RNA–Protein interactions for RNA: ENST00000548575.1

AC089998.1-201, humanhuman

BASIC

Gene AC089998.1, Length 3,141 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC089998.1-201ENST00000548575 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
AC089998.1-201ENST00000548575 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
AC089998.1-201ENST00000548575 BRD2P25440 801 aaKnown RBP11.07□□□□□ -0.64
AC089998.1-201ENST00000548575 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
AC089998.1-201ENST00000548575 HMGB1P09429 215 aaKnown RBP11.04□□□□□ -0.64
AC089998.1-201ENST00000548575 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
AC089998.1-201ENST00000548575 FAM9AQ8IZU1 332 aaPredicted RBP11.04□□□□□ -0.64
AC089998.1-201ENST00000548575 PDE4CQ08493 712 aa11.02□□□□□ -0.64
AC089998.1-201ENST00000548575 ZNF428Q96B54 188 aa11□□□□□ -0.65
AC089998.1-201ENST00000548575 PUS7Q96PZ0 661 aaKnown RBP10.97□□□□□ -0.65
AC089998.1-201ENST00000548575 ZMYND15Q9H091 742 aa10.97□□□□□ -0.65
AC089998.1-201ENST00000548575 POLR3GLQ9BT43 218 aa10.96□□□□□ -0.66
AC089998.1-201ENST00000548575 ARID3CA6NKF2 412 aa10.95□□□□□ -0.66
AC089998.1-201ENST00000548575 RSPH6AQ9H0K4 717 aa10.95□□□□□ -0.66
AC089998.1-201ENST00000548575 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
AC089998.1-201ENST00000548575 NCAPD3P42695 1498 aa10.92□□□□□ -0.66
AC089998.1-201ENST00000548575 PIAS4Q8N2W9 510 aaPredicted RBP10.91□□□□□ -0.66
AC089998.1-201ENST00000548575 RAD21O60216 631 aa10.9□□□□□ -0.66
AC089998.1-201ENST00000548575 KCTD17Q8N5Z5 321 aa10.9□□□□□ -0.66
AC089998.1-201ENST00000548575 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
AC089998.1-201ENST00000548575 TAF7LQ5H9L4 462 aa10.89□□□□□ -0.67
AC089998.1-201ENST00000548575 ATAD2BQ9ULI0 1458 aa10.85□□□□□ -0.67
AC089998.1-201ENST00000548575 SMARCA2P51531 1590 aa10.84□□□□□ -0.67
AC089998.1-201ENST00000548575 MTMR7Q9Y216 660 aa10.84□□□□□ -0.67
AC089998.1-201ENST00000548575 SMARCA4P51532 1647 aa10.83□□□□□ -0.68
AC089998.1-201ENST00000548575 FOXD4L5Q5VV16 416 aaPredicted RBP10.83□□□□□ -0.68
AC089998.1-201ENST00000548575 FOXD4L4Q8WXT5 416 aaPredicted RBP10.83□□□□□ -0.68
AC089998.1-201ENST00000548575 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
AC089998.1-201ENST00000548575 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
AC089998.1-201ENST00000548575 ECM2O94769 699 aaPredicted RBP10.82□□□□□ -0.68
AC089998.1-201ENST00000548575 RGL2O15211 777 aa10.81□□□□□ -0.68
AC089998.1-201ENST00000548575 BAZ1AQ9NRL2 1556 aaPredicted RBP10.81□□□□□ -0.68
AC089998.1-201ENST00000548575 RGS22Q8NE09 1264 aa10.8□□□□□ -0.68
AC089998.1-201ENST00000548575 APBB1O00213 710 aa10.79□□□□□ -0.68
AC089998.1-201ENST00000548575 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
AC089998.1-201ENST00000548575 ATXN8OSP0DMR3 200 aa10.78□□□□□ -0.68
AC089998.1-201ENST00000548575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
AC089998.1-201ENST00000548575 CUX2O14529 1486 aa10.75□□□□□ -0.69
AC089998.1-201ENST00000548575 NEFLP07196 543 aa10.75□□□□□ -0.69
AC089998.1-201ENST00000548575 BCL11BQ9C0K0 894 aaPredicted RBP10.75□□□□□ -0.69
AC089998.1-201ENST00000548575 BAZ1BQ9UIG0 1483 aaKnown RBP10.73□□□□□ -0.69
AC089998.1-201ENST00000548575 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
AC089998.1-201ENST00000548575 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
AC089998.1-201ENST00000548575 ERCC6Q03468 1493 aa10.71□□□□□ -0.7
AC089998.1-201ENST00000548575 SLC4A2P04920 1241 aa10.71□□□□□ -0.7
AC089998.1-201ENST00000548575 USP35Q9P2H5 1018 aa10.71□□□□□ -0.7
AC089998.1-201ENST00000548575 MAPK8IP2Q13387 824 aaPredicted RBP10.69□□□□□ -0.7
AC089998.1-201ENST00000548575 AEBP1Q8IUX7 1158 aa10.69□□□□□ -0.7
AC089998.1-201ENST00000548575 IRX6P78412 446 aaPredicted RBP10.68□□□□□ -0.7
AC089998.1-201ENST00000548575 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
AC089998.1-201ENST00000548575 ZNF692Q9BU19 519 aaPredicted RBP10.68□□□□□ -0.7
AC089998.1-201ENST00000548575 SLC24A3Q9HC58 644 aa10.65□□□□□ -0.7
AC089998.1-201ENST00000548575 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.7
AC089998.1-201ENST00000548575 FAM177A1Q8N128 213 aaPredicted RBP10.64□□□□□ -0.71
AC089998.1-201ENST00000548575 NESP48681 1621 aa10.63□□□□□ -0.71
AC089998.1-201ENST00000548575 BRPF3Q9ULD4 1205 aa10.63□□□□□ -0.71
AC089998.1-201ENST00000548575 CWC22Q9HCG8 908 aaKnown RBP10.61□□□□□ -0.71
AC089998.1-201ENST00000548575 MFAP1P55081 439 aaKnown RBP10.6□□□□□ -0.71
AC089998.1-201ENST00000548575 CCDC82Q8N4S0 544 aa10.6□□□□□ -0.71
AC089998.1-201ENST00000548575 PKNOX2Q96KN3 472 aa10.6□□□□□ -0.71
AC089998.1-201ENST00000548575 TMCO4Q5TGY1 634 aa10.59□□□□□ -0.71
AC089998.1-201ENST00000548575 PDS5BQ9NTI5 1447 aa10.59□□□□□ -0.71
AC089998.1-201ENST00000548575 ZFP91Q96JP5 570 aaPredicted RBP10.59□□□□□ -0.71
AC089998.1-201ENST00000548575 CCDC136Q96JN2 1154 aa10.58□□□□□ -0.72
AC089998.1-201ENST00000548575 ZNF592Q92610 1267 aa10.57□□□□□ -0.72
AC089998.1-201ENST00000548575 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
AC089998.1-201ENST00000548575 CADPSQ9ULU8 1353 aa10.56□□□□□ -0.72
AC089998.1-201ENST00000548575 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
AC089998.1-201ENST00000548575 ATF5Q9Y2D1 282 aaPredicted RBP10.56□□□□□ -0.72
AC089998.1-201ENST00000548575 PPM1GO15355 546 aaPredicted RBP10.55□□□□□ -0.72
AC089998.1-201ENST00000548575 MYCNP04198 464 aaPredicted RBP10.54□□□□□ -0.72
AC089998.1-201ENST00000548575 GZF1Q9H116 711 aaPredicted RBP10.53□□□□□ -0.72
AC089998.1-201ENST00000548575 WIZO95785 1651 aa10.53□□□□□ -0.72
AC089998.1-201ENST00000548575 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
AC089998.1-201ENST00000548575 E9PSI1 815 aa10.52□□□□□ -0.72
AC089998.1-201ENST00000548575 TMED8Q6PL24 325 aaPredicted RBP10.52□□□□□ -0.73
AC089998.1-201ENST00000548575 CERS3Q8IU89 383 aa10.52□□□□□ -0.73
AC089998.1-201ENST00000548575 A0A0U1RQG5 324 aaPredicted RBP10.51□□□□□ -0.73
AC089998.1-201ENST00000548575 FGD1P98174 961 aa10.51□□□□□ -0.73
AC089998.1-201ENST00000548575 IL27Q8NEV9 243 aa10.51□□□□□ -0.73
AC089998.1-201ENST00000548575 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
AC089998.1-201ENST00000548575 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.51□□□□□ -0.73
AC089998.1-201ENST00000548575 KIF21AQ7Z4S6 1674 aa10.5□□□□□ -0.73
AC089998.1-201ENST00000548575 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
AC089998.1-201ENST00000548575 RSF1Q96T23 1441 aaPredicted RBP10.49□□□□□ -0.73
AC089998.1-201ENST00000548575 MRC2Q9UBG0 1479 aa10.48□□□□□ -0.73
AC089998.1-201ENST00000548575 SPDYE4A6NLX3 237 aa10.47□□□□□ -0.73
AC089998.1-201ENST00000548575 TOP2AP11388 1531 aaKnown RBP10.46□□□□□ -0.74
AC089998.1-201ENST00000548575 WDR62O43379 1518 aa10.46□□□□□ -0.74
AC089998.1-201ENST00000548575 ARID4BQ4LE39 1312 aaPredicted RBP10.46□□□□□ -0.74
AC089998.1-201ENST00000548575 CFTRP13569 1480 aa10.45□□□□□ -0.74
AC089998.1-201ENST00000548575 TICAM2Q86XR7 235 aa10.45□□□□□ -0.74
AC089998.1-201ENST00000548575 TRAIPQ9BWF2 469 aa10.44□□□□□ -0.74
AC089998.1-201ENST00000548575 PSMD1Q99460 953 aa10.44□□□□□ -0.74
AC089998.1-201ENST00000548575 ZNF526Q8TF50 670 aaPredicted RBP10.43□□□□□ -0.74
AC089998.1-201ENST00000548575 CEP164Q9UPV0 1460 aa10.43□□□□□ -0.74
AC089998.1-201ENST00000548575 RSPH4AQ5TD94 716 aa10.42□□□□□ -0.74
AC089998.1-201ENST00000548575 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
AC089998.1-201ENST00000548575 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
AC089998.1-201ENST00000548575 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms