RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
UBE2N-204ENST00000549833 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
UBE2N-204ENST00000549833 RTN4Q9NQC3 1192 aaKnown RBP13.75□□□□□ -0.21
UBE2N-204ENST00000549833 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
UBE2N-204ENST00000549833 PKD2Q13563 968 aa13.7□□□□□ -0.22
UBE2N-204ENST00000549833 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
UBE2N-204ENST00000549833 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
UBE2N-204ENST00000549833 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
UBE2N-204ENST00000549833 PYGBP11216 843 aa13.64□□□□□ -0.23
UBE2N-204ENST00000549833 EVX2Q03828 476 aa13.61□□□□□ -0.23
UBE2N-204ENST00000549833 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
UBE2N-204ENST00000549833 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
UBE2N-204ENST00000549833 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
UBE2N-204ENST00000549833 CLCN6P51797 869 aa13.55□□□□□ -0.24
UBE2N-204ENST00000549833 CCDC180Q9P1Z9 1646 aa13.54□□□□□ -0.24
UBE2N-204ENST00000549833 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
UBE2N-204ENST00000549833 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
UBE2N-204ENST00000549833 MAP3K13O43283 966 aa13.52□□□□□ -0.25
UBE2N-204ENST00000549833 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
UBE2N-204ENST00000549833 RGL2O15211 777 aa13.49□□□□□ -0.25
UBE2N-204ENST00000549833 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
UBE2N-204ENST00000549833 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
UBE2N-204ENST00000549833 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
UBE2N-204ENST00000549833 MS4A3Q96HJ5 214 aa13.47□□□□□ -0.25
UBE2N-204ENST00000549833 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
UBE2N-204ENST00000549833 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
UBE2N-204ENST00000549833 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
UBE2N-204ENST00000549833 PCDHB8Q9UN66 801 aa13.43□□□□□ -0.26
UBE2N-204ENST00000549833 GABBR2O75899 941 aa13.42□□□□□ -0.26
UBE2N-204ENST00000549833 VGFO15240 615 aaPredicted RBP13.41□□□□□ -0.26
UBE2N-204ENST00000549833 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
UBE2N-204ENST00000549833 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
UBE2N-204ENST00000549833 PSEN1P49768 467 aa13.33□□□□□ -0.28
UBE2N-204ENST00000549833 TIE1P35590 1138 aa13.32□□□□□ -0.28
UBE2N-204ENST00000549833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
UBE2N-204ENST00000549833 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
UBE2N-204ENST00000549833 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
UBE2N-204ENST00000549833 STK25O00506 426 aa13.28□□□□□ -0.28
UBE2N-204ENST00000549833 TMEM106CQ9BVX2 250 aa13.27□□□□□ -0.29
UBE2N-204ENST00000549833 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
UBE2N-204ENST00000549833 DCBLD2Q96PD2 775 aa13.26□□□□□ -0.29
UBE2N-204ENST00000549833 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
UBE2N-204ENST00000549833 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
UBE2N-204ENST00000549833 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
UBE2N-204ENST00000549833 STK24Q9Y6E0 443 aa13.24□□□□□ -0.29
UBE2N-204ENST00000549833 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
UBE2N-204ENST00000549833 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
UBE2N-204ENST00000549833 ASTLQ6HA08 431 aaPredicted RBP13.2□□□□□ -0.3
UBE2N-204ENST00000549833 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
UBE2N-204ENST00000549833 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
UBE2N-204ENST00000549833 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
UBE2N-204ENST00000549833 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
UBE2N-204ENST00000549833 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
UBE2N-204ENST00000549833 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
UBE2N-204ENST00000549833 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
UBE2N-204ENST00000549833 BBXQ8WY36 941 aaPredicted RBP13.09□□□□□ -0.31
UBE2N-204ENST00000549833 EFCAB3Q8N7B9 438 aa13.08□□□□□ -0.32
UBE2N-204ENST00000549833 ABCC9O60706 1549 aa13.08□□□□□ -0.32
UBE2N-204ENST00000549833 IER5LQ5T953 404 aa13.06□□□□□ -0.32
UBE2N-204ENST00000549833 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
UBE2N-204ENST00000549833 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
UBE2N-204ENST00000549833 SOX12O15370 315 aa13.04□□□□□ -0.32
UBE2N-204ENST00000549833 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
UBE2N-204ENST00000549833 RYDENQ9NUL5 291 aaKnown RBP13.01□□□□□ -0.33
UBE2N-204ENST00000549833 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
UBE2N-204ENST00000549833 C7P10643 843 aa12.99□□□□□ -0.33
UBE2N-204ENST00000549833 NLRP6P59044 892 aa12.99□□□□□ -0.33
UBE2N-204ENST00000549833 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
UBE2N-204ENST00000549833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
UBE2N-204ENST00000549833 MFRPQ9BY79 579 aa12.97□□□□□ -0.33
UBE2N-204ENST00000549833 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
UBE2N-204ENST00000549833 SEC24BO95487 1268 aa12.96□□□□□ -0.33
UBE2N-204ENST00000549833 PLCG2P16885 1265 aa12.96□□□□□ -0.33
UBE2N-204ENST00000549833 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
UBE2N-204ENST00000549833 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
UBE2N-204ENST00000549833 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
UBE2N-204ENST00000549833 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
UBE2N-204ENST00000549833 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
UBE2N-204ENST00000549833 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
UBE2N-204ENST00000549833 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
UBE2N-204ENST00000549833 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
UBE2N-204ENST00000549833 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
UBE2N-204ENST00000549833 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
UBE2N-204ENST00000549833 MS4A4AQ96JQ5 239 aa12.87□□□□□ -0.35
UBE2N-204ENST00000549833 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
UBE2N-204ENST00000549833 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
UBE2N-204ENST00000549833 PLCB2Q00722 1185 aa12.84□□□□□ -0.35
UBE2N-204ENST00000549833 G3V3G9 751 aa12.82□□□□□ -0.36
UBE2N-204ENST00000549833 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
UBE2N-204ENST00000549833 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
UBE2N-204ENST00000549833 PPP1R37O75864 691 aa12.76□□□□□ -0.37
UBE2N-204ENST00000549833 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
UBE2N-204ENST00000549833 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
UBE2N-204ENST00000549833 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
UBE2N-204ENST00000549833 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
UBE2N-204ENST00000549833 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
UBE2N-204ENST00000549833 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
UBE2N-204ENST00000549833 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
UBE2N-204ENST00000549833 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
UBE2N-204ENST00000549833 SCUBE2Q9NQ36 999 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms