST00000561330 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
USP8-218ENST00000561330 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
USP8-218ENST00000561330 SOX12O15370 315 aa12.52□□□□□ -0.41
USP8-218ENST00000561330 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
USP8-218ENST00000561330 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
USP8-218ENST00000561330 IER5LQ5T953 404 aa12.49□□□□□ -0.41
USP8-218ENST00000561330 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
USP8-218ENST00000561330 NLRP6P59044 892 aa12.46□□□□□ -0.41
USP8-218ENST00000561330 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
USP8-218ENST00000561330 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
USP8-218ENST00000561330 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.41
USP8-218ENST00000561330 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
USP8-218ENST00000561330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.424e-8■■■■■ 28.5
USP8-218ENST00000561330 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
USP8-218ENST00000561330 C7P10643 843 aa12.44□□□□□ -0.42
USP8-218ENST00000561330 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
USP8-218ENST00000561330 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
USP8-218ENST00000561330 SEC24BO95487 1268 aa12.41□□□□□ -0.42
USP8-218ENST00000561330 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
USP8-218ENST00000561330 OCEL1Q9H607 264 aa12.41□□□□□ -0.42
USP8-218ENST00000561330 PLCG2P16885 1265 aa12.4□□□□□ -0.42
USP8-218ENST00000561330 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.42
USP8-218ENST00000561330 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
USP8-218ENST00000561330 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
USP8-218ENST00000561330 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
USP8-218ENST00000561330 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
USP8-218ENST00000561330 COLQQ9Y215 455 aaPredicted RBP12.35□□□□□ -0.43
USP8-218ENST00000561330 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
USP8-218ENST00000561330 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
USP8-218ENST00000561330 PPP1R37O75864 691 aa12.3□□□□□ -0.44
USP8-218ENST00000561330 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
USP8-218ENST00000561330 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
USP8-218ENST00000561330 G3V3G9 751 aa12.25□□□□□ -0.45
USP8-218ENST00000561330 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
USP8-218ENST00000561330 BOLA1Q9Y3E2 137 aa12.23□□□□□ -0.45
USP8-218ENST00000561330 LHX8Q68G74 356 aa12.21□□□□□ -0.45
USP8-218ENST00000561330 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
USP8-218ENST00000561330 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
USP8-218ENST00000561330 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
USP8-218ENST00000561330 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
USP8-218ENST00000561330 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
USP8-218ENST00000561330 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
USP8-218ENST00000561330 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
USP8-218ENST00000561330 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
USP8-218ENST00000561330 MAMSTRQ6ZN01 415 aa12.08□□□□□ -0.48
USP8-218ENST00000561330 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms