RNA–Protein interactions for RNA: ENST00000555161.1

RPS3AP4-201, Transcript of ribosomal protein S3A pseudogene 4, humanhuman

BASIC

Gene RPS3AP4, Length 764 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP4-201ENST00000555161 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
RPS3AP4-201ENST00000555161 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
RPS3AP4-201ENST00000555161 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
RPS3AP4-201ENST00000555161 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
RPS3AP4-201ENST00000555161 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
RPS3AP4-201ENST00000555161 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
RPS3AP4-201ENST00000555161 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
RPS3AP4-201ENST00000555161 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
RPS3AP4-201ENST00000555161 C7P10643 843 aa12.99□□□□□ -0.33
RPS3AP4-201ENST00000555161 MIER1Q8N108 512 aa12.96□□□□□ -0.33
RPS3AP4-201ENST00000555161 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
RPS3AP4-201ENST00000555161 MAP3K13O43283 966 aa12.94□□□□□ -0.34
RPS3AP4-201ENST00000555161 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
RPS3AP4-201ENST00000555161 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
RPS3AP4-201ENST00000555161 POTEMA6NI47 508 aa12.89□□□□□ -0.35
RPS3AP4-201ENST00000555161 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
RPS3AP4-201ENST00000555161 TIE1P35590 1138 aa12.87□□□□□ -0.35
RPS3AP4-201ENST00000555161 FKBP8Q14318 412 aa12.86□□□□□ -0.35
RPS3AP4-201ENST00000555161 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
RPS3AP4-201ENST00000555161 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
RPS3AP4-201ENST00000555161 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
RPS3AP4-201ENST00000555161 NUBP1P53384 320 aa12.83□□□□□ -0.36
RPS3AP4-201ENST00000555161 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
RPS3AP4-201ENST00000555161 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
RPS3AP4-201ENST00000555161 COLQQ9Y215 455 aaPredicted RBP12.79□□□□□ -0.36
RPS3AP4-201ENST00000555161 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
RPS3AP4-201ENST00000555161 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
RPS3AP4-201ENST00000555161 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
RPS3AP4-201ENST00000555161 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
RPS3AP4-201ENST00000555161 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
RPS3AP4-201ENST00000555161 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
RPS3AP4-201ENST00000555161 IER5LQ5T953 404 aa12.67□□□□□ -0.38
RPS3AP4-201ENST00000555161 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
RPS3AP4-201ENST00000555161 SEC24BO95487 1268 aa12.66□□□□□ -0.38
RPS3AP4-201ENST00000555161 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
RPS3AP4-201ENST00000555161 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
RPS3AP4-201ENST00000555161 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
RPS3AP4-201ENST00000555161 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
RPS3AP4-201ENST00000555161 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
RPS3AP4-201ENST00000555161 PYGBP11216 843 aa12.55□□□□□ -0.4
RPS3AP4-201ENST00000555161 PLCG2P16885 1265 aa12.5□□□□□ -0.41
RPS3AP4-201ENST00000555161 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
RPS3AP4-201ENST00000555161 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
RPS3AP4-201ENST00000555161 SLAIN1Q8ND83 568 aa12.48□□□□□ -0.41
RPS3AP4-201ENST00000555161 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
RPS3AP4-201ENST00000555161 ST18O60284 1047 aa12.43□□□□□ -0.42
RPS3AP4-201ENST00000555161 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
RPS3AP4-201ENST00000555161 CDAN1Q8IWY9 1227 aa12.39□□□□□ -0.43
RPS3AP4-201ENST00000555161 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
RPS3AP4-201ENST00000555161 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
RPS3AP4-201ENST00000555161 GSE1Q14687 1217 aa12.32□□□□□ -0.44
RPS3AP4-201ENST00000555161 ZNF467Q7Z7K2 595 aaPredicted RBP12.32□□□□□ -0.44
RPS3AP4-201ENST00000555161 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
RPS3AP4-201ENST00000555161 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
RPS3AP4-201ENST00000555161 TMEM121BQ9BXQ6 578 aaPredicted RBP12.25□□□□□ -0.45
RPS3AP4-201ENST00000555161 PSEN1P49768 467 aa12.24□□□□□ -0.45
RPS3AP4-201ENST00000555161 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
RPS3AP4-201ENST00000555161 MKRN3Q13064 507 aaKnown RBP12.22□□□□□ -0.45
RPS3AP4-201ENST00000555161 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
RPS3AP4-201ENST00000555161 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
RPS3AP4-201ENST00000555161 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
RPS3AP4-201ENST00000555161 SNPHO15079 494 aa12.19□□□□□ -0.46
RPS3AP4-201ENST00000555161 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
RPS3AP4-201ENST00000555161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
RPS3AP4-201ENST00000555161 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
RPS3AP4-201ENST00000555161 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
RPS3AP4-201ENST00000555161 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
RPS3AP4-201ENST00000555161 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
RPS3AP4-201ENST00000555161 SPNS2Q8IVW8 549 aa12.11□□□□□ -0.47
RPS3AP4-201ENST00000555161 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
RPS3AP4-201ENST00000555161 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
RPS3AP4-201ENST00000555161 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
RPS3AP4-201ENST00000555161 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
RPS3AP4-201ENST00000555161 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
RPS3AP4-201ENST00000555161 EMP3P54852 163 aa12.07□□□□□ -0.48
RPS3AP4-201ENST00000555161 KRTAP3-3Q9BYR6 98 aa12.03□□□□□ -0.48
RPS3AP4-201ENST00000555161 KRTAP3-2Q9BYR7 98 aa12.03□□□□□ -0.48
RPS3AP4-201ENST00000555161 BOLA1Q9Y3E2 137 aa12.03□□□□□ -0.48
RPS3AP4-201ENST00000555161 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.49
RPS3AP4-201ENST00000555161 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
RPS3AP4-201ENST00000555161 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
RPS3AP4-201ENST00000555161 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
RPS3AP4-201ENST00000555161 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
RPS3AP4-201ENST00000555161 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
RPS3AP4-201ENST00000555161 G3V3G9 751 aa11.91□□□□□ -0.5
RPS3AP4-201ENST00000555161 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
RPS3AP4-201ENST00000555161 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
RPS3AP4-201ENST00000555161 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
RPS3AP4-201ENST00000555161 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
RPS3AP4-201ENST00000555161 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
RPS3AP4-201ENST00000555161 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
RPS3AP4-201ENST00000555161 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
RPS3AP4-201ENST00000555161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
RPS3AP4-201ENST00000555161 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
RPS3AP4-201ENST00000555161 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
RPS3AP4-201ENST00000555161 ERBB3P21860 1342 aa11.77□□□□□ -0.53
RPS3AP4-201ENST00000555161 SOX12O15370 315 aa11.76□□□□□ -0.53
RPS3AP4-201ENST00000555161 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
RPS3AP4-201ENST00000555161 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
RPS3AP4-201ENST00000555161 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms