RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
DEPDC4-205ENST00000548313 C7P10643 843 aa12.28□□□□□ -0.44
DEPDC4-205ENST00000548313 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
DEPDC4-205ENST00000548313 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
DEPDC4-205ENST00000548313 METRNQ9UJH8 293 aa12.27□□□□□ -0.45
DEPDC4-205ENST00000548313 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
DEPDC4-205ENST00000548313 MIER1Q8N108 512 aa12.22□□□□□ -0.45
DEPDC4-205ENST00000548313 PLSCR2Q9NRY7 297 aa12.21□□□□□ -0.45
DEPDC4-205ENST00000548313 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
DEPDC4-205ENST00000548313 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
DEPDC4-205ENST00000548313 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
DEPDC4-205ENST00000548313 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
DEPDC4-205ENST00000548313 POTEMA6NI47 508 aa12.13□□□□□ -0.47
DEPDC4-205ENST00000548313 MAP3K13O43283 966 aa12.1□□□□□ -0.47
DEPDC4-205ENST00000548313 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
DEPDC4-205ENST00000548313 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
DEPDC4-205ENST00000548313 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
DEPDC4-205ENST00000548313 TIE1P35590 1138 aa12.09□□□□□ -0.47
DEPDC4-205ENST00000548313 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
DEPDC4-205ENST00000548313 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
DEPDC4-205ENST00000548313 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
DEPDC4-205ENST00000548313 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
DEPDC4-205ENST00000548313 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
DEPDC4-205ENST00000548313 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
DEPDC4-205ENST00000548313 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
DEPDC4-205ENST00000548313 POTEFA5A3E0 1075 aa11.99□□□□□ -0.49
DEPDC4-205ENST00000548313 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
DEPDC4-205ENST00000548313 SEC24BO95487 1268 aa11.98□□□□□ -0.49
DEPDC4-205ENST00000548313 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
DEPDC4-205ENST00000548313 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.49
DEPDC4-205ENST00000548313 NUBP1P53384 320 aa11.95□□□□□ -0.5
DEPDC4-205ENST00000548313 IER5LQ5T953 404 aa11.95□□□□□ -0.5
DEPDC4-205ENST00000548313 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
DEPDC4-205ENST00000548313 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
DEPDC4-205ENST00000548313 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
DEPDC4-205ENST00000548313 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
DEPDC4-205ENST00000548313 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
DEPDC4-205ENST00000548313 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
DEPDC4-205ENST00000548313 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
DEPDC4-205ENST00000548313 PLCG2P16885 1265 aa11.79□□□□□ -0.52
DEPDC4-205ENST00000548313 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
DEPDC4-205ENST00000548313 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
DEPDC4-205ENST00000548313 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
DEPDC4-205ENST00000548313 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
DEPDC4-205ENST00000548313 PYGBP11216 843 aa11.72□□□□□ -0.53
DEPDC4-205ENST00000548313 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
DEPDC4-205ENST00000548313 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
DEPDC4-205ENST00000548313 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
DEPDC4-205ENST00000548313 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
DEPDC4-205ENST00000548313 ST18O60284 1047 aa11.65□□□□□ -0.54
DEPDC4-205ENST00000548313 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
DEPDC4-205ENST00000548313 GSE1Q14687 1217 aa11.64□□□□□ -0.55
DEPDC4-205ENST00000548313 SNPHO15079 494 aa11.62□□□□□ -0.55
DEPDC4-205ENST00000548313 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
DEPDC4-205ENST00000548313 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
DEPDC4-205ENST00000548313 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
DEPDC4-205ENST00000548313 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
DEPDC4-205ENST00000548313 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
DEPDC4-205ENST00000548313 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
DEPDC4-205ENST00000548313 CHRM1P11229 460 aaPredicted RBP11.56□□□□□ -0.56
DEPDC4-205ENST00000548313 MKRN3Q13064 507 aaKnown RBP11.55□□□□□ -0.56
DEPDC4-205ENST00000548313 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
DEPDC4-205ENST00000548313 PDCD7Q8N8D1 485 aaKnown RBP11.51□□□□□ -0.57
DEPDC4-205ENST00000548313 C3orf67Q6ZVT6 689 aa11.5□□□□□ -0.57
DEPDC4-205ENST00000548313 PSEN1P49768 467 aa11.48□□□□□ -0.57
DEPDC4-205ENST00000548313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
DEPDC4-205ENST00000548313 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
DEPDC4-205ENST00000548313 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
DEPDC4-205ENST00000548313 PKD2Q13563 968 aa11.39□□□□□ -0.59
DEPDC4-205ENST00000548313 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
DEPDC4-205ENST00000548313 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
DEPDC4-205ENST00000548313 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
DEPDC4-205ENST00000548313 SPNS2Q8IVW8 549 aa11.38□□□□□ -0.59
DEPDC4-205ENST00000548313 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
DEPDC4-205ENST00000548313 EMP3P54852 163 aa11.36□□□□□ -0.59
DEPDC4-205ENST00000548313 G3V3G9 751 aa11.35□□□□□ -0.59
DEPDC4-205ENST00000548313 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
DEPDC4-205ENST00000548313 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
DEPDC4-205ENST00000548313 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
DEPDC4-205ENST00000548313 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
DEPDC4-205ENST00000548313 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
DEPDC4-205ENST00000548313 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
DEPDC4-205ENST00000548313 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
DEPDC4-205ENST00000548313 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
DEPDC4-205ENST00000548313 KRTAP3-3Q9BYR6 98 aa11.21□□□□□ -0.61
DEPDC4-205ENST00000548313 KRTAP3-2Q9BYR7 98 aa11.21□□□□□ -0.61
DEPDC4-205ENST00000548313 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
DEPDC4-205ENST00000548313 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
DEPDC4-205ENST00000548313 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
DEPDC4-205ENST00000548313 RGL2O15211 777 aa11.17□□□□□ -0.62
DEPDC4-205ENST00000548313 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
DEPDC4-205ENST00000548313 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
DEPDC4-205ENST00000548313 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
DEPDC4-205ENST00000548313 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
DEPDC4-205ENST00000548313 ERBB3P21860 1342 aa11.12□□□□□ -0.63
DEPDC4-205ENST00000548313 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
DEPDC4-205ENST00000548313 DCAF8L2P0C7V8 631 aa11.12□□□□□ -0.63
DEPDC4-205ENST00000548313 RNF25Q96BH1 459 aaPredicted RBP11.1□□□□□ -0.63
DEPDC4-205ENST00000548313 SOX12O15370 315 aa11.09□□□□□ -0.63
DEPDC4-205ENST00000548313 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms