RNA–Protein interactions for RNA: ENST00000550815.1

LMBR1L-215, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-215ENST00000550815 PROM2Q8N271 834 aa11.92□□□□□ -0.5
LMBR1L-215ENST00000550815 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
LMBR1L-215ENST00000550815 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
LMBR1L-215ENST00000550815 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
LMBR1L-215ENST00000550815 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
LMBR1L-215ENST00000550815 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
LMBR1L-215ENST00000550815 C7P10643 843 aa11.86□□□□□ -0.51
LMBR1L-215ENST00000550815 MIER1Q8N108 512 aa11.85□□□□□ -0.51
LMBR1L-215ENST00000550815 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
LMBR1L-215ENST00000550815 CCDC180Q9P1Z9 1646 aa11.82□□□□□ -0.52
LMBR1L-215ENST00000550815 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
LMBR1L-215ENST00000550815 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
LMBR1L-215ENST00000550815 POTEMA6NI47 508 aa11.77□□□□□ -0.53
LMBR1L-215ENST00000550815 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
LMBR1L-215ENST00000550815 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
LMBR1L-215ENST00000550815 MAP3K13O43283 966 aa11.74□□□□□ -0.53
LMBR1L-215ENST00000550815 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
LMBR1L-215ENST00000550815 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
LMBR1L-215ENST00000550815 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
LMBR1L-215ENST00000550815 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
LMBR1L-215ENST00000550815 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
LMBR1L-215ENST00000550815 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.53
LMBR1L-215ENST00000550815 TIE1P35590 1138 aa11.68□□□□□ -0.54
LMBR1L-215ENST00000550815 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
LMBR1L-215ENST00000550815 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
LMBR1L-215ENST00000550815 SEC24BO95487 1268 aa11.63□□□□□ -0.55
LMBR1L-215ENST00000550815 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
LMBR1L-215ENST00000550815 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
LMBR1L-215ENST00000550815 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
LMBR1L-215ENST00000550815 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
LMBR1L-215ENST00000550815 NUBP1P53384 320 aa11.57□□□□□ -0.56
LMBR1L-215ENST00000550815 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
LMBR1L-215ENST00000550815 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
LMBR1L-215ENST00000550815 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
LMBR1L-215ENST00000550815 FKBP8Q14318 412 aa11.54□□□□□ -0.56
LMBR1L-215ENST00000550815 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
LMBR1L-215ENST00000550815 IER5LQ5T953 404 aa11.52□□□□□ -0.57
LMBR1L-215ENST00000550815 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
LMBR1L-215ENST00000550815 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
LMBR1L-215ENST00000550815 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
LMBR1L-215ENST00000550815 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
LMBR1L-215ENST00000550815 RB1CC1Q8TDY2 1594 aa11.44□□□□□ -0.58
LMBR1L-215ENST00000550815 PLCG2P16885 1265 aa11.43□□□□□ -0.58
LMBR1L-215ENST00000550815 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
LMBR1L-215ENST00000550815 PYGBP11216 843 aa11.39□□□□□ -0.59
LMBR1L-215ENST00000550815 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
LMBR1L-215ENST00000550815 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
LMBR1L-215ENST00000550815 CDAN1Q8IWY9 1227 aa11.34□□□□□ -0.59
LMBR1L-215ENST00000550815 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
LMBR1L-215ENST00000550815 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
LMBR1L-215ENST00000550815 ST18O60284 1047 aa11.31□□□□□ -0.6
LMBR1L-215ENST00000550815 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
LMBR1L-215ENST00000550815 DCAF8L2P0C7V8 631 aa11.29□□□□□ -0.6
LMBR1L-215ENST00000550815 NACADO15069 1562 aa11.26□□□□□ -0.61
LMBR1L-215ENST00000550815 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.26□□□□□ -0.61
LMBR1L-215ENST00000550815 GSE1Q14687 1217 aa11.24□□□□□ -0.61
LMBR1L-215ENST00000550815 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
LMBR1L-215ENST00000550815 SNPHO15079 494 aa11.21□□□□□ -0.61
LMBR1L-215ENST00000550815 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
LMBR1L-215ENST00000550815 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
LMBR1L-215ENST00000550815 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
LMBR1L-215ENST00000550815 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
LMBR1L-215ENST00000550815 TMEM121BQ9BXQ6 578 aaPredicted RBP11.16□□□□□ -0.62
LMBR1L-215ENST00000550815 C3orf67Q6ZVT6 689 aa11.15□□□□□ -0.62
LMBR1L-215ENST00000550815 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
LMBR1L-215ENST00000550815 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
LMBR1L-215ENST00000550815 PSEN1P49768 467 aa11.13□□□□□ -0.63
LMBR1L-215ENST00000550815 PDCD7Q8N8D1 485 aaKnown RBP11.13□□□□□ -0.63
LMBR1L-215ENST00000550815 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
LMBR1L-215ENST00000550815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.13□□□□□ -0.63
LMBR1L-215ENST00000550815 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
LMBR1L-215ENST00000550815 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
LMBR1L-215ENST00000550815 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
LMBR1L-215ENST00000550815 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
LMBR1L-215ENST00000550815 MMRN1Q13201 1228 aa11.04□□□□□ -0.64
LMBR1L-215ENST00000550815 EMP3P54852 163 aa11.03□□□□□ -0.64
LMBR1L-215ENST00000550815 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
LMBR1L-215ENST00000550815 CECR2Q9BXF3 1484 aa11.01□□□□□ -0.65
LMBR1L-215ENST00000550815 G3V3G9 751 aa11.01□□□□□ -0.65
LMBR1L-215ENST00000550815 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
LMBR1L-215ENST00000550815 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
LMBR1L-215ENST00000550815 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
LMBR1L-215ENST00000550815 DNAJC5Q9H3Z4 198 aa10.98□□□□□ -0.65
LMBR1L-215ENST00000550815 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
LMBR1L-215ENST00000550815 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
LMBR1L-215ENST00000550815 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
LMBR1L-215ENST00000550815 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
LMBR1L-215ENST00000550815 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
LMBR1L-215ENST00000550815 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
LMBR1L-215ENST00000550815 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
LMBR1L-215ENST00000550815 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
LMBR1L-215ENST00000550815 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
LMBR1L-215ENST00000550815 EIF4G1Q04637 1599 aaKnown RBP10.87□□□□□ -0.67
LMBR1L-215ENST00000550815 ZNF710Q8N1W2 664 aa10.87□□□□□ -0.67
LMBR1L-215ENST00000550815 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
LMBR1L-215ENST00000550815 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
LMBR1L-215ENST00000550815 HOXB3P14651 431 aaPredicted RBP10.85□□□□□ -0.67
LMBR1L-215ENST00000550815 EFCAB3Q8N7B9 438 aa10.84□□□□□ -0.67
LMBR1L-215ENST00000550815 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
LMBR1L-215ENST00000550815 DOK7Q18PE1 504 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms