RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RASEFQ8IZ41 740 aa8.87□□□□□ -0.99
SLIRP-202ENST00000553981 PELP1Q8IZL8 1130 aaKnown RBP8.86□□□□□ -0.99
SLIRP-202ENST00000553981 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
SLIRP-202ENST00000553981 KIF12Q96FN5 646 aa8.84□□□□□ -0.99
SLIRP-202ENST00000553981 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
SLIRP-202ENST00000553981 POTEB2H3BUK9 544 aa8.81□□□□□ -1
SLIRP-202ENST00000553981 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
SLIRP-202ENST00000553981 MAP3K13O43283 966 aa8.8□□□□□ -1
SLIRP-202ENST00000553981 NUBP1P53384 320 aa8.8□□□□□ -1
SLIRP-202ENST00000553981 TRPC6Q9Y210 931 aa8.78□□□□□ -1
SLIRP-202ENST00000553981 ATN1P54259 1190 aaPredicted RBP8.77□□□□□ -1.01
SLIRP-202ENST00000553981 METRNQ9UJH8 293 aa8.77□□□□□ -1.01
SLIRP-202ENST00000553981 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
SLIRP-202ENST00000553981 FBXO3Q9UK99 471 aa8.76□□□□□ -1.01
SLIRP-202ENST00000553981 OTUD5Q96G74 571 aa8.75□□□□□ -1.01
SLIRP-202ENST00000553981 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
SLIRP-202ENST00000553981 C7P10643 843 aa8.74□□□□□ -1.01
SLIRP-202ENST00000553981 TIE1P35590 1138 aa8.72□□□□□ -1.01
SLIRP-202ENST00000553981 FAM212AQ96EL1 285 aa8.72□□□□□ -1.01
SLIRP-202ENST00000553981 SGIP1Q9BQI5 828 aa8.71□□□□□ -1.02
SLIRP-202ENST00000553981 PCDHB13Q9Y5F0 798 aa8.7□□□□□ -1.02
SLIRP-202ENST00000553981 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
SLIRP-202ENST00000553981 POTEJP0CG39 1038 aa8.68□□□□□ -1.02
SLIRP-202ENST00000553981 VASPP50552 380 aaPredicted RBP8.67□□□□□ -1.02
SLIRP-202ENST00000553981 IFNL1Q8IU54 200 aa8.67□□□□□ -1.02
SLIRP-202ENST00000553981 POTEFA5A3E0 1075 aa8.66□□□□□ -1.02
SLIRP-202ENST00000553981 DCAF8Q5TAQ9 597 aa8.65□□□□□ -1.02
SLIRP-202ENST00000553981 PYGBP11216 843 aa8.62□□□□□ -1.03
SLIRP-202ENST00000553981 TRIM35Q9UPQ4 493 aa8.62□□□□□ -1.03
SLIRP-202ENST00000553981 KLHL34Q8N239 644 aa8.61□□□□□ -1.03
SLIRP-202ENST00000553981 MAMSTRQ6ZN01 415 aa8.6□□□□□ -1.03
SLIRP-202ENST00000553981 COLQQ9Y215 455 aaPredicted RBP8.6□□□□□ -1.03
SLIRP-202ENST00000553981 TMEM106CQ9BVX2 250 aa8.59□□□□□ -1.03
SLIRP-202ENST00000553981 SEC24BO95487 1268 aa8.58□□□□□ -1.04
SLIRP-202ENST00000553981 IER5LQ5T953 404 aa8.58□□□□□ -1.04
SLIRP-202ENST00000553981 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
SLIRP-202ENST00000553981 GSE1Q14687 1217 aa8.55□□□□□ -1.04
SLIRP-202ENST00000553981 PCDHB8Q9UN66 801 aa8.55□□□□□ -1.04
SLIRP-202ENST00000553981 IFNLR1Q8IU57 520 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-202ENST00000553981 POTEMA6NI47 508 aa8.5□□□□□ -1.05
SLIRP-202ENST00000553981 IRX5P78411 483 aaPredicted RBP8.5□□□□□ -1.05
SLIRP-202ENST00000553981 CHRM1P11229 460 aaPredicted RBP8.49□□□□□ -1.05
SLIRP-202ENST00000553981 PLCG2P16885 1265 aa8.48□□□□□ -1.05
SLIRP-202ENST00000553981 ZNF467Q7Z7K2 595 aaPredicted RBP8.48□□□□□ -1.05
SLIRP-202ENST00000553981 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
SLIRP-202ENST00000553981 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
SLIRP-202ENST00000553981 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-202ENST00000553981 FAM163AQ96GL9 167 aaPredicted RBP8.45□□□□□ -1.06
SLIRP-202ENST00000553981 OCEL1Q9H607 264 aa8.45□□□□□ -1.06
SLIRP-202ENST00000553981 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
SLIRP-202ENST00000553981 PSEN1P49768 467 aa8.41□□□□□ -1.06
SLIRP-202ENST00000553981 SLAIN1Q8ND83 568 aa8.41□□□□□ -1.06
SLIRP-202ENST00000553981 PLSCR2Q9NRY7 297 aa8.41□□□□□ -1.06
SLIRP-202ENST00000553981 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
SLIRP-202ENST00000553981 MKRN3Q13064 507 aaKnown RBP8.38□□□□□ -1.07
SLIRP-202ENST00000553981 PDCD7Q8N8D1 485 aaKnown RBP8.38□□□□□ -1.07
SLIRP-202ENST00000553981 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
SLIRP-202ENST00000553981 PCDH10Q9P2E7 1040 aa8.34□□□□□ -1.07
SLIRP-202ENST00000553981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.08
SLIRP-202ENST00000553981 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.33□□□□□ -1.08
SLIRP-202ENST00000553981 CABP2Q9NPB3 220 aa8.32□□□□□ -1.08
SLIRP-202ENST00000553981 ST18O60284 1047 aa8.31□□□□□ -1.08
SLIRP-202ENST00000553981 ILDR1Q86SU0 546 aaPredicted RBP8.31□□□□□ -1.08
SLIRP-202ENST00000553981 TRIM41Q8WV44 630 aa8.31□□□□□ -1.08
SLIRP-202ENST00000553981 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
SLIRP-202ENST00000553981 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
SLIRP-202ENST00000553981 DPY19L2Q6NUT2 758 aa8.27□□□□□ -1.09
SLIRP-202ENST00000553981 SNPHO15079 494 aa8.25□□□□□ -1.09
SLIRP-202ENST00000553981 CDAN1Q8IWY9 1227 aa8.23□□□□□ -1.09
SLIRP-202ENST00000553981 RNF25Q96BH1 459 aaPredicted RBP8.23□□□□□ -1.09
SLIRP-202ENST00000553981 EFCAB3Q8N7B9 438 aa8.22□□□□□ -1.09
SLIRP-202ENST00000553981 NISCHQ9Y2I1 1504 aa8.21□□□□□ -1.1
SLIRP-202ENST00000553981 RIOK3O14730 519 aaKnown RBP8.21□□□□□ -1.1
SLIRP-202ENST00000553981 TMEM121BQ9BXQ6 578 aaPredicted RBP8.21□□□□□ -1.1
SLIRP-202ENST00000553981 BOLA1Q9Y3E2 137 aa8.21□□□□□ -1.1
SLIRP-202ENST00000553981 G3V3G9 751 aa8.19□□□□□ -1.1
SLIRP-202ENST00000553981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.18□□□□□ -1.1
SLIRP-202ENST00000553981 ZFP91Q96JP5 570 aaPredicted RBP8.18□□□□□ -1.1
SLIRP-202ENST00000553981 VGFO15240 615 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-202ENST00000553981 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
SLIRP-202ENST00000553981 SOX12O15370 315 aa8.13□□□□□ -1.11
SLIRP-202ENST00000553981 MS4A4AQ96JQ5 239 aa8.12□□□□□ -1.11
SLIRP-202ENST00000553981 HOXB3P14651 431 aaPredicted RBP8.11□□□□□ -1.11
SLIRP-202ENST00000553981 PHF8Q9UPP1 1060 aa8.11□□□□□ -1.11
SLIRP-202ENST00000553981 EMP3P54852 163 aa8.1□□□□□ -1.11
SLIRP-202ENST00000553981 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
SLIRP-202ENST00000553981 BCL11BQ9C0K0 894 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-202ENST00000553981 ECM2O94769 699 aaPredicted RBP8.08□□□□□ -1.12
SLIRP-202ENST00000553981 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
SLIRP-202ENST00000553981 POTEB3A0JP26 581 aa8.07□□□□□ -1.12
SLIRP-202ENST00000553981 POTEBQ6S5H4 581 aa8.07□□□□□ -1.12
SLIRP-202ENST00000553981 TAOK2Q9UL54 1235 aa8.07□□□□□ -1.12
SLIRP-202ENST00000553981 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
SLIRP-202ENST00000553981 HS3ST6Q96QI5 342 aa8.06□□□□□ -1.12
SLIRP-202ENST00000553981 STK24Q9Y6E0 443 aa8.06□□□□□ -1.12
SLIRP-202ENST00000553981 PKD2Q13563 968 aa8.05□□□□□ -1.12
SLIRP-202ENST00000553981 NLRP6P59044 892 aa8.04□□□□□ -1.12
SLIRP-202ENST00000553981 DOK7Q18PE1 504 aa8.04□□□□□ -1.12
SLIRP-202ENST00000553981 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
SLIRP-202ENST00000553981 FBXO22Q8NEZ5 403 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms