RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 SP7Q8TDD2 431 aaPredicted RBP9.11□□□□□ -0.95
NUMB-220ENST00000556112 ZNF579Q8NAF0 562 aaKnown RBP9.1□□□□□ -0.95
NUMB-220ENST00000556112 GSE1Q14687 1217 aa9.09□□□□□ -0.95
NUMB-220ENST00000556112 CIZ1Q9ULV3 898 aaPredicted RBP9.09□□□□□ -0.95
NUMB-220ENST00000556112 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
NUMB-220ENST00000556112 PHF12Q96QT6 1004 aa9.08□□□□□ -0.96
NUMB-220ENST00000556112 GABBR2O75899 941 aa9.03□□□□□ -0.96
NUMB-220ENST00000556112 PYGBP11216 843 aa9.03□□□□□ -0.96
NUMB-220ENST00000556112 CLCN6P51797 869 aa9.02□□□□□ -0.97
NUMB-220ENST00000556112 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
NUMB-220ENST00000556112 CCDC180Q9P1Z9 1646 aa9□□□□□ -0.97
NUMB-220ENST00000556112 MAP3K13O43283 966 aa8.99□□□□□ -0.97
NUMB-220ENST00000556112 AMER1Q5JTC6 1135 aaPredicted RBP8.98□□□□□ -0.97
NUMB-220ENST00000556112 GALR2O43603 387 aaPredicted RBP8.97□□□□□ -0.97
NUMB-220ENST00000556112 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
NUMB-220ENST00000556112 MS4A3Q96HJ5 214 aa8.96□□□□□ -0.98
NUMB-220ENST00000556112 PCDHB13Q9Y5F0 798 aa8.96□□□□□ -0.98
NUMB-220ENST00000556112 CHRM1P11229 460 aaPredicted RBP8.95□□□□□ -0.98
NUMB-220ENST00000556112 SGIP1Q9BQI5 828 aa8.94□□□□□ -0.98
NUMB-220ENST00000556112 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
NUMB-220ENST00000556112 PKD2Q13563 968 aa8.93□□□□□ -0.98
NUMB-220ENST00000556112 ECM2O94769 699 aaPredicted RBP8.92□□□□□ -0.98
NUMB-220ENST00000556112 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
NUMB-220ENST00000556112 PCDHB8Q9UN66 801 aa8.9□□□□□ -0.98
NUMB-220ENST00000556112 ZNF467Q7Z7K2 595 aaPredicted RBP8.89□□□□□ -0.99
NUMB-220ENST00000556112 DCBLD2Q96PD2 775 aa8.89□□□□□ -0.99
NUMB-220ENST00000556112 ABCC9O60706 1549 aa8.89□□□□□ -0.99
NUMB-220ENST00000556112 TRPC6Q9Y210 931 aa8.87□□□□□ -0.99
NUMB-220ENST00000556112 RNF25Q96BH1 459 aaPredicted RBP8.84□□□□□ -0.99
NUMB-220ENST00000556112 RIOK3O14730 519 aaKnown RBP8.83□□□□□ -1
NUMB-220ENST00000556112 TIE1P35590 1138 aa8.83□□□□□ -1
NUMB-220ENST00000556112 POTEIP0CG38 1075 aa8.82□□□□□ -1
NUMB-220ENST00000556112 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
NUMB-220ENST00000556112 RGL2O15211 777 aa8.81□□□□□ -1
NUMB-220ENST00000556112 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
NUMB-220ENST00000556112 TTLL13PA6NNM8 815 aa8.8□□□□□ -1
NUMB-220ENST00000556112 ATMINO43313 823 aaPredicted RBP8.8□□□□□ -1
NUMB-220ENST00000556112 PSEN1P49768 467 aa8.8□□□□□ -1
NUMB-220ENST00000556112 PDAP1Q13442 181 aaKnown RBP8.8□□□□□ -1
NUMB-220ENST00000556112 ASTLQ6HA08 431 aaPredicted RBP8.8□□□□□ -1
NUMB-220ENST00000556112 ATN1P54259 1190 aaPredicted RBP8.78□□□□□ -1
NUMB-220ENST00000556112 VGFO15240 615 aaPredicted RBP8.77□□□□□ -1.01
NUMB-220ENST00000556112 TAOK2Q9UL54 1235 aa8.77□□□□□ -1.01
NUMB-220ENST00000556112 PELP1Q8IZL8 1130 aaKnown RBP8.76□□□□□ -1.01
NUMB-220ENST00000556112 TRIM35Q9UPQ4 493 aa8.75□□□□□ -1.01
NUMB-220ENST00000556112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.74□□□□□ -1.01
NUMB-220ENST00000556112 ZFP91Q96JP5 570 aaPredicted RBP8.74□□□□□ -1.01
NUMB-220ENST00000556112 DCAF8L2P0C7V8 631 aa8.73□□□□□ -1.01
NUMB-220ENST00000556112 GOLGA2Q08379 1002 aa8.72□□□□□ -1.01
NUMB-220ENST00000556112 STK25O00506 426 aa8.7□□□□□ -1.02
NUMB-220ENST00000556112 SLC39A7Q92504 469 aa8.7□□□□□ -1.02
NUMB-220ENST00000556112 CABP2Q9NPB3 220 aa8.7□□□□□ -1.02
NUMB-220ENST00000556112 C7P10643 843 aa8.69□□□□□ -1.02
NUMB-220ENST00000556112 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
NUMB-220ENST00000556112 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
NUMB-220ENST00000556112 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
NUMB-220ENST00000556112 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
NUMB-220ENST00000556112 CHGAP10645 457 aaKnown RBP8.66□□□□□ -1.02
NUMB-220ENST00000556112 IER5LQ5T953 404 aa8.66□□□□□ -1.02
NUMB-220ENST00000556112 SEC24BO95487 1268 aa8.65□□□□□ -1.02
NUMB-220ENST00000556112 EFCAB3Q8N7B9 438 aa8.64□□□□□ -1.03
NUMB-220ENST00000556112 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
NUMB-220ENST00000556112 COLQQ9Y215 455 aaPredicted RBP8.62□□□□□ -1.03
NUMB-220ENST00000556112 PLCG2P16885 1265 aa8.61□□□□□ -1.03
NUMB-220ENST00000556112 POTEFA5A3E0 1075 aa8.6□□□□□ -1.03
NUMB-220ENST00000556112 IRX5P78411 483 aaPredicted RBP8.6□□□□□ -1.03
NUMB-220ENST00000556112 OCEL1Q9H607 264 aa8.6□□□□□ -1.03
NUMB-220ENST00000556112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.6□□□□□ -1.031e-6■□□□□ 10.1
NUMB-220ENST00000556112 SOX12O15370 315 aa8.58□□□□□ -1.04
NUMB-220ENST00000556112 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
NUMB-220ENST00000556112 LHX8Q68G74 356 aa8.56□□□□□ -1.04
NUMB-220ENST00000556112 PDCD7Q8N8D1 485 aaKnown RBP8.55□□□□□ -1.04
NUMB-220ENST00000556112 PHF8Q9UPP1 1060 aa8.55□□□□□ -1.04
NUMB-220ENST00000556112 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
NUMB-220ENST00000556112 NLRP6P59044 892 aa8.53□□□□□ -1.04
NUMB-220ENST00000556112 MFRPQ9BY79 579 aa8.53□□□□□ -1.04
NUMB-220ENST00000556112 NACADO15069 1562 aa8.52□□□□□ -1.04
NUMB-220ENST00000556112 RB1CC1Q8TDY2 1594 aa8.52□□□□□ -1.04
NUMB-220ENST00000556112 DPY19L2Q6NUT2 758 aa8.52□□□□□ -1.05
NUMB-220ENST00000556112 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
NUMB-220ENST00000556112 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
NUMB-220ENST00000556112 NKX1-1Q15270 411 aaPredicted RBP8.5□□□□□ -1.05
NUMB-220ENST00000556112 FBXO22Q8NEZ5 403 aa8.5□□□□□ -1.05
NUMB-220ENST00000556112 MS4A4AQ96JQ5 239 aa8.5□□□□□ -1.05
NUMB-220ENST00000556112 L3MBTL3Q96JM7 780 aaPredicted RBP8.48□□□□□ -1.05
NUMB-220ENST00000556112 ZCCHC6Q5VYS8 1495 aaKnown RBP8.48□□□□□ -1.05
NUMB-220ENST00000556112 MYO15BQ96JP2 1530 aa8.48□□□□□ -1.05
NUMB-220ENST00000556112 G3V3G9 751 aa8.47□□□□□ -1.05
NUMB-220ENST00000556112 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
NUMB-220ENST00000556112 MAMSTRQ6ZN01 415 aa8.46□□□□□ -1.06
NUMB-220ENST00000556112 SCUBE2Q9NQ36 999 aa8.45□□□□□ -1.06
NUMB-220ENST00000556112 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
NUMB-220ENST00000556112 BOLA1Q9Y3E2 137 aa8.45□□□□□ -1.06
NUMB-220ENST00000556112 DCAF1Q9Y4B6 1507 aa8.44□□□□□ -1.06
NUMB-220ENST00000556112 OTUD5Q96G74 571 aa8.43□□□□□ -1.06
NUMB-220ENST00000556112 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
NUMB-220ENST00000556112 GTPBP6O43824 516 aaPredicted RBP8.42□□□□□ -1.06
NUMB-220ENST00000556112 C3orf67Q6ZVT6 689 aa8.42□□□□□ -1.06
NUMB-220ENST00000556112 PPP1R37O75864 691 aa8.41□□□□□ -1.06
NUMB-220ENST00000556112 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms