RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 NUBP1P53384 320 aa16.95■□□□□ 0.3
CHPT1-203ENST00000546873 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
CHPT1-203ENST00000546873 DCBLD2Q96PD2 775 aa16.89■□□□□ 0.29
CHPT1-203ENST00000546873 DCAF8Q5TAQ9 597 aa16.86■□□□□ 0.29
CHPT1-203ENST00000546873 GALR2O43603 387 aaPredicted RBP16.84■□□□□ 0.29
CHPT1-203ENST00000546873 IFNLR1Q8IU57 520 aaPredicted RBP16.82■□□□□ 0.28
CHPT1-203ENST00000546873 SPOCK2Q92563 424 aa16.81■□□□□ 0.28
CHPT1-203ENST00000546873 KIF12Q96FN5 646 aa16.79■□□□□ 0.28
CHPT1-203ENST00000546873 GSE1Q14687 1217 aa16.78■□□□□ 0.28
CHPT1-203ENST00000546873 MS4A3Q96HJ5 214 aa16.78■□□□□ 0.28
CHPT1-203ENST00000546873 MAP3K13O43283 966 aa16.73■□□□□ 0.27
CHPT1-203ENST00000546873 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
CHPT1-203ENST00000546873 PCDHB13Q9Y5F0 798 aa16.69■□□□□ 0.26
CHPT1-203ENST00000546873 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
CHPT1-203ENST00000546873 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
CHPT1-203ENST00000546873 PYGBP11216 843 aa16.63■□□□□ 0.25
CHPT1-203ENST00000546873 TIE1P35590 1138 aa16.55■□□□□ 0.24
CHPT1-203ENST00000546873 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
CHPT1-203ENST00000546873 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
CHPT1-203ENST00000546873 ATMINO43313 823 aaPredicted RBP16.53■□□□□ 0.24
CHPT1-203ENST00000546873 CHRM1P11229 460 aaPredicted RBP16.52■□□□□ 0.24
CHPT1-203ENST00000546873 ZNF467Q7Z7K2 595 aaPredicted RBP16.49■□□□□ 0.23
CHPT1-203ENST00000546873 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
CHPT1-203ENST00000546873 BMP2KQ9NSY1 1161 aaPredicted RBP16.49■□□□□ 0.23
CHPT1-203ENST00000546873 TRPC6Q9Y210 931 aa16.49■□□□□ 0.23
CHPT1-203ENST00000546873 SLC39A7Q92504 469 aa16.46■□□□□ 0.23
CHPT1-203ENST00000546873 ATN1P54259 1190 aaPredicted RBP16.44■□□□□ 0.22
CHPT1-203ENST00000546873 PCDHB8Q9UN66 801 aa16.44■□□□□ 0.22
CHPT1-203ENST00000546873 LHX8Q68G74 356 aa16.43■□□□□ 0.22
CHPT1-203ENST00000546873 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
CHPT1-203ENST00000546873 TTLL13PA6NNM8 815 aa16.42■□□□□ 0.22
CHPT1-203ENST00000546873 C7P10643 843 aa16.42■□□□□ 0.22
CHPT1-203ENST00000546873 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
CHPT1-203ENST00000546873 METRNQ9UJH8 293 aa16.39■□□□□ 0.21
CHPT1-203ENST00000546873 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
CHPT1-203ENST00000546873 PDAP1Q13442 181 aaKnown RBP16.29■□□□□ 0.2
CHPT1-203ENST00000546873 SEC24BO95487 1268 aa16.28■□□□□ 0.2
CHPT1-203ENST00000546873 PSEN1P49768 467 aa16.28■□□□□ 0.2
CHPT1-203ENST00000546873 IER5LQ5T953 404 aa16.28■□□□□ 0.2
CHPT1-203ENST00000546873 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
CHPT1-203ENST00000546873 RIOK3O14730 519 aaKnown RBP16.18■□□□□ 0.18
CHPT1-203ENST00000546873 ECM2O94769 699 aaPredicted RBP16.18■□□□□ 0.18
CHPT1-203ENST00000546873 MKRN3Q13064 507 aaKnown RBP16.17■□□□□ 0.18
CHPT1-203ENST00000546873 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
CHPT1-203ENST00000546873 PLCG2P16885 1265 aa16.16■□□□□ 0.18
CHPT1-203ENST00000546873 MAMSTRQ6ZN01 415 aa16.13■□□□□ 0.17
CHPT1-203ENST00000546873 POTEB2H3BUK9 544 aa16.12■□□□□ 0.17
CHPT1-203ENST00000546873 COLQQ9Y215 455 aaPredicted RBP16.12■□□□□ 0.17
CHPT1-203ENST00000546873 VGFO15240 615 aaPredicted RBP16.11■□□□□ 0.17
CHPT1-203ENST00000546873 OCEL1Q9H607 264 aa16.09■□□□□ 0.17
CHPT1-203ENST00000546873 POTEFA5A3E0 1075 aa16.08■□□□□ 0.16
CHPT1-203ENST00000546873 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
CHPT1-203ENST00000546873 PKD2Q13563 968 aa16.07■□□□□ 0.16
CHPT1-203ENST00000546873 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
CHPT1-203ENST00000546873 SCUBE2Q9NQ36 999 aa16.07■□□□□ 0.16
CHPT1-203ENST00000546873 IRX5P78411 483 aaPredicted RBP16.06■□□□□ 0.16
CHPT1-203ENST00000546873 OTUD5Q96G74 571 aa16.02■□□□□ 0.16
CHPT1-203ENST00000546873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.161e-13■□□□□ 10.4
CHPT1-203ENST00000546873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
CHPT1-203ENST00000546873 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
CHPT1-203ENST00000546873 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
CHPT1-203ENST00000546873 RGL2O15211 777 aa15.94■□□□□ 0.14
CHPT1-203ENST00000546873 EFCAB3Q8N7B9 438 aa15.91■□□□□ 0.14
CHPT1-203ENST00000546873 L3MBTL3Q96JM7 780 aaPredicted RBP15.91■□□□□ 0.14
CHPT1-203ENST00000546873 STK25O00506 426 aa15.9■□□□□ 0.14
CHPT1-203ENST00000546873 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
CHPT1-203ENST00000546873 PDCD7Q8N8D1 485 aaKnown RBP15.89■□□□□ 0.13
CHPT1-203ENST00000546873 STK24Q9Y6E0 443 aa15.89■□□□□ 0.13
CHPT1-203ENST00000546873 G3V3G9 751 aa15.88■□□□□ 0.13
CHPT1-203ENST00000546873 SOX12O15370 315 aa15.86■□□□□ 0.13
CHPT1-203ENST00000546873 ILDR1Q86SU0 546 aaPredicted RBP15.82■□□□□ 0.12
CHPT1-203ENST00000546873 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.82■□□□□ 0.12
CHPT1-203ENST00000546873 C3orf67Q6ZVT6 689 aa15.81■□□□□ 0.12
CHPT1-203ENST00000546873 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
CHPT1-203ENST00000546873 NLRP6P59044 892 aa15.75■□□□□ 0.11
CHPT1-203ENST00000546873 DPY19L2Q6NUT2 758 aa15.75■□□□□ 0.11
CHPT1-203ENST00000546873 BOLA1Q9Y3E2 137 aa15.74■□□□□ 0.11
CHPT1-203ENST00000546873 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
CHPT1-203ENST00000546873 CHGAP10645 457 aaKnown RBP15.67■□□□□ 0.1
CHPT1-203ENST00000546873 HS6ST3Q8IZP7 471 aa15.66■□□□□ 0.1
CHPT1-203ENST00000546873 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
CHPT1-203ENST00000546873 FAM163AQ96GL9 167 aaPredicted RBP15.62■□□□□ 0.09
CHPT1-203ENST00000546873 SNPHO15079 494 aa15.61■□□□□ 0.09
CHPT1-203ENST00000546873 MS4A4AQ96JQ5 239 aa15.61■□□□□ 0.09
CHPT1-203ENST00000546873 MFRPQ9BY79 579 aa15.61■□□□□ 0.09
CHPT1-203ENST00000546873 FBXO22Q8NEZ5 403 aa15.6■□□□□ 0.09
CHPT1-203ENST00000546873 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.08
CHPT1-203ENST00000546873 MICALL2Q8IY33 904 aa15.58■□□□□ 0.08
CHPT1-203ENST00000546873 TMEM121BQ9BXQ6 578 aaPredicted RBP15.57■□□□□ 0.08
CHPT1-203ENST00000546873 NISCHQ9Y2I1 1504 aa15.55■□□□□ 0.08
CHPT1-203ENST00000546873 RYDENQ9NUL5 291 aaKnown RBP15.49■□□□□ 0.07
CHPT1-203ENST00000546873 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
CHPT1-203ENST00000546873 POTEMA6NI47 508 aa15.42■□□□□ 0.06
CHPT1-203ENST00000546873 POTEGQ6S5H5 508 aa15.41■□□□□ 0.06
CHPT1-203ENST00000546873 ST18O60284 1047 aa15.39■□□□□ 0.05
CHPT1-203ENST00000546873 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
CHPT1-203ENST00000546873 LCE2DQ5TA82 110 aaPredicted RBP15.36■□□□□ 0.05
CHPT1-203ENST00000546873 NKX1-1Q15270 411 aaPredicted RBP15.35■□□□□ 0.05
CHPT1-203ENST00000546873 DOK7Q18PE1 504 aa15.35■□□□□ 0.05
CHPT1-203ENST00000546873 PPP1R37O75864 691 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms