RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
PRKCH-205ENST00000553726 NUBP1P53384 320 aa14.96□□□□□ -0.01
PRKCH-205ENST00000553726 CCDC61Q9Y6R9 512 aa14.96□□□□□ -0.01
PRKCH-205ENST00000553726 GALR2O43603 387 aaPredicted RBP14.94□□□□□ -0.02
PRKCH-205ENST00000553726 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
PRKCH-205ENST00000553726 DCBLD2Q96PD2 775 aa14.9□□□□□ -0.02
PRKCH-205ENST00000553726 KLHL34Q8N239 644 aa14.87□□□□□ -0.03
PRKCH-205ENST00000553726 FAM212AQ96EL1 285 aa14.85□□□□□ -0.03
PRKCH-205ENST00000553726 KIF12Q96FN5 646 aa14.85□□□□□ -0.03
PRKCH-205ENST00000553726 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
PRKCH-205ENST00000553726 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
PRKCH-205ENST00000553726 MAP3K13O43283 966 aa14.77□□□□□ -0.05
PRKCH-205ENST00000553726 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
PRKCH-205ENST00000553726 DCAF8Q5TAQ9 597 aa14.76□□□□□ -0.05
PRKCH-205ENST00000553726 NACADO15069 1562 aa14.74□□□□□ -0.05
PRKCH-205ENST00000553726 SGIP1Q9BQI5 828 aa14.7□□□□□ -0.06
PRKCH-205ENST00000553726 ASTLQ6HA08 431 aaPredicted RBP14.68□□□□□ -0.06
PRKCH-205ENST00000553726 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
PRKCH-205ENST00000553726 GSE1Q14687 1217 aa14.67□□□□□ -0.06
PRKCH-205ENST00000553726 PCDHB13Q9Y5F0 798 aa14.67□□□□□ -0.06
PRKCH-205ENST00000553726 ATMINO43313 823 aaPredicted RBP14.66□□□□□ -0.06
PRKCH-205ENST00000553726 LHX8Q68G74 356 aa14.64□□□□□ -0.07
PRKCH-205ENST00000553726 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
PRKCH-205ENST00000553726 PYGBP11216 843 aa14.63□□□□□ -0.07
PRKCH-205ENST00000553726 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
PRKCH-205ENST00000553726 TRPC6Q9Y210 931 aa14.63□□□□□ -0.07
PRKCH-205ENST00000553726 TIE1P35590 1138 aa14.6□□□□□ -0.07
PRKCH-205ENST00000553726 IFNL1Q8IU54 200 aa14.6□□□□□ -0.07
PRKCH-205ENST00000553726 BMP2KQ9NSY1 1161 aaPredicted RBP14.59□□□□□ -0.07
PRKCH-205ENST00000553726 ATN1P54259 1190 aaPredicted RBP14.57□□□□□ -0.08
PRKCH-205ENST00000553726 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
PRKCH-205ENST00000553726 SLC39A7Q92504 469 aa14.54□□□□□ -0.08
PRKCH-205ENST00000553726 CHRM1P11229 460 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-205ENST00000553726 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-205ENST00000553726 TTLL13PA6NNM8 815 aa14.52□□□□□ -0.09
PRKCH-205ENST00000553726 C7P10643 843 aa14.52□□□□□ -0.09
PRKCH-205ENST00000553726 METRNQ9UJH8 293 aa14.5□□□□□ -0.09
PRKCH-205ENST00000553726 PCDHB8Q9UN66 801 aa14.48□□□□□ -0.09
PRKCH-205ENST00000553726 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.09
PRKCH-205ENST00000553726 ZNF467Q7Z7K2 595 aaPredicted RBP14.45□□□□□ -0.1
PRKCH-205ENST00000553726 TMEM106CQ9BVX2 250 aa14.45□□□□□ -0.1
PRKCH-205ENST00000553726 TRIM35Q9UPQ4 493 aa14.43□□□□□ -0.1
PRKCH-205ENST00000553726 POTEB2H3BUK9 544 aa14.42□□□□□ -0.1
PRKCH-205ENST00000553726 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
PRKCH-205ENST00000553726 IER5LQ5T953 404 aa14.37□□□□□ -0.11
PRKCH-205ENST00000553726 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
PRKCH-205ENST00000553726 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
PRKCH-205ENST00000553726 ZCCHC6Q5VYS8 1495 aaKnown RBP14.33□□□□□ -0.12
PRKCH-205ENST00000553726 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
PRKCH-205ENST00000553726 SEC24BO95487 1268 aa14.31□□□□□ -0.12
PRKCH-205ENST00000553726 PSEN1P49768 467 aa14.3□□□□□ -0.12
PRKCH-205ENST00000553726 COLQQ9Y215 455 aaPredicted RBP14.3□□□□□ -0.12
PRKCH-205ENST00000553726 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
PRKCH-205ENST00000553726 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
PRKCH-205ENST00000553726 POTEJP0CG39 1038 aa14.27□□□□□ -0.13
PRKCH-205ENST00000553726 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
PRKCH-205ENST00000553726 MAMSTRQ6ZN01 415 aa14.23□□□□□ -0.13
PRKCH-205ENST00000553726 IRX5P78411 483 aaPredicted RBP14.22□□□□□ -0.13
PRKCH-205ENST00000553726 PLCG2P16885 1265 aa14.2□□□□□ -0.14
PRKCH-205ENST00000553726 GOLGA2Q08379 1002 aa14.2□□□□□ -0.14
PRKCH-205ENST00000553726 OCEL1Q9H607 264 aa14.18□□□□□ -0.14
PRKCH-205ENST00000553726 MKRN3Q13064 507 aaKnown RBP14.17□□□□□ -0.14
PRKCH-205ENST00000553726 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
PRKCH-205ENST00000553726 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
PRKCH-205ENST00000553726 RNF25Q96BH1 459 aaPredicted RBP14.15□□□□□ -0.14
PRKCH-205ENST00000553726 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
PRKCH-205ENST00000553726 CABP2Q9NPB3 220 aa14.11□□□□□ -0.15
PRKCH-205ENST00000553726 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
PRKCH-205ENST00000553726 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
PRKCH-205ENST00000553726 PKD2Q13563 968 aa14.08□□□□□ -0.16
PRKCH-205ENST00000553726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.08□□□□□ -0.16
PRKCH-205ENST00000553726 PDCD7Q8N8D1 485 aaKnown RBP14.06□□□□□ -0.16
PRKCH-205ENST00000553726 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
PRKCH-205ENST00000553726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.04□□□□□ -0.16
PRKCH-205ENST00000553726 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
PRKCH-205ENST00000553726 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
PRKCH-205ENST00000553726 TAOK2Q9UL54 1235 aa14.03□□□□□ -0.16
PRKCH-205ENST00000553726 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.16
PRKCH-205ENST00000553726 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
PRKCH-205ENST00000553726 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
PRKCH-205ENST00000553726 L3MBTL3Q96JM7 780 aaPredicted RBP13.97□□□□□ -0.17
PRKCH-205ENST00000553726 RGL2O15211 777 aa13.96□□□□□ -0.17
PRKCH-205ENST00000553726 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
PRKCH-205ENST00000553726 DPY19L2Q6NUT2 758 aa13.93□□□□□ -0.18
PRKCH-205ENST00000553726 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.92□□□□□ -0.18
PRKCH-205ENST00000553726 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
PRKCH-205ENST00000553726 SOX12O15370 315 aa13.9□□□□□ -0.18
PRKCH-205ENST00000553726 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
PRKCH-205ENST00000553726 STK25O00506 426 aa13.87□□□□□ -0.19
PRKCH-205ENST00000553726 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
PRKCH-205ENST00000553726 BOLA1Q9Y3E2 137 aa13.85□□□□□ -0.19
PRKCH-205ENST00000553726 G3V3G9 751 aa13.84□□□□□ -0.19
PRKCH-205ENST00000553726 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
PRKCH-205ENST00000553726 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
PRKCH-205ENST00000553726 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
PRKCH-205ENST00000553726 NLRP6P59044 892 aa13.78□□□□□ -0.2
PRKCH-205ENST00000553726 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-205ENST00000553726 TMEM121BQ9BXQ6 578 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-205ENST00000553726 POTEMA6NI47 508 aa13.74□□□□□ -0.21
PRKCH-205ENST00000553726 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms