RNA–Protein interactions for RNA: ENST00000553624.5

KTN1-210, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-210ENST00000553624 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
KTN1-210ENST00000553624 CIZ1Q9ULV3 898 aaPredicted RBP11.68□□□□□ -0.54
KTN1-210ENST00000553624 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
KTN1-210ENST00000553624 GSE1Q14687 1217 aa11.65□□□□□ -0.54
KTN1-210ENST00000553624 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
KTN1-210ENST00000553624 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
KTN1-210ENST00000553624 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
KTN1-210ENST00000553624 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
KTN1-210ENST00000553624 LHX8Q68G74 356 aa11.59□□□□□ -0.55
KTN1-210ENST00000553624 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
KTN1-210ENST00000553624 PKD2Q13563 968 aa11.58□□□□□ -0.56
KTN1-210ENST00000553624 ECM2O94769 699 aaPredicted RBP11.56□□□□□ -0.56
KTN1-210ENST00000553624 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
KTN1-210ENST00000553624 PHF12Q96QT6 1004 aa11.56□□□□□ -0.56
KTN1-210ENST00000553624 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
KTN1-210ENST00000553624 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
KTN1-210ENST00000553624 PYGBP11216 843 aa11.49□□□□□ -0.57
KTN1-210ENST00000553624 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
KTN1-210ENST00000553624 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
KTN1-210ENST00000553624 RGL2O15211 777 aa11.41□□□□□ -0.58
KTN1-210ENST00000553624 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
KTN1-210ENST00000553624 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
KTN1-210ENST00000553624 PCDHB13Q9Y5F0 798 aa11.37□□□□□ -0.59
KTN1-210ENST00000553624 RIOK3O14730 519 aaKnown RBP11.36□□□□□ -0.59
KTN1-210ENST00000553624 MAP3K13O43283 966 aa11.36□□□□□ -0.59
KTN1-210ENST00000553624 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
KTN1-210ENST00000553624 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
KTN1-210ENST00000553624 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
KTN1-210ENST00000553624 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
KTN1-210ENST00000553624 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
KTN1-210ENST00000553624 PCDHB8Q9UN66 801 aa11.31□□□□□ -0.6
KTN1-210ENST00000553624 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
KTN1-210ENST00000553624 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
KTN1-210ENST00000553624 VGFO15240 615 aaPredicted RBP11.29□□□□□ -0.6
KTN1-210ENST00000553624 ATMINO43313 823 aaPredicted RBP11.28□□□□□ -0.6
KTN1-210ENST00000553624 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
KTN1-210ENST00000553624 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
KTN1-210ENST00000553624 SLC39A7Q92504 469 aa11.23□□□□□ -0.61
KTN1-210ENST00000553624 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
KTN1-210ENST00000553624 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
KTN1-210ENST00000553624 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
KTN1-210ENST00000553624 PSEN1P49768 467 aa11.22□□□□□ -0.61
KTN1-210ENST00000553624 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
KTN1-210ENST00000553624 STK25O00506 426 aa11.21□□□□□ -0.61
KTN1-210ENST00000553624 C7P10643 843 aa11.2□□□□□ -0.62
KTN1-210ENST00000553624 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
KTN1-210ENST00000553624 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
KTN1-210ENST00000553624 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
KTN1-210ENST00000553624 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
KTN1-210ENST00000553624 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
KTN1-210ENST00000553624 BMP2KQ9NSY1 1161 aaPredicted RBP11.18□□□□□ -0.62
KTN1-210ENST00000553624 STK24Q9Y6E0 443 aa11.17□□□□□ -0.62
KTN1-210ENST00000553624 TIE1P35590 1138 aa11.16□□□□□ -0.62
KTN1-210ENST00000553624 TMEM106CQ9BVX2 250 aa11.15□□□□□ -0.62
KTN1-210ENST00000553624 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
KTN1-210ENST00000553624 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
KTN1-210ENST00000553624 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
KTN1-210ENST00000553624 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
KTN1-210ENST00000553624 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
KTN1-210ENST00000553624 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.07□□□□□ -0.64
KTN1-210ENST00000553624 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
KTN1-210ENST00000553624 MAMSTRQ6ZN01 415 aa11.06□□□□□ -0.64
KTN1-210ENST00000553624 TRIM35Q9UPQ4 493 aa11.04□□□□□ -0.64
KTN1-210ENST00000553624 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
KTN1-210ENST00000553624 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
KTN1-210ENST00000553624 SEC24BO95487 1268 aa11.01□□□□□ -0.65
KTN1-210ENST00000553624 EFCAB3Q8N7B9 438 aa11.01□□□□□ -0.65
KTN1-210ENST00000553624 SCUBE2Q9NQ36 999 aa11.01□□□□□ -0.65
KTN1-210ENST00000553624 NKX1-1Q15270 411 aaPredicted RBP10.99□□□□□ -0.65
KTN1-210ENST00000553624 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
KTN1-210ENST00000553624 IER5LQ5T953 404 aa10.98□□□□□ -0.65
KTN1-210ENST00000553624 SOX12O15370 315 aa10.96□□□□□ -0.65
KTN1-210ENST00000553624 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
KTN1-210ENST00000553624 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
KTN1-210ENST00000553624 RYDENQ9NUL5 291 aaKnown RBP10.95□□□□□ -0.66
KTN1-210ENST00000553624 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
KTN1-210ENST00000553624 NLRP6P59044 892 aa10.93□□□□□ -0.66
KTN1-210ENST00000553624 PLCB2Q00722 1185 aa10.93□□□□□ -0.66
KTN1-210ENST00000553624 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
KTN1-210ENST00000553624 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
KTN1-210ENST00000553624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.662e-10■■■■□ 24.8
KTN1-210ENST00000553624 POTEMA6NI47 508 aa10.91□□□□□ -0.66
KTN1-210ENST00000553624 GTPBP6O43824 516 aaPredicted RBP10.89□□□□□ -0.67
KTN1-210ENST00000553624 PLCG2P16885 1265 aa10.89□□□□□ -0.67
KTN1-210ENST00000553624 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
KTN1-210ENST00000553624 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
KTN1-210ENST00000553624 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
KTN1-210ENST00000553624 FAM163AQ96GL9 167 aaPredicted RBP10.85□□□□□ -0.67
KTN1-210ENST00000553624 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
KTN1-210ENST00000553624 PLSCR2Q9NRY7 297 aa10.85□□□□□ -0.67
KTN1-210ENST00000553624 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
KTN1-210ENST00000553624 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
KTN1-210ENST00000553624 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
KTN1-210ENST00000553624 PDCD7Q8N8D1 485 aaKnown RBP10.82□□□□□ -0.68
KTN1-210ENST00000553624 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
KTN1-210ENST00000553624 SLC24A1O60721 1099 aa10.79□□□□□ -0.68
KTN1-210ENST00000553624 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
KTN1-210ENST00000553624 G3V3G9 751 aa10.77□□□□□ -0.69
KTN1-210ENST00000553624 PPP1R37O75864 691 aa10.77□□□□□ -0.69
KTN1-210ENST00000553624 DPY19L2Q6NUT2 758 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms