RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-222ENST00000550889 SCRIBQ14160 1630 aa8.98□□□□□ -0.97
ATXN2-222ENST00000550889 SHROOM4Q9ULL8 1493 aa8.98□□□□□ -0.97
ATXN2-222ENST00000550889 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
ATXN2-222ENST00000550889 C19orf67A6NJJ6 358 aa8.97□□□□□ -0.97
ATXN2-222ENST00000550889 NUBP1P53384 320 aa8.97□□□□□ -0.97
ATXN2-222ENST00000550889 RASEFQ8IZ41 740 aa8.97□□□□□ -0.97
ATXN2-222ENST00000550889 TSPYL2Q9H2G4 693 aaPredicted RBP8.96□□□□□ -0.98
ATXN2-222ENST00000550889 PAK3O75914 559 aaPredicted RBP8.95□□□□□ -0.98
ATXN2-222ENST00000550889 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
ATXN2-222ENST00000550889 EVX2Q03828 476 aa8.93□□□□□ -0.98
ATXN2-222ENST00000550889 DCAF8Q5TAQ9 597 aa8.92□□□□□ -0.98
ATXN2-222ENST00000550889 FAM212AQ96EL1 285 aa8.92□□□□□ -0.98
ATXN2-222ENST00000550889 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
ATXN2-222ENST00000550889 GSE1Q14687 1217 aa8.86□□□□□ -0.99
ATXN2-222ENST00000550889 PHF12Q96QT6 1004 aa8.85□□□□□ -0.99
ATXN2-222ENST00000550889 CCDC61Q9Y6R9 512 aa8.85□□□□□ -0.99
ATXN2-222ENST00000550889 ZNF579Q8NAF0 562 aaKnown RBP8.83□□□□□ -1
ATXN2-222ENST00000550889 PYGBP11216 843 aa8.82□□□□□ -1
ATXN2-222ENST00000550889 SP7Q8TDD2 431 aaPredicted RBP8.81□□□□□ -1
ATXN2-222ENST00000550889 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
ATXN2-222ENST00000550889 EIF4G1Q04637 1599 aaKnown RBP8.77□□□□□ -1.01
ATXN2-222ENST00000550889 MAP3K13O43283 966 aa8.76□□□□□ -1.01
ATXN2-222ENST00000550889 GABBR2O75899 941 aa8.75□□□□□ -1.01
ATXN2-222ENST00000550889 PKD2Q13563 968 aa8.75□□□□□ -1.01
ATXN2-222ENST00000550889 ECM2O94769 699 aaPredicted RBP8.74□□□□□ -1.01
ATXN2-222ENST00000550889 PCDHB13Q9Y5F0 798 aa8.74□□□□□ -1.01
ATXN2-222ENST00000550889 TRIM41Q8WV44 630 aa8.74□□□□□ -1.01
ATXN2-222ENST00000550889 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
ATXN2-222ENST00000550889 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
ATXN2-222ENST00000550889 CHRM1P11229 460 aaPredicted RBP8.71□□□□□ -1.01
ATXN2-222ENST00000550889 CLCN6P51797 869 aa8.71□□□□□ -1.01
ATXN2-222ENST00000550889 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.01
ATXN2-222ENST00000550889 RTN4Q9NQC3 1192 aaKnown RBP8.71□□□□□ -1.02
ATXN2-222ENST00000550889 CC2D2AQ9P2K1 1620 aa8.7□□□□□ -1.02
ATXN2-222ENST00000550889 IFNL1Q8IU54 200 aa8.69□□□□□ -1.02
ATXN2-222ENST00000550889 PCDHB8Q9UN66 801 aa8.69□□□□□ -1.02
ATXN2-222ENST00000550889 CECR2Q9BXF3 1484 aa8.69□□□□□ -1.02
ATXN2-222ENST00000550889 SGIP1Q9BQI5 828 aa8.68□□□□□ -1.02
ATXN2-222ENST00000550889 BAZ1AQ9NRL2 1556 aaPredicted RBP8.66□□□□□ -1.02
ATXN2-222ENST00000550889 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
ATXN2-222ENST00000550889 RGL2O15211 777 aa8.65□□□□□ -1.03
ATXN2-222ENST00000550889 RNF25Q96BH1 459 aaPredicted RBP8.65□□□□□ -1.03
ATXN2-222ENST00000550889 TRPC6Q9Y210 931 aa8.65□□□□□ -1.03
ATXN2-222ENST00000550889 DCBLD2Q96PD2 775 aa8.63□□□□□ -1.03
ATXN2-222ENST00000550889 NCAPD3P42695 1498 aa8.63□□□□□ -1.03
ATXN2-222ENST00000550889 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
ATXN2-222ENST00000550889 RIOK3O14730 519 aaKnown RBP8.63□□□□□ -1.03
ATXN2-222ENST00000550889 ATAD2BQ9ULI0 1458 aa8.62□□□□□ -1.03
ATXN2-222ENST00000550889 SMARCA2P51531 1590 aa8.6□□□□□ -1.03
ATXN2-222ENST00000550889 MROH2BQ7Z745 1585 aa8.6□□□□□ -1.03
ATXN2-222ENST00000550889 PEG3Q9GZU2 1588 aa8.59□□□□□ -1.03
ATXN2-222ENST00000550889 PSEN1P49768 467 aa8.59□□□□□ -1.03
ATXN2-222ENST00000550889 TMEM106CQ9BVX2 250 aa8.59□□□□□ -1.03
ATXN2-222ENST00000550889 BMP2KQ9NSY1 1161 aaPredicted RBP8.59□□□□□ -1.03
ATXN2-222ENST00000550889 TIE1P35590 1138 aa8.58□□□□□ -1.04
ATXN2-222ENST00000550889 PDAP1Q13442 181 aaKnown RBP8.58□□□□□ -1.04
ATXN2-222ENST00000550889 DNAJC5Q9H3Z4 198 aa8.58□□□□□ -1.04
ATXN2-222ENST00000550889 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
ATXN2-222ENST00000550889 TTLL13PA6NNM8 815 aa8.56□□□□□ -1.04
ATXN2-222ENST00000550889 POTEIP0CG38 1075 aa8.56□□□□□ -1.04
ATXN2-222ENST00000550889 TAOK2Q9UL54 1235 aa8.56□□□□□ -1.04
ATXN2-222ENST00000550889 HMGXB3Q12766 1538 aa8.56□□□□□ -1.04
ATXN2-222ENST00000550889 RSF1Q96T23 1441 aaPredicted RBP8.56□□□□□ -1.04
ATXN2-222ENST00000550889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
ATXN2-222ENST00000550889 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
ATXN2-222ENST00000550889 ZFP91Q96JP5 570 aaPredicted RBP8.55□□□□□ -1.04
ATXN2-222ENST00000550889 ATN1P54259 1190 aaPredicted RBP8.54□□□□□ -1.04
ATXN2-222ENST00000550889 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
ATXN2-222ENST00000550889 BAZ1BQ9UIG0 1483 aaKnown RBP8.53□□□□□ -1.04
ATXN2-222ENST00000550889 STK25O00506 426 aa8.51□□□□□ -1.05
ATXN2-222ENST00000550889 TRIM35Q9UPQ4 493 aa8.51□□□□□ -1.05
ATXN2-222ENST00000550889 GOLGA2Q08379 1002 aa8.51□□□□□ -1.05
ATXN2-222ENST00000550889 PELP1Q8IZL8 1130 aaKnown RBP8.51□□□□□ -1.05
ATXN2-222ENST00000550889 BCL11BQ9C0K0 894 aaPredicted RBP8.5□□□□□ -1.05
ATXN2-222ENST00000550889 CABP2Q9NPB3 220 aa8.5□□□□□ -1.05
ATXN2-222ENST00000550889 STK24Q9Y6E0 443 aa8.5□□□□□ -1.05
ATXN2-222ENST00000550889 CHGAP10645 457 aaKnown RBP8.49□□□□□ -1.05
ATXN2-222ENST00000550889 WIZO95785 1651 aa8.47□□□□□ -1.05
ATXN2-222ENST00000550889 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
ATXN2-222ENST00000550889 SLC39A7Q92504 469 aa8.45□□□□□ -1.06
ATXN2-222ENST00000550889 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
ATXN2-222ENST00000550889 EFCAB3Q8N7B9 438 aa8.43□□□□□ -1.06
ATXN2-222ENST00000550889 METRNQ9UJH8 293 aa8.43□□□□□ -1.06
ATXN2-222ENST00000550889 TOP2AP11388 1531 aaKnown RBP8.42□□□□□ -1.06
ATXN2-222ENST00000550889 C7P10643 843 aa8.42□□□□□ -1.06
ATXN2-222ENST00000550889 SEC24BO95487 1268 aa8.41□□□□□ -1.06
ATXN2-222ENST00000550889 IER5LQ5T953 404 aa8.41□□□□□ -1.06
ATXN2-222ENST00000550889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.07
ATXN2-222ENST00000550889 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
ATXN2-222ENST00000550889 PLCG2P16885 1265 aa8.37□□□□□ -1.07
ATXN2-222ENST00000550889 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
ATXN2-222ENST00000550889 IRX5P78411 483 aaPredicted RBP8.37□□□□□ -1.07
ATXN2-222ENST00000550889 POTEFA5A3E0 1075 aa8.36□□□□□ -1.07
ATXN2-222ENST00000550889 SOX12O15370 315 aa8.36□□□□□ -1.07
ATXN2-222ENST00000550889 OCEL1Q9H607 264 aa8.36□□□□□ -1.07
ATXN2-222ENST00000550889 PHF8Q9UPP1 1060 aa8.36□□□□□ -1.07
ATXN2-222ENST00000550889 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
ATXN2-222ENST00000550889 SUPT5HO00267 1087 aaKnown RBP8.34□□□□□ -1.07
ATXN2-222ENST00000550889 NESP48681 1621 aa8.34□□□□□ -1.07
ATXN2-222ENST00000550889 CCDC88BA6NC98 1476 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms