RNA–Protein interactions for RNA: ENST00000549140.1

LINC02394-201, Transcript of long intergenic non-protein coding RNA 2394, humanhuman

TSL 4 BASIC

Gene LINC02394, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02394-201ENST00000549140 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
LINC02394-201ENST00000549140 GSE1Q14687 1217 aa14.4□□□□□ -0.1
LINC02394-201ENST00000549140 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
LINC02394-201ENST00000549140 CIZ1Q9ULV3 898 aaPredicted RBP14.37□□□□□ -0.11
LINC02394-201ENST00000549140 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
LINC02394-201ENST00000549140 CLCN6P51797 869 aa14.33□□□□□ -0.12
LINC02394-201ENST00000549140 GABBR2O75899 941 aa14.29□□□□□ -0.12
LINC02394-201ENST00000549140 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
LINC02394-201ENST00000549140 PYGBP11216 843 aa14.25□□□□□ -0.13
LINC02394-201ENST00000549140 MAP3K13O43283 966 aa14.22□□□□□ -0.13
LINC02394-201ENST00000549140 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
LINC02394-201ENST00000549140 GALR2O43603 387 aaPredicted RBP14.19□□□□□ -0.14
LINC02394-201ENST00000549140 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
LINC02394-201ENST00000549140 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
LINC02394-201ENST00000549140 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
LINC02394-201ENST00000549140 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
LINC02394-201ENST00000549140 PKD2Q13563 968 aa14.11□□□□□ -0.15
LINC02394-201ENST00000549140 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
LINC02394-201ENST00000549140 ECM2O94769 699 aaPredicted RBP14.09□□□□□ -0.15
LINC02394-201ENST00000549140 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
LINC02394-201ENST00000549140 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
LINC02394-201ENST00000549140 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
LINC02394-201ENST00000549140 TRPC6Q9Y210 931 aa14.02□□□□□ -0.17
LINC02394-201ENST00000549140 TIE1P35590 1138 aa14□□□□□ -0.17
LINC02394-201ENST00000549140 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
LINC02394-201ENST00000549140 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
LINC02394-201ENST00000549140 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
LINC02394-201ENST00000549140 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
LINC02394-201ENST00000549140 BMP2KQ9NSY1 1161 aaPredicted RBP13.96□□□□□ -0.17
LINC02394-201ENST00000549140 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
LINC02394-201ENST00000549140 PDAP1Q13442 181 aaKnown RBP13.94□□□□□ -0.18
LINC02394-201ENST00000549140 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
LINC02394-201ENST00000549140 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
LINC02394-201ENST00000549140 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
LINC02394-201ENST00000549140 RGL2O15211 777 aa13.93□□□□□ -0.18
LINC02394-201ENST00000549140 PSEN1P49768 467 aa13.93□□□□□ -0.18
LINC02394-201ENST00000549140 TAOK2Q9UL54 1235 aa13.91□□□□□ -0.18
LINC02394-201ENST00000549140 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
LINC02394-201ENST00000549140 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
LINC02394-201ENST00000549140 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
LINC02394-201ENST00000549140 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
LINC02394-201ENST00000549140 PELP1Q8IZL8 1130 aaKnown RBP13.84□□□□□ -0.19
LINC02394-201ENST00000549140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
LINC02394-201ENST00000549140 ZFP91Q96JP5 570 aaPredicted RBP13.82□□□□□ -0.2
LINC02394-201ENST00000549140 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
LINC02394-201ENST00000549140 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
LINC02394-201ENST00000549140 C7P10643 843 aa13.77□□□□□ -0.21
LINC02394-201ENST00000549140 CABP2Q9NPB3 220 aa13.76□□□□□ -0.21
LINC02394-201ENST00000549140 STK25O00506 426 aa13.75□□□□□ -0.21
LINC02394-201ENST00000549140 METRNQ9UJH8 293 aa13.75□□□□□ -0.21
LINC02394-201ENST00000549140 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
LINC02394-201ENST00000549140 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
LINC02394-201ENST00000549140 IER5LQ5T953 404 aa13.73□□□□□ -0.21
LINC02394-201ENST00000549140 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
LINC02394-201ENST00000549140 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
LINC02394-201ENST00000549140 SEC24BO95487 1268 aa13.68□□□□□ -0.22
LINC02394-201ENST00000549140 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
LINC02394-201ENST00000549140 LHX8Q68G74 356 aa13.67□□□□□ -0.22
LINC02394-201ENST00000549140 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
LINC02394-201ENST00000549140 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
LINC02394-201ENST00000549140 PLCG2P16885 1265 aa13.63□□□□□ -0.23
LINC02394-201ENST00000549140 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
LINC02394-201ENST00000549140 OCEL1Q9H607 264 aa13.62□□□□□ -0.23
LINC02394-201ENST00000549140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC02394-201ENST00000549140 COLQQ9Y215 455 aaPredicted RBP13.62□□□□□ -0.23
LINC02394-201ENST00000549140 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
LINC02394-201ENST00000549140 SOX12O15370 315 aa13.59□□□□□ -0.23
LINC02394-201ENST00000549140 ILDR1Q86SU0 546 aaPredicted RBP13.53□□□□□ -0.24
LINC02394-201ENST00000549140 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
LINC02394-201ENST00000549140 POTEB2H3BUK9 544 aa13.52□□□□□ -0.25
LINC02394-201ENST00000549140 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
LINC02394-201ENST00000549140 NLRP6P59044 892 aa13.51□□□□□ -0.25
LINC02394-201ENST00000549140 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
LINC02394-201ENST00000549140 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
LINC02394-201ENST00000549140 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
LINC02394-201ENST00000549140 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
LINC02394-201ENST00000549140 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
LINC02394-201ENST00000549140 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
LINC02394-201ENST00000549140 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
LINC02394-201ENST00000549140 MS4A4AQ96JQ5 239 aa13.43□□□□□ -0.26
LINC02394-201ENST00000549140 G3V3G9 751 aa13.42□□□□□ -0.26
LINC02394-201ENST00000549140 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
LINC02394-201ENST00000549140 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
LINC02394-201ENST00000549140 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
LINC02394-201ENST00000549140 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
LINC02394-201ENST00000549140 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
LINC02394-201ENST00000549140 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
LINC02394-201ENST00000549140 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
LINC02394-201ENST00000549140 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.33□□□□□ -0.28
LINC02394-201ENST00000549140 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
LINC02394-201ENST00000549140 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
LINC02394-201ENST00000549140 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
LINC02394-201ENST00000549140 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
LINC02394-201ENST00000549140 PPP1R37O75864 691 aa13.29□□□□□ -0.28
LINC02394-201ENST00000549140 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
LINC02394-201ENST00000549140 SPRYD3Q8NCJ5 442 aa13.23□□□□□ -0.29
LINC02394-201ENST00000549140 PAXIP1Q6ZW49 1069 aaPredicted RBP13.19□□□□□ -0.3
LINC02394-201ENST00000549140 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
LINC02394-201ENST00000549140 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
LINC02394-201ENST00000549140 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms