RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
SCFD1-214ENST00000554819 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
SCFD1-214ENST00000554819 TRIM41Q8WV44 630 aa11.23□□□□□ -0.61
SCFD1-214ENST00000554819 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
SCFD1-214ENST00000554819 PKD2Q13563 968 aa11.2□□□□□ -0.62
SCFD1-214ENST00000554819 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
SCFD1-214ENST00000554819 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
SCFD1-214ENST00000554819 CHRM1P11229 460 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-214ENST00000554819 PYGBP11216 843 aa11.12□□□□□ -0.63
SCFD1-214ENST00000554819 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
SCFD1-214ENST00000554819 CLCN6P51797 869 aa11.09□□□□□ -0.63
SCFD1-214ENST00000554819 EVX2Q03828 476 aa11.09□□□□□ -0.63
SCFD1-214ENST00000554819 PHF12Q96QT6 1004 aa11.07□□□□□ -0.64
SCFD1-214ENST00000554819 SGIP1Q9BQI5 828 aa11.07□□□□□ -0.64
SCFD1-214ENST00000554819 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
SCFD1-214ENST00000554819 MAP3K13O43283 966 aa11.03□□□□□ -0.64
SCFD1-214ENST00000554819 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
SCFD1-214ENST00000554819 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
SCFD1-214ENST00000554819 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
SCFD1-214ENST00000554819 RGL2O15211 777 aa11.01□□□□□ -0.65
SCFD1-214ENST00000554819 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
SCFD1-214ENST00000554819 DCAF8L2P0C7V8 631 aa10.97□□□□□ -0.65
SCFD1-214ENST00000554819 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-214ENST00000554819 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
SCFD1-214ENST00000554819 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-214ENST00000554819 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
SCFD1-214ENST00000554819 MS4A3Q96HJ5 214 aa10.94□□□□□ -0.66
SCFD1-214ENST00000554819 GABBR2O75899 941 aa10.93□□□□□ -0.66
SCFD1-214ENST00000554819 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-214ENST00000554819 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
SCFD1-214ENST00000554819 PSEN1P49768 467 aa10.88□□□□□ -0.67
SCFD1-214ENST00000554819 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-214ENST00000554819 TIE1P35590 1138 aa10.85□□□□□ -0.67
SCFD1-214ENST00000554819 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-214ENST00000554819 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
SCFD1-214ENST00000554819 STK25O00506 426 aa10.83□□□□□ -0.68
SCFD1-214ENST00000554819 DCBLD2Q96PD2 775 aa10.82□□□□□ -0.68
SCFD1-214ENST00000554819 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
SCFD1-214ENST00000554819 TRPC6Q9Y210 931 aa10.82□□□□□ -0.68
SCFD1-214ENST00000554819 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
SCFD1-214ENST00000554819 BCL11BQ9C0K0 894 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-214ENST00000554819 STK24Q9Y6E0 443 aa10.8□□□□□ -0.68
SCFD1-214ENST00000554819 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
SCFD1-214ENST00000554819 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-214ENST00000554819 GOLGA2Q08379 1002 aa10.77□□□□□ -0.69
SCFD1-214ENST00000554819 ASTLQ6HA08 431 aaPredicted RBP10.76□□□□□ -0.69
SCFD1-214ENST00000554819 ATMINO43313 823 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-214ENST00000554819 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
SCFD1-214ENST00000554819 BBXQ8WY36 941 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-214ENST00000554819 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
SCFD1-214ENST00000554819 ATN1P54259 1190 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-214ENST00000554819 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
SCFD1-214ENST00000554819 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
SCFD1-214ENST00000554819 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-214ENST00000554819 SOX12O15370 315 aa10.68□□□□□ -0.7
SCFD1-214ENST00000554819 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
SCFD1-214ENST00000554819 POTEIP0CG38 1075 aa10.66□□□□□ -0.7
SCFD1-214ENST00000554819 IER5LQ5T953 404 aa10.65□□□□□ -0.7
SCFD1-214ENST00000554819 RYDENQ9NUL5 291 aaKnown RBP10.65□□□□□ -0.7
SCFD1-214ENST00000554819 SLC39A7Q92504 469 aa10.64□□□□□ -0.71
SCFD1-214ENST00000554819 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
SCFD1-214ENST00000554819 C7P10643 843 aa10.61□□□□□ -0.71
SCFD1-214ENST00000554819 NLRP6P59044 892 aa10.61□□□□□ -0.71
SCFD1-214ENST00000554819 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-214ENST00000554819 SPRYD3Q8NCJ5 442 aa10.59□□□□□ -0.71
SCFD1-214ENST00000554819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.714e-11■■■□□ 14.6
SCFD1-214ENST00000554819 SEC24BO95487 1268 aa10.58□□□□□ -0.72
SCFD1-214ENST00000554819 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
SCFD1-214ENST00000554819 OCEL1Q9H607 264 aa10.57□□□□□ -0.72
SCFD1-214ENST00000554819 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
SCFD1-214ENST00000554819 PLCG2P16885 1265 aa10.56□□□□□ -0.72
SCFD1-214ENST00000554819 IRX5P78411 483 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-214ENST00000554819 PAXIP1Q6ZW49 1069 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-214ENST00000554819 METRNQ9UJH8 293 aa10.56□□□□□ -0.72
SCFD1-214ENST00000554819 LHX8Q68G74 356 aa10.55□□□□□ -0.72
SCFD1-214ENST00000554819 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-214ENST00000554819 CFAP44Q96MT7 982 aa10.55□□□□□ -0.72
SCFD1-214ENST00000554819 GTPBP6O43824 516 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-214ENST00000554819 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
SCFD1-214ENST00000554819 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
SCFD1-214ENST00000554819 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
SCFD1-214ENST00000554819 MS4A4AQ96JQ5 239 aa10.49□□□□□ -0.73
SCFD1-214ENST00000554819 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-214ENST00000554819 L3MBTL3Q96JM7 780 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-214ENST00000554819 POTEFA5A3E0 1075 aa10.46□□□□□ -0.73
SCFD1-214ENST00000554819 G3V3G9 751 aa10.45□□□□□ -0.74
SCFD1-214ENST00000554819 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
SCFD1-214ENST00000554819 PPP1R37O75864 691 aa10.42□□□□□ -0.74
SCFD1-214ENST00000554819 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
SCFD1-214ENST00000554819 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-214ENST00000554819 TMEM121BQ9BXQ6 578 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-214ENST00000554819 MICALL2Q8IY33 904 aa10.36□□□□□ -0.75
SCFD1-214ENST00000554819 MAMSTRQ6ZN01 415 aa10.33□□□□□ -0.76
SCFD1-214ENST00000554819 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
SCFD1-214ENST00000554819 C3orf67Q6ZVT6 689 aa10.32□□□□□ -0.76
SCFD1-214ENST00000554819 TSHZ2Q9NRE2 1034 aa10.31□□□□□ -0.76
SCFD1-214ENST00000554819 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
SCFD1-214ENST00000554819 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
SCFD1-214ENST00000554819 POTEJP0CG39 1038 aa10.27□□□□□ -0.77
SCFD1-214ENST00000554819 PDE4AP27815 886 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms