RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-214ENST00000550847 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
RAB3IP-214ENST00000550847 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
RAB3IP-214ENST00000550847 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-214ENST00000550847 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
RAB3IP-214ENST00000550847 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
RAB3IP-214ENST00000550847 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
RAB3IP-214ENST00000550847 MAP3K13O43283 966 aa12.66□□□□□ -0.38
RAB3IP-214ENST00000550847 PYGBP11216 843 aa12.64□□□□□ -0.39
RAB3IP-214ENST00000550847 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
RAB3IP-214ENST00000550847 CLCN6P51797 869 aa12.63□□□□□ -0.39
RAB3IP-214ENST00000550847 GSE1Q14687 1217 aa12.63□□□□□ -0.39
RAB3IP-214ENST00000550847 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
RAB3IP-214ENST00000550847 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
RAB3IP-214ENST00000550847 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
RAB3IP-214ENST00000550847 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
RAB3IP-214ENST00000550847 CHRM1P11229 460 aaPredicted RBP12.52□□□□□ -0.41
RAB3IP-214ENST00000550847 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
RAB3IP-214ENST00000550847 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
RAB3IP-214ENST00000550847 DCBLD2Q96PD2 775 aa12.5□□□□□ -0.41
RAB3IP-214ENST00000550847 PKD2Q13563 968 aa12.48□□□□□ -0.41
RAB3IP-214ENST00000550847 BMP2KQ9NSY1 1161 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-214ENST00000550847 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-214ENST00000550847 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
RAB3IP-214ENST00000550847 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
RAB3IP-214ENST00000550847 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
RAB3IP-214ENST00000550847 TTLL13PA6NNM8 815 aa12.42□□□□□ -0.42
RAB3IP-214ENST00000550847 TIE1P35590 1138 aa12.42□□□□□ -0.42
RAB3IP-214ENST00000550847 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
RAB3IP-214ENST00000550847 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
RAB3IP-214ENST00000550847 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
RAB3IP-214ENST00000550847 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
RAB3IP-214ENST00000550847 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
RAB3IP-214ENST00000550847 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
RAB3IP-214ENST00000550847 RGL2O15211 777 aa12.32□□□□□ -0.44
RAB3IP-214ENST00000550847 PSEN1P49768 467 aa12.32□□□□□ -0.44
RAB3IP-214ENST00000550847 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
RAB3IP-214ENST00000550847 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
RAB3IP-214ENST00000550847 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
RAB3IP-214ENST00000550847 POTEFA5A3E0 1075 aa12.26□□□□□ -0.45
RAB3IP-214ENST00000550847 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
RAB3IP-214ENST00000550847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-214ENST00000550847 POTEB2H3BUK9 544 aa12.23□□□□□ -0.45
RAB3IP-214ENST00000550847 C7P10643 843 aa12.23□□□□□ -0.45
RAB3IP-214ENST00000550847 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-214ENST00000550847 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
RAB3IP-214ENST00000550847 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-214ENST00000550847 LHX8Q68G74 356 aa12.18□□□□□ -0.46
RAB3IP-214ENST00000550847 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
RAB3IP-214ENST00000550847 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-214ENST00000550847 IER5LQ5T953 404 aa12.17□□□□□ -0.46
RAB3IP-214ENST00000550847 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-214ENST00000550847 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
RAB3IP-214ENST00000550847 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-214ENST00000550847 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
RAB3IP-214ENST00000550847 SEC24BO95487 1268 aa12.1□□□□□ -0.47
RAB3IP-214ENST00000550847 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-214ENST00000550847 STK25O00506 426 aa12.09□□□□□ -0.47
RAB3IP-214ENST00000550847 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
RAB3IP-214ENST00000550847 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-214ENST00000550847 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-214ENST00000550847 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-214ENST00000550847 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
RAB3IP-214ENST00000550847 PLCG2P16885 1265 aa12.07□□□□□ -0.48
RAB3IP-214ENST00000550847 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
RAB3IP-214ENST00000550847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
RAB3IP-214ENST00000550847 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
RAB3IP-214ENST00000550847 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
RAB3IP-214ENST00000550847 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
RAB3IP-214ENST00000550847 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
RAB3IP-214ENST00000550847 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
RAB3IP-214ENST00000550847 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
RAB3IP-214ENST00000550847 MS4A4AQ96JQ5 239 aa11.99□□□□□ -0.49
RAB3IP-214ENST00000550847 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
RAB3IP-214ENST00000550847 SOX12O15370 315 aa11.96□□□□□ -0.49
RAB3IP-214ENST00000550847 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
RAB3IP-214ENST00000550847 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
RAB3IP-214ENST00000550847 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-214ENST00000550847 NLRP6P59044 892 aa11.88□□□□□ -0.51
RAB3IP-214ENST00000550847 MAMSTRQ6ZN01 415 aa11.88□□□□□ -0.51
RAB3IP-214ENST00000550847 DNAJC5Q9H3Z4 198 aa11.88□□□□□ -0.51
RAB3IP-214ENST00000550847 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
RAB3IP-214ENST00000550847 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
RAB3IP-214ENST00000550847 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
RAB3IP-214ENST00000550847 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-214ENST00000550847 PPP1R37O75864 691 aa11.82□□□□□ -0.52
RAB3IP-214ENST00000550847 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
RAB3IP-214ENST00000550847 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
RAB3IP-214ENST00000550847 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
RAB3IP-214ENST00000550847 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
RAB3IP-214ENST00000550847 TMEM92Q6UXU6 159 aa11.75□□□□□ -0.53
RAB3IP-214ENST00000550847 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
RAB3IP-214ENST00000550847 G3V3G9 751 aa11.73□□□□□ -0.53
RAB3IP-214ENST00000550847 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
RAB3IP-214ENST00000550847 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
RAB3IP-214ENST00000550847 KIF3CO14782 793 aa11.61□□□□□ -0.55
RAB3IP-214ENST00000550847 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
RAB3IP-214ENST00000550847 FAM163AQ96GL9 167 aaPredicted RBP11.59□□□□□ -0.55
RAB3IP-214ENST00000550847 C2orf72A6NCS6 295 aa11.58□□□□□ -0.56
RAB3IP-214ENST00000550847 HOXB3P14651 431 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms