RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 NCBP3Q53F19 620 aaKnown RBP7.03□□□□□ -1.28
ZEB1-212ENST00000558655 PPP4R3CPQ6ZMV5 832 aa7.03□□□□□ -1.28
ZEB1-212ENST00000558655 PCF11O94913 1555 aaKnown RBP7.02□□□□□ -1.29
ZEB1-212ENST00000558655 KCNA4P22459 653 aa7.02□□□□□ -1.29
ZEB1-212ENST00000558655 PCDH10Q9P2E7 1040 aa7□□□□□ -1.29
ZEB1-212ENST00000558655 GLI2P10070 1586 aa7□□□□□ -1.29
ZEB1-212ENST00000558655 BIVM-ERCC5R4GMW8 1640 aa6.99□□□□□ -1.29
ZEB1-212ENST00000558655 SNAPC4Q5SXM2 1469 aa6.99□□□□□ -1.29
ZEB1-212ENST00000558655 FANCD2Q9BXW9 1451 aa6.99□□□□□ -1.29
ZEB1-212ENST00000558655 ZNF608Q9ULD9 1512 aaPredicted RBP6.98□□□□□ -1.29
ZEB1-212ENST00000558655 URB2Q14146 1524 aaKnown RBP6.96□□□□□ -1.29
ZEB1-212ENST00000558655 MAGI1Q96QZ7 1491 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-212ENST00000558655 DNMBPQ6XZF7 1577 aa6.96□□□□□ -1.3
ZEB1-212ENST00000558655 KIAA0586Q9BVV6 1533 aa6.95□□□□□ -1.3
ZEB1-212ENST00000558655 LTBP4Q8N2S1 1624 aa6.95□□□□□ -1.3
ZEB1-212ENST00000558655 MED1Q15648 1581 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-212ENST00000558655 CUX1P39880 1505 aa6.92□□□□□ -1.3
ZEB1-212ENST00000558655 SHROOM2Q13796 1616 aa6.92□□□□□ -1.3
ZEB1-212ENST00000558655 ADAMTSL3P82987 1691 aa6.91□□□□□ -1.3
ZEB1-212ENST00000558655 TOPBP1Q92547 1522 aa6.91□□□□□ -1.3
ZEB1-212ENST00000558655 WRNQ14191 1432 aaPredicted RBP eCLIP6.9□□□□□ -1.31
ZEB1-212ENST00000558655 PRKCSHP14314 528 aaPredicted RBP6.9□□□□□ -1.31
ZEB1-212ENST00000558655 AMER1Q5JTC6 1135 aaPredicted RBP6.9□□□□□ -1.31
ZEB1-212ENST00000558655 TEX14Q8IWB6 1497 aa6.89□□□□□ -1.31
ZEB1-212ENST00000558655 TARBP1Q13395 1621 aaKnown RBP6.89□□□□□ -1.31
ZEB1-212ENST00000558655 DMRT2Q9Y5R5 561 aa6.88□□□□□ -1.31
ZEB1-212ENST00000558655 PTPRTO14522 1441 aa6.86□□□□□ -1.31
ZEB1-212ENST00000558655 PPRC1Q5VV67 1664 aaKnown RBP6.85□□□□□ -1.31
ZEB1-212ENST00000558655 POLA1P09884 1462 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-212ENST00000558655 FGD5Q6ZNL6 1462 aa6.85□□□□□ -1.31
ZEB1-212ENST00000558655 APLP2Q06481 763 aa6.85□□□□□ -1.31
ZEB1-212ENST00000558655 CSRNP3Q8WYN3 585 aa6.84□□□□□ -1.31
ZEB1-212ENST00000558655 ABCA5Q8WWZ7 1642 aa6.84□□□□□ -1.32
ZEB1-212ENST00000558655 ABCA10Q8WWZ4 1543 aa6.83□□□□□ -1.32
ZEB1-212ENST00000558655 CFAP43Q8NDM7 1665 aa6.82□□□□□ -1.32
ZEB1-212ENST00000558655 PTPRMP28827 1452 aa6.82□□□□□ -1.32
ZEB1-212ENST00000558655 SCAF1Q9H7N4 1312 aaKnown RBP6.81□□□□□ -1.32
ZEB1-212ENST00000558655 PBRM1Q86U86 1689 aa6.81□□□□□ -1.32
ZEB1-212ENST00000558655 TTBK1Q5TCY1 1321 aaPredicted RBP6.8□□□□□ -1.32
ZEB1-212ENST00000558655 EEA1Q15075 1411 aa6.79□□□□□ -1.32
ZEB1-212ENST00000558655 FAM69CQ0P6D2 419 aa6.79□□□□□ -1.32
ZEB1-212ENST00000558655 SOGA1O94964 1423 aa6.78□□□□□ -1.32
ZEB1-212ENST00000558655 NPM3O75607 178 aaKnown RBP6.78□□□□□ -1.32
ZEB1-212ENST00000558655 CUL7Q14999 1698 aa6.77□□□□□ -1.32
ZEB1-212ENST00000558655 CEP170Q5SW79 1584 aa6.77□□□□□ -1.33
ZEB1-212ENST00000558655 ERICH3Q5RHP9 1530 aa6.77□□□□□ -1.33
ZEB1-212ENST00000558655 RAD54L2Q9Y4B4 1467 aa6.77□□□□□ -1.33
ZEB1-212ENST00000558655 MAP3K4Q9Y6R4 1608 aa6.77□□□□□ -1.33
ZEB1-212ENST00000558655 SLC34A2O95436 690 aa6.76□□□□□ -1.33
ZEB1-212ENST00000558655 MYT1Q01538 1121 aa6.76□□□□□ -1.33
ZEB1-212ENST00000558655 CNKSR2Q8WXI2 1034 aa6.76□□□□□ -1.33
ZEB1-212ENST00000558655 TIMELESSQ9UNS1 1208 aa6.75□□□□□ -1.33
ZEB1-212ENST00000558655 PELP1Q8IZL8 1130 aaKnown RBP6.75□□□□□ -1.33
ZEB1-212ENST00000558655 KIF27Q86VH2 1401 aa6.75□□□□□ -1.33
ZEB1-212ENST00000558655 BCORL1Q5H9F3 1711 aa6.74□□□□□ -1.33
ZEB1-212ENST00000558655 KIF21BO75037 1637 aa6.74□□□□□ -1.33
ZEB1-212ENST00000558655 ADAMTS12P58397 1594 aa6.74□□□□□ -1.33
ZEB1-212ENST00000558655 GRIN2BQ13224 1484 aa6.74□□□□□ -1.33
ZEB1-212ENST00000558655 PLB1Q6P1J6 1458 aa6.74□□□□□ -1.33
ZEB1-212ENST00000558655 NPM1P06748 294 aaKnown RBP eCLIP6.74□□□□□ -1.33
ZEB1-212ENST00000558655 ARXQ96QS3 562 aa6.73□□□□□ -1.33
ZEB1-212ENST00000558655 PREX1Q8TCU6 1659 aa6.73□□□□□ -1.33
ZEB1-212ENST00000558655 YEATS2Q9ULM3 1422 aa6.72□□□□□ -1.33
ZEB1-212ENST00000558655 EPRSP07814 1512 aaKnown RBP6.71□□□□□ -1.33
ZEB1-212ENST00000558655 TSPOAP1O95153 1857 aa6.71□□□□□ -1.34
ZEB1-212ENST00000558655 NUP160Q12769 1436 aa6.7□□□□□ -1.34
ZEB1-212ENST00000558655 PRXQ9BXM0 1461 aa6.7□□□□□ -1.34
ZEB1-212ENST00000558655 ERICH6Q7L0X2 663 aa6.7□□□□□ -1.34
ZEB1-212ENST00000558655 RUSC2Q8N2Y8 1516 aa6.7□□□□□ -1.34
ZEB1-212ENST00000558655 SLC4A1APQ9BWU0 796 aaKnown RBP6.7□□□□□ -1.34
ZEB1-212ENST00000558655 PHLDB1Q86UU1 1377 aa6.7□□□□□ -1.34
ZEB1-212ENST00000558655 IGF1RP08069 1367 aa6.69□□□□□ -1.34
ZEB1-212ENST00000558655 AQRO60306 1485 aaKnown RBP eCLIP6.68□□□□□ -1.34
ZEB1-212ENST00000558655 LRP5O75197 1615 aa6.68□□□□□ -1.34
ZEB1-212ENST00000558655 FHAD1B1AJZ9 1412 aa6.68□□□□□ -1.34
ZEB1-212ENST00000558655 CTTNBP2Q8WZ74 1663 aa6.68□□□□□ -1.34
ZEB1-212ENST00000558655 TDRD9Q8NDG6 1382 aaKnown RBP6.67□□□□□ -1.34
ZEB1-212ENST00000558655 CHMP7Q8WUX9 453 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-212ENST00000558655 ADCY10Q96PN6 1610 aa6.67□□□□□ -1.34
ZEB1-212ENST00000558655 RAPGEF2Q9Y4G8 1499 aa6.65□□□□□ -1.34
ZEB1-212ENST00000558655 MAGI3Q5TCQ9 1506 aa6.65□□□□□ -1.34
ZEB1-212ENST00000558655 STRCQ7RTU9 1775 aa6.65□□□□□ -1.35
ZEB1-212ENST00000558655 GRIN2AQ12879 1464 aa6.64□□□□□ -1.35
ZEB1-212ENST00000558655 CARMIL1Q5VZK9 1371 aa6.63□□□□□ -1.35
ZEB1-212ENST00000558655 GOLGA3Q08378 1498 aa6.63□□□□□ -1.35
ZEB1-212ENST00000558655 TULP1O00294 542 aaPredicted RBP6.63□□□□□ -1.35
ZEB1-212ENST00000558655 ARAP3Q8WWN8 1544 aa6.63□□□□□ -1.35
ZEB1-212ENST00000558655 HOXD11P31277 338 aaPredicted RBP6.63□□□□□ -1.35
ZEB1-212ENST00000558655 TTC37Q6PGP7 1564 aa6.62□□□□□ -1.35
ZEB1-212ENST00000558655 RNF216Q9NWF9 866 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-212ENST00000558655 TAOK2Q9UL54 1235 aa6.61□□□□□ -1.35
ZEB1-212ENST00000558655 UHRF1BP1LA0JNW5 1464 aa6.61□□□□□ -1.35
ZEB1-212ENST00000558655 CDK12Q9NYV4 1490 aaPredicted RBP6.6□□□□□ -1.35
ZEB1-212ENST00000558655 MADDQ8WXG6 1647 aa6.6□□□□□ -1.35
ZEB1-212ENST00000558655 UGGT2Q9NYU1 1516 aa6.59□□□□□ -1.35
ZEB1-212ENST00000558655 IQGAP2Q13576 1575 aa6.59□□□□□ -1.35
ZEB1-212ENST00000558655 SAMD9Q5K651 1589 aa6.59□□□□□ -1.35
ZEB1-212ENST00000558655 COL17A1Q9UMD9 1497 aaPredicted RBP6.58□□□□□ -1.36
ZEB1-212ENST00000558655 DCAF8L1A6NGE4 600 aa6.58□□□□□ -1.36
ZEB1-212ENST00000558655 TNIKQ9UKE5 1360 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms