RNA–Protein interactions for RNA: ENST00000550224.5

PRIM1-205, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,206 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-205ENST00000550224 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
PRIM1-205ENST00000550224 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
PRIM1-205ENST00000550224 FKBP8Q14318 412 aa12.43□□□□□ -0.42
PRIM1-205ENST00000550224 POTEMA6NI47 508 aa12.42□□□□□ -0.42
PRIM1-205ENST00000550224 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRIM1-205ENST00000550224 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
PRIM1-205ENST00000550224 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
PRIM1-205ENST00000550224 SHROOM4Q9ULL8 1493 aa12.38□□□□□ -0.43
PRIM1-205ENST00000550224 PELP1Q8IZL8 1130 aaKnown RBP12.35□□□□□ -0.43
PRIM1-205ENST00000550224 METRNQ9UJH8 293 aa12.29□□□□□ -0.44
PRIM1-205ENST00000550224 C7P10643 843 aa12.25□□□□□ -0.45
PRIM1-205ENST00000550224 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
PRIM1-205ENST00000550224 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
PRIM1-205ENST00000550224 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
PRIM1-205ENST00000550224 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
PRIM1-205ENST00000550224 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
PRIM1-205ENST00000550224 FAM163AQ96GL9 167 aaPredicted RBP12.22□□□□□ -0.45
PRIM1-205ENST00000550224 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
PRIM1-205ENST00000550224 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
PRIM1-205ENST00000550224 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
PRIM1-205ENST00000550224 SCRIBQ14160 1630 aa12.18□□□□□ -0.46
PRIM1-205ENST00000550224 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
PRIM1-205ENST00000550224 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
PRIM1-205ENST00000550224 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
PRIM1-205ENST00000550224 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
PRIM1-205ENST00000550224 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
PRIM1-205ENST00000550224 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
PRIM1-205ENST00000550224 SEC24BO95487 1268 aa12□□□□□ -0.49
PRIM1-205ENST00000550224 LCE2DQ5TA82 110 aaPredicted RBP12□□□□□ -0.49
PRIM1-205ENST00000550224 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
PRIM1-205ENST00000550224 BMP2KQ9NSY1 1161 aaPredicted RBP11.99□□□□□ -0.49
PRIM1-205ENST00000550224 MAP3K13O43283 966 aa11.96□□□□□ -0.49
PRIM1-205ENST00000550224 MIER1Q8N108 512 aa11.96□□□□□ -0.49
PRIM1-205ENST00000550224 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
PRIM1-205ENST00000550224 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
PRIM1-205ENST00000550224 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
PRIM1-205ENST00000550224 TIE1P35590 1138 aa11.92□□□□□ -0.5
PRIM1-205ENST00000550224 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
PRIM1-205ENST00000550224 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
PRIM1-205ENST00000550224 CDAN1Q8IWY9 1227 aa11.89□□□□□ -0.51
PRIM1-205ENST00000550224 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
PRIM1-205ENST00000550224 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
PRIM1-205ENST00000550224 TTLL13PA6NNM8 815 aa11.87□□□□□ -0.51
PRIM1-205ENST00000550224 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
PRIM1-205ENST00000550224 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
PRIM1-205ENST00000550224 BICRAQ9NZM4 1560 aa11.85□□□□□ -0.51
PRIM1-205ENST00000550224 RSF1Q96T23 1441 aaPredicted RBP11.84□□□□□ -0.51
PRIM1-205ENST00000550224 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
PRIM1-205ENST00000550224 SLAIN1Q8ND83 568 aa11.81□□□□□ -0.52
PRIM1-205ENST00000550224 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
PRIM1-205ENST00000550224 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
PRIM1-205ENST00000550224 NUBP1P53384 320 aa11.78□□□□□ -0.52
PRIM1-205ENST00000550224 IER5LQ5T953 404 aa11.77□□□□□ -0.53
PRIM1-205ENST00000550224 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
PRIM1-205ENST00000550224 ST18O60284 1047 aa11.74□□□□□ -0.53
PRIM1-205ENST00000550224 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
PRIM1-205ENST00000550224 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
PRIM1-205ENST00000550224 PLCG2P16885 1265 aa11.72□□□□□ -0.53
PRIM1-205ENST00000550224 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
PRIM1-205ENST00000550224 SMARCA4P51532 1647 aa11.71□□□□□ -0.53
PRIM1-205ENST00000550224 TMEM106CQ9BVX2 250 aa11.71□□□□□ -0.53
PRIM1-205ENST00000550224 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
PRIM1-205ENST00000550224 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
PRIM1-205ENST00000550224 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
PRIM1-205ENST00000550224 FAM212AQ96EL1 285 aa11.62□□□□□ -0.55
PRIM1-205ENST00000550224 PEG3Q9GZU2 1588 aa11.61□□□□□ -0.55
PRIM1-205ENST00000550224 WIZO95785 1651 aa11.61□□□□□ -0.55
PRIM1-205ENST00000550224 MMRN1Q13201 1228 aa11.59□□□□□ -0.55
PRIM1-205ENST00000550224 SNPHO15079 494 aa11.58□□□□□ -0.56
PRIM1-205ENST00000550224 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
PRIM1-205ENST00000550224 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
PRIM1-205ENST00000550224 SPNS2Q8IVW8 549 aa11.57□□□□□ -0.56
PRIM1-205ENST00000550224 SPOCK2Q92563 424 aa11.57□□□□□ -0.56
PRIM1-205ENST00000550224 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
PRIM1-205ENST00000550224 OCEL1Q9H607 264 aa11.57□□□□□ -0.56
PRIM1-205ENST00000550224 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
PRIM1-205ENST00000550224 EIF4G1Q04637 1599 aaKnown RBP11.57□□□□□ -0.56
PRIM1-205ENST00000550224 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
PRIM1-205ENST00000550224 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
PRIM1-205ENST00000550224 BAZ1BQ9UIG0 1483 aaKnown RBP11.55□□□□□ -0.56
PRIM1-205ENST00000550224 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
PRIM1-205ENST00000550224 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
PRIM1-205ENST00000550224 PYGBP11216 843 aa11.5□□□□□ -0.57
PRIM1-205ENST00000550224 HMGXB3Q12766 1538 aa11.48□□□□□ -0.57
PRIM1-205ENST00000550224 CCDC88BA6NC98 1476 aa11.46□□□□□ -0.57
PRIM1-205ENST00000550224 GSE1Q14687 1217 aa11.46□□□□□ -0.57
PRIM1-205ENST00000550224 PCDHB8Q9UN66 801 aa11.46□□□□□ -0.57
PRIM1-205ENST00000550224 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
PRIM1-205ENST00000550224 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
PRIM1-205ENST00000550224 EMP3P54852 163 aa11.42□□□□□ -0.58
PRIM1-205ENST00000550224 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
PRIM1-205ENST00000550224 CIZ1Q9ULV3 898 aaPredicted RBP11.4□□□□□ -0.58
PRIM1-205ENST00000550224 CC2D2AQ9P2K1 1620 aa11.38□□□□□ -0.59
PRIM1-205ENST00000550224 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
PRIM1-205ENST00000550224 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
PRIM1-205ENST00000550224 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
PRIM1-205ENST00000550224 FAM205CA6NFA0 338 aa11.36□□□□□ -0.59
PRIM1-205ENST00000550224 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
PRIM1-205ENST00000550224 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
PRIM1-205ENST00000550224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms