RNA–Protein interactions for RNA: ENST00000554186.1

LINC00520-201, long intergenic non-protein coding RNA 520, humanhuman

TSL 5 BASIC

Gene LINC00520, Length 831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-201ENST00000554186 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
LINC00520-201ENST00000554186 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
LINC00520-201ENST00000554186 LCE2DQ5TA82 110 aaPredicted RBP13.04□□□□□ -0.32
LINC00520-201ENST00000554186 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
LINC00520-201ENST00000554186 ATMINO43313 823 aaPredicted RBP12.98□□□□□ -0.33
LINC00520-201ENST00000554186 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
LINC00520-201ENST00000554186 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
LINC00520-201ENST00000554186 MIER1Q8N108 512 aa12.96□□□□□ -0.33
LINC00520-201ENST00000554186 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
LINC00520-201ENST00000554186 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
LINC00520-201ENST00000554186 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
LINC00520-201ENST00000554186 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
LINC00520-201ENST00000554186 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
LINC00520-201ENST00000554186 MAP3K13O43283 966 aa12.87□□□□□ -0.35
LINC00520-201ENST00000554186 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
LINC00520-201ENST00000554186 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
LINC00520-201ENST00000554186 C7P10643 843 aa12.84□□□□□ -0.35
LINC00520-201ENST00000554186 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
LINC00520-201ENST00000554186 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
LINC00520-201ENST00000554186 FKBP8Q14318 412 aa12.83□□□□□ -0.36
LINC00520-201ENST00000554186 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
LINC00520-201ENST00000554186 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
LINC00520-201ENST00000554186 NUBP1P53384 320 aa12.8□□□□□ -0.36
LINC00520-201ENST00000554186 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
LINC00520-201ENST00000554186 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
LINC00520-201ENST00000554186 TIE1P35590 1138 aa12.72□□□□□ -0.37
LINC00520-201ENST00000554186 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
LINC00520-201ENST00000554186 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
LINC00520-201ENST00000554186 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
LINC00520-201ENST00000554186 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
LINC00520-201ENST00000554186 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
LINC00520-201ENST00000554186 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
LINC00520-201ENST00000554186 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
LINC00520-201ENST00000554186 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
LINC00520-201ENST00000554186 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
LINC00520-201ENST00000554186 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
LINC00520-201ENST00000554186 SEC24BO95487 1268 aa12.56□□□□□ -0.4
LINC00520-201ENST00000554186 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
LINC00520-201ENST00000554186 PYGBP11216 843 aa12.54□□□□□ -0.4
LINC00520-201ENST00000554186 IER5LQ5T953 404 aa12.52□□□□□ -0.41
LINC00520-201ENST00000554186 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
LINC00520-201ENST00000554186 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
LINC00520-201ENST00000554186 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
LINC00520-201ENST00000554186 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
LINC00520-201ENST00000554186 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
LINC00520-201ENST00000554186 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
LINC00520-201ENST00000554186 PLCG2P16885 1265 aa12.4□□□□□ -0.42
LINC00520-201ENST00000554186 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
LINC00520-201ENST00000554186 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
LINC00520-201ENST00000554186 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
LINC00520-201ENST00000554186 ST18O60284 1047 aa12.29□□□□□ -0.44
LINC00520-201ENST00000554186 GSE1Q14687 1217 aa12.29□□□□□ -0.44
LINC00520-201ENST00000554186 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
LINC00520-201ENST00000554186 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
LINC00520-201ENST00000554186 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
LINC00520-201ENST00000554186 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
LINC00520-201ENST00000554186 PSEN1P49768 467 aa12.21□□□□□ -0.45
LINC00520-201ENST00000554186 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.18□□□□□ -0.46
LINC00520-201ENST00000554186 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
LINC00520-201ENST00000554186 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
LINC00520-201ENST00000554186 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
LINC00520-201ENST00000554186 GOLGA2Q08379 1002 aa12.14□□□□□ -0.47
LINC00520-201ENST00000554186 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC00520-201ENST00000554186 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
LINC00520-201ENST00000554186 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
LINC00520-201ENST00000554186 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
LINC00520-201ENST00000554186 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
LINC00520-201ENST00000554186 C3orf67Q6ZVT6 689 aa12.08□□□□□ -0.48
LINC00520-201ENST00000554186 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
LINC00520-201ENST00000554186 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
LINC00520-201ENST00000554186 SNPHO15079 494 aa12.04□□□□□ -0.48
LINC00520-201ENST00000554186 TMEM121BQ9BXQ6 578 aaPredicted RBP12.04□□□□□ -0.48
LINC00520-201ENST00000554186 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
LINC00520-201ENST00000554186 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
LINC00520-201ENST00000554186 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
LINC00520-201ENST00000554186 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
LINC00520-201ENST00000554186 EMP3P54852 163 aa11.94□□□□□ -0.5
LINC00520-201ENST00000554186 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
LINC00520-201ENST00000554186 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
LINC00520-201ENST00000554186 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
LINC00520-201ENST00000554186 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
LINC00520-201ENST00000554186 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
LINC00520-201ENST00000554186 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
LINC00520-201ENST00000554186 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
LINC00520-201ENST00000554186 G3V3G9 751 aa11.85□□□□□ -0.51
LINC00520-201ENST00000554186 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
LINC00520-201ENST00000554186 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
LINC00520-201ENST00000554186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.82□□□□□ -0.52
LINC00520-201ENST00000554186 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
LINC00520-201ENST00000554186 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
LINC00520-201ENST00000554186 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
LINC00520-201ENST00000554186 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
LINC00520-201ENST00000554186 HOXB1P14653 301 aaPredicted RBP11.76□□□□□ -0.53
LINC00520-201ENST00000554186 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
LINC00520-201ENST00000554186 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
LINC00520-201ENST00000554186 SOX12O15370 315 aa11.72□□□□□ -0.53
LINC00520-201ENST00000554186 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
LINC00520-201ENST00000554186 ERBB3P21860 1342 aa11.68□□□□□ -0.54
LINC00520-201ENST00000554186 VARS2Q5ST30 1063 aaKnown RBP11.66□□□□□ -0.54
LINC00520-201ENST00000554186 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms