RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 TSPYL2Q9H2G4 693 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-207ENST00000549915 RASEFQ8IZ41 740 aa7.1□□□□□ -1.27
RAB5B-207ENST00000549915 TRIM41Q8WV44 630 aa7.1□□□□□ -1.27
RAB5B-207ENST00000549915 SGIP1Q9BQI5 828 aa7.1□□□□□ -1.27
RAB5B-207ENST00000549915 GABBR2O75899 941 aa7.09□□□□□ -1.27
RAB5B-207ENST00000549915 CCDC61Q9Y6R9 512 aa7.09□□□□□ -1.27
RAB5B-207ENST00000549915 IFNLR1Q8IU57 520 aaPredicted RBP7.08□□□□□ -1.28
RAB5B-207ENST00000549915 DCAF8Q5TAQ9 597 aa7.07□□□□□ -1.28
RAB5B-207ENST00000549915 DCBLD2Q96PD2 775 aa7.04□□□□□ -1.28
RAB5B-207ENST00000549915 PHF12Q96QT6 1004 aa7.04□□□□□ -1.28
RAB5B-207ENST00000549915 KIF12Q96FN5 646 aa7.03□□□□□ -1.28
RAB5B-207ENST00000549915 CHRM1P11229 460 aaPredicted RBP7.02□□□□□ -1.29
RAB5B-207ENST00000549915 ZNF467Q7Z7K2 595 aaPredicted RBP7□□□□□ -1.29
RAB5B-207ENST00000549915 CIZ1Q9ULV3 898 aaPredicted RBP7□□□□□ -1.29
RAB5B-207ENST00000549915 PCDHB13Q9Y5F0 798 aa7□□□□□ -1.29
RAB5B-207ENST00000549915 MS4A3Q96HJ5 214 aa6.99□□□□□ -1.29
RAB5B-207ENST00000549915 GALR2O43603 387 aaPredicted RBP6.98□□□□□ -1.29
RAB5B-207ENST00000549915 TIE1P35590 1138 aa6.98□□□□□ -1.29
RAB5B-207ENST00000549915 MAP3K13O43283 966 aa6.97□□□□□ -1.29
RAB5B-207ENST00000549915 TAOK2Q9UL54 1235 aa6.97□□□□□ -1.29
RAB5B-207ENST00000549915 PYGBP11216 843 aa6.95□□□□□ -1.3
RAB5B-207ENST00000549915 ASTLQ6HA08 431 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-207ENST00000549915 SLC39A7Q92504 469 aa6.92□□□□□ -1.3
RAB5B-207ENST00000549915 IFNL1Q8IU54 200 aa6.91□□□□□ -1.3
RAB5B-207ENST00000549915 C7P10643 843 aa6.9□□□□□ -1.3
RAB5B-207ENST00000549915 ATMINO43313 823 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-207ENST00000549915 PDAP1Q13442 181 aaKnown RBP6.89□□□□□ -1.31
RAB5B-207ENST00000549915 IER5LQ5T953 404 aa6.89□□□□□ -1.31
RAB5B-207ENST00000549915 BMP2KQ9NSY1 1161 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-207ENST00000549915 TTLL13PA6NNM8 815 aa6.87□□□□□ -1.31
RAB5B-207ENST00000549915 GOLGA2Q08379 1002 aa6.87□□□□□ -1.31
RAB5B-207ENST00000549915 TMEM106CQ9BVX2 250 aa6.87□□□□□ -1.31
RAB5B-207ENST00000549915 RIOK3O14730 519 aaKnown RBP6.86□□□□□ -1.31
RAB5B-207ENST00000549915 ECM2O94769 699 aaPredicted RBP6.86□□□□□ -1.31
RAB5B-207ENST00000549915 POTEIP0CG38 1075 aa6.86□□□□□ -1.31
RAB5B-207ENST00000549915 VGFO15240 615 aaPredicted RBP6.85□□□□□ -1.31
RAB5B-207ENST00000549915 PSEN1P49768 467 aa6.84□□□□□ -1.31
RAB5B-207ENST00000549915 PCDHB8Q9UN66 801 aa6.84□□□□□ -1.31
RAB5B-207ENST00000549915 TRIM35Q9UPQ4 493 aa6.84□□□□□ -1.31
RAB5B-207ENST00000549915 ATN1P54259 1190 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-207ENST00000549915 METRNQ9UJH8 293 aa6.83□□□□□ -1.32
RAB5B-207ENST00000549915 MKRN3Q13064 507 aaKnown RBP6.82□□□□□ -1.32
RAB5B-207ENST00000549915 SEC24BO95487 1268 aa6.81□□□□□ -1.32
RAB5B-207ENST00000549915 MAMSTRQ6ZN01 415 aa6.81□□□□□ -1.32
RAB5B-207ENST00000549915 TRPC6Q9Y210 931 aa6.81□□□□□ -1.32
RAB5B-207ENST00000549915 PLCG2P16885 1265 aa6.79□□□□□ -1.32
RAB5B-207ENST00000549915 PKD2Q13563 968 aa6.79□□□□□ -1.32
RAB5B-207ENST00000549915 LHX8Q68G74 356 aa6.79□□□□□ -1.32
RAB5B-207ENST00000549915 AMER1Q5JTC6 1135 aaPredicted RBP6.77□□□□□ -1.33
RAB5B-207ENST00000549915 PELP1Q8IZL8 1130 aaKnown RBP6.77□□□□□ -1.33
RAB5B-207ENST00000549915 OCEL1Q9H607 264 aa6.76□□□□□ -1.33
RAB5B-207ENST00000549915 RNF25Q96BH1 459 aaPredicted RBP6.75□□□□□ -1.33
RAB5B-207ENST00000549915 SCUBE2Q9NQ36 999 aa6.75□□□□□ -1.33
RAB5B-207ENST00000549915 SOX12O15370 315 aa6.74□□□□□ -1.33
RAB5B-207ENST00000549915 CABP2Q9NPB3 220 aa6.74□□□□□ -1.33
RAB5B-207ENST00000549915 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-207ENST00000549915 IRX5P78411 483 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-207ENST00000549915 L3MBTL3Q96JM7 780 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-207ENST00000549915 ZFP91Q96JP5 570 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-207ENST00000549915 STK25O00506 426 aa6.72□□□□□ -1.33
RAB5B-207ENST00000549915 G3V3G9 751 aa6.71□□□□□ -1.34
RAB5B-207ENST00000549915 RGL2O15211 777 aa6.71□□□□□ -1.34
RAB5B-207ENST00000549915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.71□□□□□ -1.34
RAB5B-207ENST00000549915 BCL11BQ9C0K0 894 aaPredicted RBP6.7□□□□□ -1.34
RAB5B-207ENST00000549915 RYDENQ9NUL5 291 aaKnown RBP6.7□□□□□ -1.34
RAB5B-207ENST00000549915 STK24Q9Y6E0 443 aa6.7□□□□□ -1.34
RAB5B-207ENST00000549915 NLRP6P59044 892 aa6.68□□□□□ -1.34
RAB5B-207ENST00000549915 ILDR1Q86SU0 546 aaPredicted RBP6.68□□□□□ -1.34
RAB5B-207ENST00000549915 HS6ST3Q8IZP7 471 aa6.68□□□□□ -1.34
RAB5B-207ENST00000549915 EFCAB3Q8N7B9 438 aa6.67□□□□□ -1.34
RAB5B-207ENST00000549915 COLQQ9Y215 455 aaPredicted RBP6.67□□□□□ -1.34
RAB5B-207ENST00000549915 C3orf67Q6ZVT6 689 aa6.66□□□□□ -1.34
RAB5B-207ENST00000549915 POTEFA5A3E0 1075 aa6.65□□□□□ -1.34
RAB5B-207ENST00000549915 PDCD7Q8N8D1 485 aaKnown RBP6.65□□□□□ -1.34
RAB5B-207ENST00000549915 DNAJC5Q9H3Z4 198 aa6.64□□□□□ -1.35
RAB5B-207ENST00000549915 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.64□□□□□ -1.35
RAB5B-207ENST00000549915 POTEB2H3BUK9 544 aa6.62□□□□□ -1.35
RAB5B-207ENST00000549915 DCAF8L2P0C7V8 631 aa6.62□□□□□ -1.35
RAB5B-207ENST00000549915 CHGAP10645 457 aaKnown RBP6.62□□□□□ -1.35
RAB5B-207ENST00000549915 BOLA1Q9Y3E2 137 aa6.62□□□□□ -1.35
RAB5B-207ENST00000549915 OTUD5Q96G74 571 aa6.61□□□□□ -1.35
RAB5B-207ENST00000549915 SNPHO15079 494 aa6.6□□□□□ -1.35
RAB5B-207ENST00000549915 PHF8Q9UPP1 1060 aa6.58□□□□□ -1.36
RAB5B-207ENST00000549915 SLAIN1Q8ND83 568 aa6.57□□□□□ -1.36
RAB5B-207ENST00000549915 FBXO22Q8NEZ5 403 aa6.57□□□□□ -1.36
RAB5B-207ENST00000549915 TMEM121BQ9BXQ6 578 aaPredicted RBP6.57□□□□□ -1.36
RAB5B-207ENST00000549915 MFRPQ9BY79 579 aa6.57□□□□□ -1.36
RAB5B-207ENST00000549915 POTEJP0CG39 1038 aa6.56□□□□□ -1.36
RAB5B-207ENST00000549915 MICALL2Q8IY33 904 aa6.55□□□□□ -1.36
RAB5B-207ENST00000549915 RTN4Q9NQC3 1192 aaKnown RBP6.55□□□□□ -1.36
RAB5B-207ENST00000549915 MS4A4AQ96JQ5 239 aa6.53□□□□□ -1.36
RAB5B-207ENST00000549915 DPY19L2Q6NUT2 758 aa6.52□□□□□ -1.37
RAB5B-207ENST00000549915 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.52□□□□□ -1.37
RAB5B-207ENST00000549915 BBXQ8WY36 941 aaPredicted RBP6.51□□□□□ -1.37
RAB5B-207ENST00000549915 RIMBP2O15034 1052 aa6.5□□□□□ -1.37
RAB5B-207ENST00000549915 DOK7Q18PE1 504 aa6.49□□□□□ -1.37
RAB5B-207ENST00000549915 TMC2Q8TDI7 906 aa6.47□□□□□ -1.37
RAB5B-207ENST00000549915 NKX1-1Q15270 411 aaPredicted RBP6.45□□□□□ -1.38
RAB5B-207ENST00000549915 ZSWIM6Q9HCJ5 1215 aa6.45□□□□□ -1.38
RAB5B-207ENST00000549915 ZNF710Q8N1W2 664 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms