RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 SPOCK2Q92563 424 aa14.45□□□□□ -0.1
GPN3-209ENST00000551079 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
GPN3-209ENST00000551079 GABBR2O75899 941 aa14.41□□□□□ -0.1
GPN3-209ENST00000551079 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
GPN3-209ENST00000551079 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
GPN3-209ENST00000551079 GSE1Q14687 1217 aa14.35□□□□□ -0.11
GPN3-209ENST00000551079 KIF12Q96FN5 646 aa14.29□□□□□ -0.12
GPN3-209ENST00000551079 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
GPN3-209ENST00000551079 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
GPN3-209ENST00000551079 MAP3K13O43283 966 aa14.23□□□□□ -0.13
GPN3-209ENST00000551079 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
GPN3-209ENST00000551079 PYGBP11216 843 aa14.22□□□□□ -0.13
GPN3-209ENST00000551079 SGIP1Q9BQI5 828 aa14.22□□□□□ -0.13
GPN3-209ENST00000551079 DCBLD2Q96PD2 775 aa14.19□□□□□ -0.14
GPN3-209ENST00000551079 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
GPN3-209ENST00000551079 CHRM1P11229 460 aaPredicted RBP14.16□□□□□ -0.14
GPN3-209ENST00000551079 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
GPN3-209ENST00000551079 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
GPN3-209ENST00000551079 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
GPN3-209ENST00000551079 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
GPN3-209ENST00000551079 TIE1P35590 1138 aa14.05□□□□□ -0.16
GPN3-209ENST00000551079 ASTLQ6HA08 431 aaPredicted RBP14.03□□□□□ -0.16
GPN3-209ENST00000551079 PCDHB8Q9UN66 801 aa14.03□□□□□ -0.16
GPN3-209ENST00000551079 TRPC6Q9Y210 931 aa14.03□□□□□ -0.16
GPN3-209ENST00000551079 LHX8Q68G74 356 aa14.02□□□□□ -0.17
GPN3-209ENST00000551079 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
GPN3-209ENST00000551079 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
GPN3-209ENST00000551079 BMP2KQ9NSY1 1161 aaPredicted RBP14□□□□□ -0.17
GPN3-209ENST00000551079 TTLL13PA6NNM8 815 aa13.96□□□□□ -0.17
GPN3-209ENST00000551079 PKD2Q13563 968 aa13.96□□□□□ -0.17
GPN3-209ENST00000551079 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
GPN3-209ENST00000551079 ATN1P54259 1190 aaPredicted RBP13.95□□□□□ -0.18
GPN3-209ENST00000551079 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
GPN3-209ENST00000551079 PDAP1Q13442 181 aaKnown RBP13.91□□□□□ -0.18
GPN3-209ENST00000551079 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
GPN3-209ENST00000551079 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
GPN3-209ENST00000551079 PSEN1P49768 467 aa13.9□□□□□ -0.18
GPN3-209ENST00000551079 SLC39A7Q92504 469 aa13.89□□□□□ -0.19
GPN3-209ENST00000551079 RNF25Q96BH1 459 aaPredicted RBP13.88□□□□□ -0.19
GPN3-209ENST00000551079 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
GPN3-209ENST00000551079 C7P10643 843 aa13.86□□□□□ -0.19
GPN3-209ENST00000551079 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
GPN3-209ENST00000551079 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
GPN3-209ENST00000551079 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
GPN3-209ENST00000551079 IER5LQ5T953 404 aa13.8□□□□□ -0.2
GPN3-209ENST00000551079 RGL2O15211 777 aa13.79□□□□□ -0.2
GPN3-209ENST00000551079 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
GPN3-209ENST00000551079 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
GPN3-209ENST00000551079 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
GPN3-209ENST00000551079 SEC24BO95487 1268 aa13.74□□□□□ -0.21
GPN3-209ENST00000551079 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
GPN3-209ENST00000551079 CABP2Q9NPB3 220 aa13.72□□□□□ -0.21
GPN3-209ENST00000551079 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
GPN3-209ENST00000551079 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
GPN3-209ENST00000551079 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
GPN3-209ENST00000551079 STK25O00506 426 aa13.66□□□□□ -0.22
GPN3-209ENST00000551079 PLCG2P16885 1265 aa13.66□□□□□ -0.22
GPN3-209ENST00000551079 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
GPN3-209ENST00000551079 COLQQ9Y215 455 aaPredicted RBP13.66□□□□□ -0.22
GPN3-209ENST00000551079 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
GPN3-209ENST00000551079 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
GPN3-209ENST00000551079 STK24Q9Y6E0 443 aa13.63□□□□□ -0.23
GPN3-209ENST00000551079 EFCAB3Q8N7B9 438 aa13.61□□□□□ -0.23
GPN3-209ENST00000551079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.61□□□□□ -0.234e-6■■■□□ 17.2
GPN3-209ENST00000551079 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
GPN3-209ENST00000551079 SOX12O15370 315 aa13.56□□□□□ -0.24
GPN3-209ENST00000551079 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
GPN3-209ENST00000551079 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
GPN3-209ENST00000551079 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
GPN3-209ENST00000551079 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
GPN3-209ENST00000551079 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
GPN3-209ENST00000551079 POTEJP0CG39 1038 aa13.52□□□□□ -0.25
GPN3-209ENST00000551079 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
GPN3-209ENST00000551079 SCUBE2Q9NQ36 999 aa13.5□□□□□ -0.25
GPN3-209ENST00000551079 L3MBTL3Q96JM7 780 aaPredicted RBP13.49□□□□□ -0.25
GPN3-209ENST00000551079 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
GPN3-209ENST00000551079 NLRP6P59044 892 aa13.47□□□□□ -0.25
GPN3-209ENST00000551079 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
GPN3-209ENST00000551079 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
GPN3-209ENST00000551079 MFRPQ9BY79 579 aa13.43□□□□□ -0.26
GPN3-209ENST00000551079 G3V3G9 751 aa13.42□□□□□ -0.26
GPN3-209ENST00000551079 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
GPN3-209ENST00000551079 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
GPN3-209ENST00000551079 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.26
GPN3-209ENST00000551079 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
GPN3-209ENST00000551079 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
GPN3-209ENST00000551079 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
GPN3-209ENST00000551079 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
GPN3-209ENST00000551079 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
GPN3-209ENST00000551079 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
GPN3-209ENST00000551079 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
GPN3-209ENST00000551079 POTEMA6NI47 508 aa13.29□□□□□ -0.28
GPN3-209ENST00000551079 MICALL2Q8IY33 904 aa13.29□□□□□ -0.28
GPN3-209ENST00000551079 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
GPN3-209ENST00000551079 PPP1R37O75864 691 aa13.21□□□□□ -0.29
GPN3-209ENST00000551079 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
GPN3-209ENST00000551079 GTPBP6O43824 516 aaPredicted RBP13.17□□□□□ -0.3
GPN3-209ENST00000551079 SNPHO15079 494 aa13.14□□□□□ -0.31
GPN3-209ENST00000551079 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
GPN3-209ENST00000551079 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms