RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 RASEFQ8IZ41 740 aa15.04■□□□□ -0
DEPDC4-210ENST00000551642 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
DEPDC4-210ENST00000551642 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
DEPDC4-210ENST00000551642 PHF12Q96QT6 1004 aa14.99□□□□□ -0.01
DEPDC4-210ENST00000551642 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
DEPDC4-210ENST00000551642 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
DEPDC4-210ENST00000551642 FAM212AQ96EL1 285 aa14.93□□□□□ -0.02
DEPDC4-210ENST00000551642 GALR2O43603 387 aaPredicted RBP14.91□□□□□ -0.02
DEPDC4-210ENST00000551642 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
DEPDC4-210ENST00000551642 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
DEPDC4-210ENST00000551642 SPOCK2Q92563 424 aa14.84□□□□□ -0.03
DEPDC4-210ENST00000551642 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
DEPDC4-210ENST00000551642 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
DEPDC4-210ENST00000551642 DCBLD2Q96PD2 775 aa14.83□□□□□ -0.04
DEPDC4-210ENST00000551642 DCAF8Q5TAQ9 597 aa14.82□□□□□ -0.04
DEPDC4-210ENST00000551642 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
DEPDC4-210ENST00000551642 GSE1Q14687 1217 aa14.81□□□□□ -0.04
DEPDC4-210ENST00000551642 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
DEPDC4-210ENST00000551642 MAP3K13O43283 966 aa14.79□□□□□ -0.04
DEPDC4-210ENST00000551642 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
DEPDC4-210ENST00000551642 PCDHB13Q9Y5F0 798 aa14.7□□□□□ -0.06
DEPDC4-210ENST00000551642 CHRM1P11229 460 aaPredicted RBP14.68□□□□□ -0.06
DEPDC4-210ENST00000551642 PYGBP11216 843 aa14.67□□□□□ -0.06
DEPDC4-210ENST00000551642 TIE1P35590 1138 aa14.66□□□□□ -0.06
DEPDC4-210ENST00000551642 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
DEPDC4-210ENST00000551642 IFNL1Q8IU54 200 aa14.64□□□□□ -0.07
DEPDC4-210ENST00000551642 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
DEPDC4-210ENST00000551642 TRPC6Q9Y210 931 aa14.62□□□□□ -0.07
DEPDC4-210ENST00000551642 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
DEPDC4-210ENST00000551642 BMP2KQ9NSY1 1161 aaPredicted RBP14.6□□□□□ -0.07
DEPDC4-210ENST00000551642 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
DEPDC4-210ENST00000551642 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
DEPDC4-210ENST00000551642 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
DEPDC4-210ENST00000551642 NACADO15069 1562 aa14.57□□□□□ -0.08
DEPDC4-210ENST00000551642 ATN1P54259 1190 aaPredicted RBP14.56□□□□□ -0.08
DEPDC4-210ENST00000551642 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
DEPDC4-210ENST00000551642 ZNF467Q7Z7K2 595 aaPredicted RBP14.55□□□□□ -0.08
DEPDC4-210ENST00000551642 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
DEPDC4-210ENST00000551642 SLC39A7Q92504 469 aa14.53□□□□□ -0.08
DEPDC4-210ENST00000551642 C7P10643 843 aa14.51□□□□□ -0.09
DEPDC4-210ENST00000551642 LHX8Q68G74 356 aa14.51□□□□□ -0.09
DEPDC4-210ENST00000551642 PCDHB8Q9UN66 801 aa14.51□□□□□ -0.09
DEPDC4-210ENST00000551642 TMEM106CQ9BVX2 250 aa14.46□□□□□ -0.09
DEPDC4-210ENST00000551642 METRNQ9UJH8 293 aa14.46□□□□□ -0.09
DEPDC4-210ENST00000551642 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
DEPDC4-210ENST00000551642 IER5LQ5T953 404 aa14.43□□□□□ -0.1
DEPDC4-210ENST00000551642 PDAP1Q13442 181 aaKnown RBP14.38□□□□□ -0.11
DEPDC4-210ENST00000551642 PSEN1P49768 467 aa14.37□□□□□ -0.11
DEPDC4-210ENST00000551642 POTEB2H3BUK9 544 aa14.34□□□□□ -0.11
DEPDC4-210ENST00000551642 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
DEPDC4-210ENST00000551642 RNF25Q96BH1 459 aaPredicted RBP14.29□□□□□ -0.12
DEPDC4-210ENST00000551642 RIOK3O14730 519 aaKnown RBP14.28□□□□□ -0.12
DEPDC4-210ENST00000551642 SEC24BO95487 1268 aa14.28□□□□□ -0.12
DEPDC4-210ENST00000551642 PKD2Q13563 968 aa14.28□□□□□ -0.12
DEPDC4-210ENST00000551642 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
DEPDC4-210ENST00000551642 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
DEPDC4-210ENST00000551642 IRX5P78411 483 aaPredicted RBP14.26□□□□□ -0.13
DEPDC4-210ENST00000551642 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
DEPDC4-210ENST00000551642 VGFO15240 615 aaPredicted RBP14.23□□□□□ -0.13
DEPDC4-210ENST00000551642 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
DEPDC4-210ENST00000551642 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
DEPDC4-210ENST00000551642 MAMSTRQ6ZN01 415 aa14.21□□□□□ -0.13
DEPDC4-210ENST00000551642 OTUD5Q96G74 571 aa14.21□□□□□ -0.13
DEPDC4-210ENST00000551642 OCEL1Q9H607 264 aa14.21□□□□□ -0.13
DEPDC4-210ENST00000551642 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
DEPDC4-210ENST00000551642 CUX2O14529 1486 aa14.2□□□□□ -0.14
DEPDC4-210ENST00000551642 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
DEPDC4-210ENST00000551642 PLCG2P16885 1265 aa14.2□□□□□ -0.14
DEPDC4-210ENST00000551642 MKRN3Q13064 507 aaKnown RBP14.2□□□□□ -0.14
DEPDC4-210ENST00000551642 ILDR1Q86SU0 546 aaPredicted RBP14.16□□□□□ -0.14
DEPDC4-210ENST00000551642 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
DEPDC4-210ENST00000551642 SHROOM4Q9ULL8 1493 aa14.15□□□□□ -0.14
DEPDC4-210ENST00000551642 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.15□□□□□ -0.14
DEPDC4-210ENST00000551642 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
DEPDC4-210ENST00000551642 SCUBE2Q9NQ36 999 aa14.12□□□□□ -0.15
DEPDC4-210ENST00000551642 PDCD7Q8N8D1 485 aaKnown RBP14.11□□□□□ -0.15
DEPDC4-210ENST00000551642 RGL2O15211 777 aa14.1□□□□□ -0.15
DEPDC4-210ENST00000551642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.1□□□□□ -0.15
DEPDC4-210ENST00000551642 EFCAB3Q8N7B9 438 aa14.06□□□□□ -0.16
DEPDC4-210ENST00000551642 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
DEPDC4-210ENST00000551642 SOX12O15370 315 aa14.03□□□□□ -0.16
DEPDC4-210ENST00000551642 L3MBTL3Q96JM7 780 aaPredicted RBP14.02□□□□□ -0.17
DEPDC4-210ENST00000551642 BCL11BQ9C0K0 894 aaPredicted RBP14.02□□□□□ -0.17
DEPDC4-210ENST00000551642 STK25O00506 426 aa13.98□□□□□ -0.17
DEPDC4-210ENST00000551642 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
DEPDC4-210ENST00000551642 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
DEPDC4-210ENST00000551642 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.91□□□□□ -0.18
DEPDC4-210ENST00000551642 NLRP6P59044 892 aa13.89□□□□□ -0.19
DEPDC4-210ENST00000551642 SLAIN1Q8ND83 568 aa13.89□□□□□ -0.19
DEPDC4-210ENST00000551642 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
DEPDC4-210ENST00000551642 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
DEPDC4-210ENST00000551642 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
DEPDC4-210ENST00000551642 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
DEPDC4-210ENST00000551642 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
DEPDC4-210ENST00000551642 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
DEPDC4-210ENST00000551642 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
DEPDC4-210ENST00000551642 TMEM121BQ9BXQ6 578 aaPredicted RBP13.87□□□□□ -0.19
DEPDC4-210ENST00000551642 G3V3G9 751 aa13.85□□□□□ -0.19
DEPDC4-210ENST00000551642 MFRPQ9BY79 579 aa13.85□□□□□ -0.19
DEPDC4-210ENST00000551642 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms