RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 GSE1Q14687 1217 aa19.24■□□□□ 0.67
PCNX1-205ENST00000553508 PHF12Q96QT6 1004 aa19.23■□□□□ 0.67
PCNX1-205ENST00000553508 CCDC61Q9Y6R9 512 aa19.23■□□□□ 0.67
PCNX1-205ENST00000553508 ZNF579Q8NAF0 562 aaKnown RBP19.19■□□□□ 0.66
PCNX1-205ENST00000553508 SP7Q8TDD2 431 aaPredicted RBP19.16■□□□□ 0.66
PCNX1-205ENST00000553508 PYGBP11216 843 aa19.14■□□□□ 0.65
PCNX1-205ENST00000553508 GABBR2O75899 941 aa19.06■□□□□ 0.64
PCNX1-205ENST00000553508 KIF12Q96FN5 646 aa19.06■□□□□ 0.64
PCNX1-205ENST00000553508 MAP3K13O43283 966 aa19.04■□□□□ 0.64
PCNX1-205ENST00000553508 PKD2Q13563 968 aa19.01■□□□□ 0.63
PCNX1-205ENST00000553508 GALR2O43603 387 aaPredicted RBP18.98■□□□□ 0.63
PCNX1-205ENST00000553508 MS4A3Q96HJ5 214 aa18.98■□□□□ 0.63
PCNX1-205ENST00000553508 PCDHB13Q9Y5F0 798 aa18.98■□□□□ 0.63
PCNX1-205ENST00000553508 ECM2O94769 699 aaPredicted RBP18.96■□□□□ 0.63
PCNX1-205ENST00000553508 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
PCNX1-205ENST00000553508 CHRM1P11229 460 aaPredicted RBP18.93■□□□□ 0.62
PCNX1-205ENST00000553508 CLCN6P51797 869 aa18.93■□□□□ 0.62
PCNX1-205ENST00000553508 IFNL1Q8IU54 200 aa18.89■□□□□ 0.61
PCNX1-205ENST00000553508 PCDHB8Q9UN66 801 aa18.89■□□□□ 0.61
PCNX1-205ENST00000553508 RTN4Q9NQC3 1192 aaKnown RBP18.87■□□□□ 0.61
PCNX1-205ENST00000553508 AMER1Q5JTC6 1135 aaPredicted RBP18.86■□□□□ 0.61
PCNX1-205ENST00000553508 SGIP1Q9BQI5 828 aa18.86■□□□□ 0.61
PCNX1-205ENST00000553508 TRPC6Q9Y210 931 aa18.82■□□□□ 0.6
PCNX1-205ENST00000553508 ZNF467Q7Z7K2 595 aaPredicted RBP18.8■□□□□ 0.6
PCNX1-205ENST00000553508 RNF25Q96BH1 459 aaPredicted RBP18.78■□□□□ 0.6
PCNX1-205ENST00000553508 RGL2O15211 777 aa18.77■□□□□ 0.6
PCNX1-205ENST00000553508 DCBLD2Q96PD2 775 aa18.76■□□□□ 0.59
PCNX1-205ENST00000553508 RIOK3O14730 519 aaKnown RBP18.72■□□□□ 0.59
PCNX1-205ENST00000553508 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
PCNX1-205ENST00000553508 PSEN1P49768 467 aa18.65■□□□□ 0.58
PCNX1-205ENST00000553508 TMEM106CQ9BVX2 250 aa18.65■□□□□ 0.58
PCNX1-205ENST00000553508 BMP2KQ9NSY1 1161 aaPredicted RBP18.65■□□□□ 0.58
PCNX1-205ENST00000553508 TIE1P35590 1138 aa18.64■□□□□ 0.57
PCNX1-205ENST00000553508 PDAP1Q13442 181 aaKnown RBP18.63■□□□□ 0.57
PCNX1-205ENST00000553508 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
PCNX1-205ENST00000553508 TTLL13PA6NNM8 815 aa18.6■□□□□ 0.57
PCNX1-205ENST00000553508 VGFO15240 615 aaPredicted RBP18.6■□□□□ 0.57
PCNX1-205ENST00000553508 ATMINO43313 823 aaPredicted RBP18.59■□□□□ 0.57
PCNX1-205ENST00000553508 ATN1P54259 1190 aaPredicted RBP18.59■□□□□ 0.57
PCNX1-205ENST00000553508 ASTLQ6HA08 431 aaPredicted RBP18.57■□□□□ 0.56
PCNX1-205ENST00000553508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
PCNX1-205ENST00000553508 ZFP91Q96JP5 570 aaPredicted RBP18.56■□□□□ 0.56
PCNX1-205ENST00000553508 TAOK2Q9UL54 1235 aa18.54■□□□□ 0.56
PCNX1-205ENST00000553508 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
PCNX1-205ENST00000553508 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
PCNX1-205ENST00000553508 STK25O00506 426 aa18.46■□□□□ 0.55
PCNX1-205ENST00000553508 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
PCNX1-205ENST00000553508 STK24Q9Y6E0 443 aa18.45■□□□□ 0.54
PCNX1-205ENST00000553508 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
PCNX1-205ENST00000553508 BCL11BQ9C0K0 894 aaPredicted RBP18.44■□□□□ 0.54
PCNX1-205ENST00000553508 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
PCNX1-205ENST00000553508 SLC39A7Q92504 469 aa18.36■□□□□ 0.53
PCNX1-205ENST00000553508 MKRN3Q13064 507 aaKnown RBP18.35■□□□□ 0.53
PCNX1-205ENST00000553508 EFCAB3Q8N7B9 438 aa18.33■□□□□ 0.52
PCNX1-205ENST00000553508 METRNQ9UJH8 293 aa18.33■□□□□ 0.52
PCNX1-205ENST00000553508 C7P10643 843 aa18.3■□□□□ 0.52
PCNX1-205ENST00000553508 HS6ST3Q8IZP7 471 aa18.3■□□□□ 0.52
PCNX1-205ENST00000553508 SEC24BO95487 1268 aa18.27■□□□□ 0.52
PCNX1-205ENST00000553508 IER5LQ5T953 404 aa18.26■□□□□ 0.51
PCNX1-205ENST00000553508 COLQQ9Y215 455 aaPredicted RBP18.23■□□□□ 0.51
PCNX1-205ENST00000553508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■□□□□ 10.3
PCNX1-205ENST00000553508 POTEFA5A3E0 1075 aa18.2■□□□□ 0.5
PCNX1-205ENST00000553508 PLCG2P16885 1265 aa18.19■□□□□ 0.5
PCNX1-205ENST00000553508 IRX5P78411 483 aaPredicted RBP18.19■□□□□ 0.5
PCNX1-205ENST00000553508 SOX12O15370 315 aa18.16■□□□□ 0.5
PCNX1-205ENST00000553508 OCEL1Q9H607 264 aa18.16■□□□□ 0.5
PCNX1-205ENST00000553508 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
PCNX1-205ENST00000553508 MFRPQ9BY79 579 aa18.1■□□□□ 0.49
PCNX1-205ENST00000553508 PDCD7Q8N8D1 485 aaKnown RBP18.09■□□□□ 0.49
PCNX1-205ENST00000553508 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.48
PCNX1-205ENST00000553508 DPY19L2Q6NUT2 758 aa18.08■□□□□ 0.48
PCNX1-205ENST00000553508 POTEB2H3BUK9 544 aa18.07■□□□□ 0.48
PCNX1-205ENST00000553508 NLRP6P59044 892 aa18.07■□□□□ 0.48
PCNX1-205ENST00000553508 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
PCNX1-205ENST00000553508 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
PCNX1-205ENST00000553508 MS4A4AQ96JQ5 239 aa18.03■□□□□ 0.48
PCNX1-205ENST00000553508 LHX8Q68G74 356 aa18.02■□□□□ 0.48
PCNX1-205ENST00000553508 FBXO22Q8NEZ5 403 aa18.02■□□□□ 0.48
PCNX1-205ENST00000553508 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
PCNX1-205ENST00000553508 POTEJP0CG39 1038 aa17.96■□□□□ 0.47
PCNX1-205ENST00000553508 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
PCNX1-205ENST00000553508 L3MBTL3Q96JM7 780 aaPredicted RBP17.92■□□□□ 0.46
PCNX1-205ENST00000553508 G3V3G9 751 aa17.91■□□□□ 0.46
PCNX1-205ENST00000553508 GTPBP6O43824 516 aaPredicted RBP17.89■□□□□ 0.45
PCNX1-205ENST00000553508 PPP1R37O75864 691 aa17.89■□□□□ 0.45
PCNX1-205ENST00000553508 BOLA1Q9Y3E2 137 aa17.88■□□□□ 0.45
PCNX1-205ENST00000553508 RYDENQ9NUL5 291 aaKnown RBP17.86■□□□□ 0.45
PCNX1-205ENST00000553508 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
PCNX1-205ENST00000553508 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
PCNX1-205ENST00000553508 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
PCNX1-205ENST00000553508 SCUBE2Q9NQ36 999 aa17.81■□□□□ 0.44
PCNX1-205ENST00000553508 MAMSTRQ6ZN01 415 aa17.8■□□□□ 0.44
PCNX1-205ENST00000553508 MICALL2Q8IY33 904 aa17.8■□□□□ 0.44
PCNX1-205ENST00000553508 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
PCNX1-205ENST00000553508 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
PCNX1-205ENST00000553508 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.75■□□□□ 0.43
PCNX1-205ENST00000553508 TMEM121BQ9BXQ6 578 aaPredicted RBP17.73■□□□□ 0.43
PCNX1-205ENST00000553508 SLAIN1Q8ND83 568 aa17.68■□□□□ 0.42
PCNX1-205ENST00000553508 TMEM92Q6UXU6 159 aa17.59■□□□□ 0.41
PCNX1-205ENST00000553508 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms