RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
SLC38A1-205ENST00000548979 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
SLC38A1-205ENST00000548979 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
SLC38A1-205ENST00000548979 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
SLC38A1-205ENST00000548979 NUBP1P53384 320 aa16.31■□□□□ 0.2
SLC38A1-205ENST00000548979 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
SLC38A1-205ENST00000548979 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
SLC38A1-205ENST00000548979 ZRANB1Q9UGI0 708 aa16.25■□□□□ 0.19
SLC38A1-205ENST00000548979 TSPYL2Q9H2G4 693 aaPredicted RBP16.24■□□□□ 0.19
SLC38A1-205ENST00000548979 SPOCK2Q92563 424 aa16.16■□□□□ 0.18
SLC38A1-205ENST00000548979 PHF12Q96QT6 1004 aa16.15■□□□□ 0.18
SLC38A1-205ENST00000548979 CCDC61Q9Y6R9 512 aa16.13■□□□□ 0.17
SLC38A1-205ENST00000548979 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
SLC38A1-205ENST00000548979 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
SLC38A1-205ENST00000548979 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
SLC38A1-205ENST00000548979 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
SLC38A1-205ENST00000548979 GABBR2O75899 941 aa16.07■□□□□ 0.16
SLC38A1-205ENST00000548979 DCAF8Q5TAQ9 597 aa16.07■□□□□ 0.16
SLC38A1-205ENST00000548979 FAM212AQ96EL1 285 aa16.07■□□□□ 0.16
SLC38A1-205ENST00000548979 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
SLC38A1-205ENST00000548979 GALR2O43603 387 aaPredicted RBP15.98■□□□□ 0.15
SLC38A1-205ENST00000548979 KIF12Q96FN5 646 aa15.98■□□□□ 0.15
SLC38A1-205ENST00000548979 CIZ1Q9ULV3 898 aaPredicted RBP15.98■□□□□ 0.15
SLC38A1-205ENST00000548979 PYGBP11216 843 aa15.95■□□□□ 0.14
SLC38A1-205ENST00000548979 MAP3K13O43283 966 aa15.94■□□□□ 0.14
SLC38A1-205ENST00000548979 GSE1Q14687 1217 aa15.94■□□□□ 0.14
SLC38A1-205ENST00000548979 MS4A3Q96HJ5 214 aa15.92■□□□□ 0.14
SLC38A1-205ENST00000548979 LHX8Q68G74 356 aa15.89■□□□□ 0.13
SLC38A1-205ENST00000548979 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
SLC38A1-205ENST00000548979 CLCN6P51797 869 aa15.82■□□□□ 0.12
SLC38A1-205ENST00000548979 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
SLC38A1-205ENST00000548979 POTEIP0CG38 1075 aa15.81■□□□□ 0.12
SLC38A1-205ENST00000548979 IFNL1Q8IU54 200 aa15.81■□□□□ 0.12
SLC38A1-205ENST00000548979 PKD2Q13563 968 aa15.8■□□□□ 0.12
SLC38A1-205ENST00000548979 CHRM1P11229 460 aaPredicted RBP15.78■□□□□ 0.12
SLC38A1-205ENST00000548979 PCDHB8Q9UN66 801 aa15.78■□□□□ 0.12
SLC38A1-205ENST00000548979 NCAPD3P42695 1498 aa15.75■□□□□ 0.11
SLC38A1-205ENST00000548979 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
SLC38A1-205ENST00000548979 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
SLC38A1-205ENST00000548979 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
SLC38A1-205ENST00000548979 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
SLC38A1-205ENST00000548979 SMARCA4P51532 1647 aa15.69■□□□□ 0.1
SLC38A1-205ENST00000548979 RNF25Q96BH1 459 aaPredicted RBP15.69■□□□□ 0.1
SLC38A1-205ENST00000548979 DCBLD2Q96PD2 775 aa15.69■□□□□ 0.1
SLC38A1-205ENST00000548979 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
SLC38A1-205ENST00000548979 ECM2O94769 699 aaPredicted RBP15.65■□□□□ 0.1
SLC38A1-205ENST00000548979 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
SLC38A1-205ENST00000548979 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
SLC38A1-205ENST00000548979 ATMINO43313 823 aaPredicted RBP15.63■□□□□ 0.09
SLC38A1-205ENST00000548979 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
SLC38A1-205ENST00000548979 ATN1P54259 1190 aaPredicted RBP15.61■□□□□ 0.09
SLC38A1-205ENST00000548979 ASTLQ6HA08 431 aaPredicted RBP15.61■□□□□ 0.09
SLC38A1-205ENST00000548979 ZNF467Q7Z7K2 595 aaPredicted RBP15.61■□□□□ 0.09
SLC38A1-205ENST00000548979 TTLL13PA6NNM8 815 aa15.6■□□□□ 0.09
SLC38A1-205ENST00000548979 RGL2O15211 777 aa15.6■□□□□ 0.09
SLC38A1-205ENST00000548979 TIE1P35590 1138 aa15.59■□□□□ 0.09
SLC38A1-205ENST00000548979 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.08
SLC38A1-205ENST00000548979 TMEM106CQ9BVX2 250 aa15.57■□□□□ 0.08
SLC38A1-205ENST00000548979 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
SLC38A1-205ENST00000548979 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
SLC38A1-205ENST00000548979 RIOK3O14730 519 aaKnown RBP15.53■□□□□ 0.08
SLC38A1-205ENST00000548979 PSEN1P49768 467 aa15.53■□□□□ 0.08
SLC38A1-205ENST00000548979 RTN4Q9NQC3 1192 aaKnown RBP15.51■□□□□ 0.07
SLC38A1-205ENST00000548979 PDAP1Q13442 181 aaKnown RBP15.5■□□□□ 0.07
SLC38A1-205ENST00000548979 TRIM35Q9UPQ4 493 aa15.49■□□□□ 0.07
SLC38A1-205ENST00000548979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.44■□□□□ 0.06
SLC38A1-205ENST00000548979 ZFP91Q96JP5 570 aaPredicted RBP15.44■□□□□ 0.06
SLC38A1-205ENST00000548979 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
SLC38A1-205ENST00000548979 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
SLC38A1-205ENST00000548979 METRNQ9UJH8 293 aa15.39■□□□□ 0.05
SLC38A1-205ENST00000548979 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
SLC38A1-205ENST00000548979 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
SLC38A1-205ENST00000548979 SLC39A7Q92504 469 aa15.36■□□□□ 0.05
SLC38A1-205ENST00000548979 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
SLC38A1-205ENST00000548979 COLQQ9Y215 455 aaPredicted RBP15.35■□□□□ 0.05
SLC38A1-205ENST00000548979 CUX2O14529 1486 aa15.34■□□□□ 0.05
SLC38A1-205ENST00000548979 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
SLC38A1-205ENST00000548979 C7P10643 843 aa15.34■□□□□ 0.05
SLC38A1-205ENST00000548979 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
SLC38A1-205ENST00000548979 WIZO95785 1651 aa15.33■□□□□ 0.04
SLC38A1-205ENST00000548979 POTEB2H3BUK9 544 aa15.33■□□□□ 0.04
SLC38A1-205ENST00000548979 NESP48681 1621 aa15.32■□□□□ 0.04
SLC38A1-205ENST00000548979 BCL11BQ9C0K0 894 aaPredicted RBP15.32■□□□□ 0.04
SLC38A1-205ENST00000548979 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
SLC38A1-205ENST00000548979 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
SLC38A1-205ENST00000548979 STK25O00506 426 aa15.28■□□□□ 0.04
SLC38A1-205ENST00000548979 IRX5P78411 483 aaPredicted RBP15.28■□□□□ 0.04
SLC38A1-205ENST00000548979 EFCAB3Q8N7B9 438 aa15.28■□□□□ 0.04
SLC38A1-205ENST00000548979 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
SLC38A1-205ENST00000548979 IER5LQ5T953 404 aa15.27■□□□□ 0.04
SLC38A1-205ENST00000548979 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
SLC38A1-205ENST00000548979 POTEJP0CG39 1038 aa15.24■□□□□ 0.03
SLC38A1-205ENST00000548979 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
SLC38A1-205ENST00000548979 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
SLC38A1-205ENST00000548979 PLSCR2Q9NRY7 297 aa15.23■□□□□ 0.03
SLC38A1-205ENST00000548979 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
SLC38A1-205ENST00000548979 SEC24BO95487 1268 aa15.22■□□□□ 0.03
SLC38A1-205ENST00000548979 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
SLC38A1-205ENST00000548979 CHGAP10645 457 aaKnown RBP15.21■□□□□ 0.03
SLC38A1-205ENST00000548979 PDCD7Q8N8D1 485 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms