RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
SNHG1-224ENST00000545688 CCDC61Q9Y6R9 512 aa15.39■□□□□ 0.05
SNHG1-224ENST00000545688 GALR2O43603 387 aaPredicted RBP15.33■□□□□ 0.04
SNHG1-224ENST00000545688 FAM212AQ96EL1 285 aa15.33■□□□□ 0.04
SNHG1-224ENST00000545688 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
SNHG1-224ENST00000545688 KIF12Q96FN5 646 aa15.26■□□□□ 0.03
SNHG1-224ENST00000545688 MS4A3Q96HJ5 214 aa15.26■□□□□ 0.03
SNHG1-224ENST00000545688 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
SNHG1-224ENST00000545688 POTEIP0CG38 1075 aa15.22■□□□□ 0.03
SNHG1-224ENST00000545688 MAP3K13O43283 966 aa15.2■□□□□ 0.02
SNHG1-224ENST00000545688 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
SNHG1-224ENST00000545688 GSE1Q14687 1217 aa15.16■□□□□ 0.02
SNHG1-224ENST00000545688 PYGBP11216 843 aa15.13■□□□□ 0.01
SNHG1-224ENST00000545688 PCDHB13Q9Y5F0 798 aa15.12■□□□□ 0.01
SNHG1-224ENST00000545688 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
SNHG1-224ENST00000545688 CIZ1Q9ULV3 898 aaPredicted RBP15.09■□□□□ 0.01
SNHG1-224ENST00000545688 TRPC6Q9Y210 931 aa15.09■□□□□ 0.01
SNHG1-224ENST00000545688 IFNL1Q8IU54 200 aa15.06■□□□□ 0
SNHG1-224ENST00000545688 ASTLQ6HA08 431 aaPredicted RBP15.02■□□□□ -0
SNHG1-224ENST00000545688 ATMINO43313 823 aaPredicted RBP15.01□□□□□ -0.01
SNHG1-224ENST00000545688 BMP2KQ9NSY1 1161 aaPredicted RBP15□□□□□ -0.01
SNHG1-224ENST00000545688 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
SNHG1-224ENST00000545688 CHRM1P11229 460 aaPredicted RBP14.98□□□□□ -0.01
SNHG1-224ENST00000545688 TIE1P35590 1138 aa14.98□□□□□ -0.01
SNHG1-224ENST00000545688 PCDHB8Q9UN66 801 aa14.97□□□□□ -0.01
SNHG1-224ENST00000545688 ATN1P54259 1190 aaPredicted RBP14.96□□□□□ -0.01
SNHG1-224ENST00000545688 TTLL13PA6NNM8 815 aa14.93□□□□□ -0.02
SNHG1-224ENST00000545688 ZNF467Q7Z7K2 595 aaPredicted RBP14.9□□□□□ -0.02
SNHG1-224ENST00000545688 TMEM106CQ9BVX2 250 aa14.88□□□□□ -0.03
SNHG1-224ENST00000545688 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
SNHG1-224ENST00000545688 SLC39A7Q92504 469 aa14.85□□□□□ -0.03
SNHG1-224ENST00000545688 LHX8Q68G74 356 aa14.84□□□□□ -0.03
SNHG1-224ENST00000545688 METRNQ9UJH8 293 aa14.84□□□□□ -0.03
SNHG1-224ENST00000545688 TRIM35Q9UPQ4 493 aa14.83□□□□□ -0.04
SNHG1-224ENST00000545688 C7P10643 843 aa14.81□□□□□ -0.04
SNHG1-224ENST00000545688 PSEN1P49768 467 aa14.77□□□□□ -0.05
SNHG1-224ENST00000545688 PDAP1Q13442 181 aaKnown RBP14.74□□□□□ -0.05
SNHG1-224ENST00000545688 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
SNHG1-224ENST00000545688 POTEB2H3BUK9 544 aa14.73□□□□□ -0.05
SNHG1-224ENST00000545688 PKD2Q13563 968 aa14.73□□□□□ -0.05
SNHG1-224ENST00000545688 POTEFA5A3E0 1075 aa14.71□□□□□ -0.05
SNHG1-224ENST00000545688 IER5LQ5T953 404 aa14.71□□□□□ -0.05
SNHG1-224ENST00000545688 ECM2O94769 699 aaPredicted RBP14.7□□□□□ -0.06
SNHG1-224ENST00000545688 RIOK3O14730 519 aaKnown RBP14.68□□□□□ -0.06
SNHG1-224ENST00000545688 COLQQ9Y215 455 aaPredicted RBP14.68□□□□□ -0.06
SNHG1-224ENST00000545688 SEC24BO95487 1268 aa14.66□□□□□ -0.06
SNHG1-224ENST00000545688 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
SNHG1-224ENST00000545688 POTEJP0CG39 1038 aa14.61□□□□□ -0.07
SNHG1-224ENST00000545688 IRX5P78411 483 aaPredicted RBP14.61□□□□□ -0.07
SNHG1-224ENST00000545688 VGFO15240 615 aaPredicted RBP14.6□□□□□ -0.07
SNHG1-224ENST00000545688 CABP2Q9NPB3 220 aa14.6□□□□□ -0.07
SNHG1-224ENST00000545688 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.58□□□□□ -0.08
SNHG1-224ENST00000545688 RGL2O15211 777 aa14.58□□□□□ -0.08
SNHG1-224ENST00000545688 PLCG2P16885 1265 aa14.58□□□□□ -0.08
SNHG1-224ENST00000545688 MKRN3Q13064 507 aaKnown RBP14.58□□□□□ -0.08
SNHG1-224ENST00000545688 ZFP91Q96JP5 570 aaPredicted RBP14.58□□□□□ -0.08
SNHG1-224ENST00000545688 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
SNHG1-224ENST00000545688 OCEL1Q9H607 264 aa14.54□□□□□ -0.08
SNHG1-224ENST00000545688 PDCD7Q8N8D1 485 aaKnown RBP14.49□□□□□ -0.09
SNHG1-224ENST00000545688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNHG1-224ENST00000545688 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
SNHG1-224ENST00000545688 EFCAB3Q8N7B9 438 aa14.48□□□□□ -0.09
SNHG1-224ENST00000545688 MAMSTRQ6ZN01 415 aa14.47□□□□□ -0.09
SNHG1-224ENST00000545688 BCL11BQ9C0K0 894 aaPredicted RBP14.46□□□□□ -0.09
SNHG1-224ENST00000545688 SCUBE2Q9NQ36 999 aa14.45□□□□□ -0.1
SNHG1-224ENST00000545688 ILDR1Q86SU0 546 aaPredicted RBP14.44□□□□□ -0.1
SNHG1-224ENST00000545688 STK25O00506 426 aa14.42□□□□□ -0.1
SNHG1-224ENST00000545688 STK24Q9Y6E0 443 aa14.42□□□□□ -0.1
SNHG1-224ENST00000545688 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
SNHG1-224ENST00000545688 SOX12O15370 315 aa14.34□□□□□ -0.11
SNHG1-224ENST00000545688 L3MBTL3Q96JM7 780 aaPredicted RBP14.33□□□□□ -0.12
SNHG1-224ENST00000545688 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
SNHG1-224ENST00000545688 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
SNHG1-224ENST00000545688 HS6ST3Q8IZP7 471 aa14.26□□□□□ -0.13
SNHG1-224ENST00000545688 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
SNHG1-224ENST00000545688 MFRPQ9BY79 579 aa14.26□□□□□ -0.13
SNHG1-224ENST00000545688 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.25□□□□□ -0.13
SNHG1-224ENST00000545688 BOLA1Q9Y3E2 137 aa14.25□□□□□ -0.13
SNHG1-224ENST00000545688 CHGAP10645 457 aaKnown RBP14.24□□□□□ -0.13
SNHG1-224ENST00000545688 NLRP6P59044 892 aa14.24□□□□□ -0.13
SNHG1-224ENST00000545688 C3orf67Q6ZVT6 689 aa14.24□□□□□ -0.13
SNHG1-224ENST00000545688 FBXO22Q8NEZ5 403 aa14.24□□□□□ -0.13
SNHG1-224ENST00000545688 G3V3G9 751 aa14.22□□□□□ -0.13
SNHG1-224ENST00000545688 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
SNHG1-224ENST00000545688 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
SNHG1-224ENST00000545688 TMEM121BQ9BXQ6 578 aaPredicted RBP14.17□□□□□ -0.14
SNHG1-224ENST00000545688 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
SNHG1-224ENST00000545688 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
SNHG1-224ENST00000545688 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
SNHG1-224ENST00000545688 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
SNHG1-224ENST00000545688 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
SNHG1-224ENST00000545688 LCE2DQ5TA82 110 aaPredicted RBP14.07□□□□□ -0.16
SNHG1-224ENST00000545688 PPP1R37O75864 691 aa14.04□□□□□ -0.16
SNHG1-224ENST00000545688 TMEM92Q6UXU6 159 aa14.04□□□□□ -0.16
SNHG1-224ENST00000545688 SNPHO15079 494 aa13.99□□□□□ -0.17
SNHG1-224ENST00000545688 ST18O60284 1047 aa13.97□□□□□ -0.17
SNHG1-224ENST00000545688 POTEMA6NI47 508 aa13.95□□□□□ -0.18
SNHG1-224ENST00000545688 POTEGQ6S5H5 508 aa13.93□□□□□ -0.18
SNHG1-224ENST00000545688 RYDENQ9NUL5 291 aaKnown RBP13.92□□□□□ -0.18
SNHG1-224ENST00000545688 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms