RNA–Protein interactions for RNA: ENST00000559825.1

AC023906.3-201, humanhuman

TSL 5 BASIC

Gene AC023906.3, Length 874 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023906.3-201ENST00000559825 RNF25Q96BH1 459 aaPredicted RBP16.03■□□□□ 0.16
AC023906.3-201ENST00000559825 NKX1-1Q15270 411 aaPredicted RBP15.98■□□□□ 0.15
AC023906.3-201ENST00000559825 GTPBP6O43824 516 aaPredicted RBP15.95■□□□□ 0.14
AC023906.3-201ENST00000559825 RIOK3O14730 519 aaKnown RBP15.94■□□□□ 0.14
AC023906.3-201ENST00000559825 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
AC023906.3-201ENST00000559825 TULP1O00294 542 aaPredicted RBP15.91■□□□□ 0.14
AC023906.3-201ENST00000559825 NUBP1P53384 320 aa15.9■□□□□ 0.14
AC023906.3-201ENST00000559825 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
AC023906.3-201ENST00000559825 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
AC023906.3-201ENST00000559825 STK25O00506 426 aa15.84■□□□□ 0.13
AC023906.3-201ENST00000559825 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
AC023906.3-201ENST00000559825 ERICH6Q7L0X2 663 aa15.75■□□□□ 0.11
AC023906.3-201ENST00000559825 FAM212AQ96EL1 285 aa15.74■□□□□ 0.11
AC023906.3-201ENST00000559825 RYDENQ9NUL5 291 aaKnown RBP15.72■□□□□ 0.11
AC023906.3-201ENST00000559825 TMEM132AQ24JP5 1023 aa15.71■□□□□ 0.11
AC023906.3-201ENST00000559825 CHRM1P11229 460 aaPredicted RBP15.7■□□□□ 0.1
AC023906.3-201ENST00000559825 SGIP1Q9BQI5 828 aa15.69■□□□□ 0.1
AC023906.3-201ENST00000559825 STK24Q9Y6E0 443 aa15.69■□□□□ 0.1
AC023906.3-201ENST00000559825 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
AC023906.3-201ENST00000559825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.65■□□□□ 0.1
AC023906.3-201ENST00000559825 ZFP91Q96JP5 570 aaPredicted RBP15.65■□□□□ 0.1
AC023906.3-201ENST00000559825 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
AC023906.3-201ENST00000559825 SPDYE1Q8NFV5 336 aaPredicted RBP15.6■□□□□ 0.09
AC023906.3-201ENST00000559825 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
AC023906.3-201ENST00000559825 MNX1P50219 401 aaPredicted RBP15.58■□□□□ 0.08
AC023906.3-201ENST00000559825 ARXQ96QS3 562 aa15.57■□□□□ 0.08
AC023906.3-201ENST00000559825 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
AC023906.3-201ENST00000559825 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
AC023906.3-201ENST00000559825 PYGBP11216 843 aa15.51■□□□□ 0.07
AC023906.3-201ENST00000559825 WDR70Q9NW82 654 aa15.51■□□□□ 0.07
AC023906.3-201ENST00000559825 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
AC023906.3-201ENST00000559825 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
AC023906.3-201ENST00000559825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.48■□□□□ 0.07
AC023906.3-201ENST00000559825 KCNV2Q8TDN2 545 aa15.46■□□□□ 0.07
AC023906.3-201ENST00000559825 C14orf37Q86TY3 774 aa15.45■□□□□ 0.06
AC023906.3-201ENST00000559825 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
AC023906.3-201ENST00000559825 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
AC023906.3-201ENST00000559825 NISCHQ9Y2I1 1504 aa15.38■□□□□ 0.05
AC023906.3-201ENST00000559825 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
AC023906.3-201ENST00000559825 BRPF1P55201 1214 aaPredicted RBP15.31■□□□□ 0.04
AC023906.3-201ENST00000559825 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
AC023906.3-201ENST00000559825 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
AC023906.3-201ENST00000559825 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
AC023906.3-201ENST00000559825 HOMEZQ8IX15 550 aa15.27■□□□□ 0.04
AC023906.3-201ENST00000559825 PDAP1Q13442 181 aaKnown RBP15.25■□□□□ 0.03
AC023906.3-201ENST00000559825 POTEHQ6S545 545 aa15.25■□□□□ 0.03
AC023906.3-201ENST00000559825 ARHGEF1Q92888 912 aaKnown RBP15.24■□□□□ 0.03
AC023906.3-201ENST00000559825 ZC3H15Q8WU90 426 aaKnown RBP15.23■□□□□ 0.03
AC023906.3-201ENST00000559825 MFRPQ9BY79 579 aa15.19■□□□□ 0.02
AC023906.3-201ENST00000559825 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
AC023906.3-201ENST00000559825 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
AC023906.3-201ENST00000559825 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
AC023906.3-201ENST00000559825 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
AC023906.3-201ENST00000559825 E2F4Q16254 413 aa15.15■□□□□ 0.02
AC023906.3-201ENST00000559825 SLC24A3Q9HC58 644 aa15.13■□□□□ 0.01
AC023906.3-201ENST00000559825 TESPA1A2RU30 521 aaPredicted RBP15.12■□□□□ 0.01
AC023906.3-201ENST00000559825 PSEN1P49768 467 aa15.12■□□□□ 0.01
AC023906.3-201ENST00000559825 SEMA3EO15041 775 aa15.11■□□□□ 0.01
AC023906.3-201ENST00000559825 PPP1R37O75864 691 aa15.09■□□□□ 0.01
AC023906.3-201ENST00000559825 PITPNM1O00562 1244 aa15.08■□□□□ 0
AC023906.3-201ENST00000559825 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
AC023906.3-201ENST00000559825 NLRP6P59044 892 aa15.02■□□□□ -0
AC023906.3-201ENST00000559825 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
AC023906.3-201ENST00000559825 ZMYND10O75800 440 aa15□□□□□ -0.01
AC023906.3-201ENST00000559825 SMYD5Q6GMV2 418 aa15□□□□□ -0.01
AC023906.3-201ENST00000559825 CHADLQ6NUI6 762 aa15□□□□□ -0.01
AC023906.3-201ENST00000559825 FBXO22Q8NEZ5 403 aa15□□□□□ -0.01
AC023906.3-201ENST00000559825 EFCAB3Q8N7B9 438 aa14.98□□□□□ -0.01
AC023906.3-201ENST00000559825 CCDC61Q9Y6R9 512 aa14.98□□□□□ -0.01
AC023906.3-201ENST00000559825 SOX12O15370 315 aa14.97□□□□□ -0.01
AC023906.3-201ENST00000559825 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
AC023906.3-201ENST00000559825 PHF8Q9UPP1 1060 aa14.95□□□□□ -0.02
AC023906.3-201ENST00000559825 CABP2Q9NPB3 220 aa14.93□□□□□ -0.02
AC023906.3-201ENST00000559825 LARP6Q9BRS8 491 aaKnown RBP14.92□□□□□ -0.02
AC023906.3-201ENST00000559825 NCKAP5LQ9HCH0 1330 aa14.91□□□□□ -0.02
AC023906.3-201ENST00000559825 PDE4AP27815 886 aa14.9□□□□□ -0.02
AC023906.3-201ENST00000559825 BARGINQ6ZT62 677 aa14.89□□□□□ -0.03
AC023906.3-201ENST00000559825 IFNL1Q8IU54 200 aa14.89□□□□□ -0.03
AC023906.3-201ENST00000559825 MFSD10Q14728 455 aa14.85□□□□□ -0.03
AC023906.3-201ENST00000559825 ARIH1Q9Y4X5 557 aaPredicted RBP14.85□□□□□ -0.03
AC023906.3-201ENST00000559825 AK7Q96M32 723 aa14.82□□□□□ -0.04
AC023906.3-201ENST00000559825 DDX27Q96GQ7 796 aaKnown RBP14.81□□□□□ -0.04
AC023906.3-201ENST00000559825 MAP3K13O43283 966 aa14.79□□□□□ -0.04
AC023906.3-201ENST00000559825 CRISPLD2Q9H0B8 497 aa14.79□□□□□ -0.04
AC023906.3-201ENST00000559825 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
AC023906.3-201ENST00000559825 KRI1Q8N9T8 703 aaKnown RBP14.76□□□□□ -0.05
AC023906.3-201ENST00000559825 KIF12Q96FN5 646 aa14.76□□□□□ -0.05
AC023906.3-201ENST00000559825 CAMK2BQ13554 666 aa14.75□□□□□ -0.05
AC023906.3-201ENST00000559825 GPBP1L1Q9HC44 474 aaPredicted RBP14.75□□□□□ -0.05
AC023906.3-201ENST00000559825 MS4A4AQ96JQ5 239 aa14.74□□□□□ -0.05
AC023906.3-201ENST00000559825 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
AC023906.3-201ENST00000559825 RBM26Q5T8P6 1007 aaKnown RBP14.73□□□□□ -0.05
AC023906.3-201ENST00000559825 GPIHBP1Q8IV16 184 aa14.73□□□□□ -0.05
AC023906.3-201ENST00000559825 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
AC023906.3-201ENST00000559825 MLLT3P42568 568 aaPredicted RBP14.69□□□□□ -0.06
AC023906.3-201ENST00000559825 ZMYND15Q9H091 742 aa14.69□□□□□ -0.06
AC023906.3-201ENST00000559825 KDM4CQ9H3R0 1056 aa14.67□□□□□ -0.06
AC023906.3-201ENST00000559825 TRIM66O15016 1216 aa14.63□□□□□ -0.07
AC023906.3-201ENST00000559825 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
AC023906.3-201ENST00000559825 PDE4DQ08499 809 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms