RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NPM1P06748 294 aaKnown RBP eCLIP2.57□□□□□ -2
HIF1A-204ENST00000539097 IFFO2Q5TF58 517 aa2.57□□□□□ -2
HIF1A-204ENST00000539097 PRKCSHP14314 528 aaPredicted RBP2.56□□□□□ -2
HIF1A-204ENST00000539097 PITPNM1O00562 1244 aa2.55□□□□□ -2
HIF1A-204ENST00000539097 VASPP50552 380 aaPredicted RBP2.55□□□□□ -2
HIF1A-204ENST00000539097 DAXXQ9UER7 740 aaPredicted RBP2.55□□□□□ -2
HIF1A-204ENST00000539097 RYDENQ9NUL5 291 aaKnown RBP2.54□□□□□ -2
HIF1A-204ENST00000539097 KDM2AQ9Y2K7 1162 aa2.54□□□□□ -2
HIF1A-204ENST00000539097 CAPN15O75808 1086 aa2.54□□□□□ -2
HIF1A-204ENST00000539097 SPNS2Q8IVW8 549 aa2.54□□□□□ -2
HIF1A-204ENST00000539097 OSCARQ8IYS5 282 aa2.54□□□□□ -2
HIF1A-204ENST00000539097 VSIG10Q8N0Z9 540 aa2.54□□□□□ -2
HIF1A-204ENST00000539097 BBXQ8WY36 941 aaPredicted RBP2.52□□□□□ -2.01
HIF1A-204ENST00000539097 POTEFA5A3E0 1075 aa2.51□□□□□ -2.01
HIF1A-204ENST00000539097 RGL2O15211 777 aa2.51□□□□□ -2.01
HIF1A-204ENST00000539097 PLCB2Q00722 1185 aa2.51□□□□□ -2.01
HIF1A-204ENST00000539097 CDAN1Q8IWY9 1227 aa2.51□□□□□ -2.01
HIF1A-204ENST00000539097 RNF25Q96BH1 459 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-204ENST00000539097 GSE1Q14687 1217 aa2.51□□□□□ -2.01
HIF1A-204ENST00000539097 SPOCK2Q92563 424 aa2.5□□□□□ -2.01
HIF1A-204ENST00000539097 TMEM121BQ9BXQ6 578 aaPredicted RBP2.5□□□□□ -2.01
HIF1A-204ENST00000539097 PLEKHG5O94827 1062 aa2.49□□□□□ -2.01
HIF1A-204ENST00000539097 C7P10643 843 aa2.48□□□□□ -2.01
HIF1A-204ENST00000539097 PTGER2P43116 358 aa2.47□□□□□ -2.01
HIF1A-204ENST00000539097 LOC100996750A0A140TA64 210 aa2.47□□□□□ -2.01
HIF1A-204ENST00000539097 NKX1-1Q15270 411 aaPredicted RBP2.47□□□□□ -2.01
HIF1A-204ENST00000539097 SLC39A7Q92504 469 aa2.47□□□□□ -2.01
HIF1A-204ENST00000539097 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
HIF1A-204ENST00000539097 MNX1P50219 401 aaPredicted RBP2.46□□□□□ -2.02
HIF1A-204ENST00000539097 TSHZ2Q9NRE2 1034 aa2.46□□□□□ -2.02
HIF1A-204ENST00000539097 PABPN1Q86U42 306 aaKnown RBP eCLIP2.46□□□□□ -2.02
HIF1A-204ENST00000539097 ARIH1Q9Y4X5 557 aaPredicted RBP2.45□□□□□ -2.02
HIF1A-204ENST00000539097 DCAF8L2P0C7V8 631 aa2.45□□□□□ -2.02
HIF1A-204ENST00000539097 HAP1P54257 671 aaPredicted RBP2.45□□□□□ -2.02
HIF1A-204ENST00000539097 ZNF692Q9BU19 519 aaPredicted RBP2.44□□□□□ -2.02
HIF1A-204ENST00000539097 HS6ST3Q8IZP7 471 aa2.43□□□□□ -2.02
HIF1A-204ENST00000539097 SPDYE1Q8NFV5 336 aaPredicted RBP2.43□□□□□ -2.02
HIF1A-204ENST00000539097 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.42□□□□□ -2.02
HIF1A-204ENST00000539097 PAXIP1Q6ZW49 1069 aaPredicted RBP2.42□□□□□ -2.02
HIF1A-204ENST00000539097 ECM2O94769 699 aaPredicted RBP2.42□□□□□ -2.02
HIF1A-204ENST00000539097 CFAP44Q96MT7 982 aa2.41□□□□□ -2.02
HIF1A-204ENST00000539097 BCANQ96GW7 911 aa2.41□□□□□ -2.02
HIF1A-204ENST00000539097 NUBP1P53384 320 aa2.4□□□□□ -2.03
HIF1A-204ENST00000539097 RASEFQ8IZ41 740 aa2.4□□□□□ -2.03
HIF1A-204ENST00000539097 KRTAP17-1Q9BYP8 105 aa2.4□□□□□ -2.03
HIF1A-204ENST00000539097 CHGAP10645 457 aaKnown RBP2.4□□□□□ -2.03
HIF1A-204ENST00000539097 VGFO15240 615 aaPredicted RBP2.39□□□□□ -2.03
HIF1A-204ENST00000539097 MIER1Q8N108 512 aa2.39□□□□□ -2.03
HIF1A-204ENST00000539097 TPRNQ4KMQ1 711 aa2.39□□□□□ -2.03
HIF1A-204ENST00000539097 KLHL34Q8N239 644 aa2.39□□□□□ -2.03
HIF1A-204ENST00000539097 CADPS2Q86UW7 1296 aa2.38□□□□□ -2.03
HIF1A-204ENST00000539097 PELP1Q8IZL8 1130 aaKnown RBP2.38□□□□□ -2.03
HIF1A-204ENST00000539097 PLCD3Q8N3E9 789 aa2.38□□□□□ -2.03
HIF1A-204ENST00000539097 PRKAR2AP13861 404 aaKnown RBP2.38□□□□□ -2.03
HIF1A-204ENST00000539097 CREBZFQ9NS37 354 aa2.38□□□□□ -2.03
HIF1A-204ENST00000539097 GTPBP6O43824 516 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-204ENST00000539097 CIZ1Q9ULV3 898 aaPredicted RBP2.37□□□□□ -2.03
HIF1A-204ENST00000539097 CHADLQ6NUI6 762 aa2.37□□□□□ -2.03
HIF1A-204ENST00000539097 SOX12O15370 315 aa2.37□□□□□ -2.03
HIF1A-204ENST00000539097 IER5LQ5T953 404 aa2.36□□□□□ -2.03
HIF1A-204ENST00000539097 ZNF467Q7Z7K2 595 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-204ENST00000539097 ATMINO43313 823 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-204ENST00000539097 PYGBP11216 843 aa2.36□□□□□ -2.03
HIF1A-204ENST00000539097 P3H3Q8IVL6 736 aa2.36□□□□□ -2.03
HIF1A-204ENST00000539097 SCUBE2Q9NQ36 999 aa2.36□□□□□ -2.03
HIF1A-204ENST00000539097 RIOK3O14730 519 aaKnown RBP2.35□□□□□ -2.03
HIF1A-204ENST00000539097 SPRYD3Q8NCJ5 442 aa2.34□□□□□ -2.03
HIF1A-204ENST00000539097 DCBLD2Q96PD2 775 aa2.34□□□□□ -2.03
HIF1A-204ENST00000539097 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.34□□□□□ -2.04
HIF1A-204ENST00000539097 PPP1R37O75864 691 aa2.34□□□□□ -2.04
HIF1A-204ENST00000539097 ZFP91Q96JP5 570 aaPredicted RBP2.34□□□□□ -2.04
HIF1A-204ENST00000539097 KRTAP3-3Q9BYR6 98 aa2.34□□□□□ -2.04
HIF1A-204ENST00000539097 KRTAP3-2Q9BYR7 98 aa2.34□□□□□ -2.04
HIF1A-204ENST00000539097 SOCS7O14512 581 aa2.34□□□□□ -2.04
HIF1A-204ENST00000539097 FAM212AQ96EL1 285 aa2.34□□□□□ -2.04
HIF1A-204ENST00000539097 CLEC11AQ9Y240 323 aa2.34□□□□□ -2.04
HIF1A-204ENST00000539097 LCE2AQ5TA79 106 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-204ENST00000539097 BCL11BQ9C0K0 894 aaPredicted RBP2.33□□□□□ -2.04
HIF1A-204ENST00000539097 TIMELESSQ9UNS1 1208 aa2.33□□□□□ -2.04
HIF1A-204ENST00000539097 SNPHO15079 494 aa2.33□□□□□ -2.04
HIF1A-204ENST00000539097 TRPC6Q9Y210 931 aa2.33□□□□□ -2.04
HIF1A-204ENST00000539097 STK25O00506 426 aa2.32□□□□□ -2.04
HIF1A-204ENST00000539097 PCDHB8Q9UN66 801 aa2.32□□□□□ -2.04
HIF1A-204ENST00000539097 PCDHB13Q9Y5F0 798 aa2.32□□□□□ -2.04
HIF1A-204ENST00000539097 MFSD10Q14728 455 aa2.32□□□□□ -2.04
HIF1A-204ENST00000539097 KCNV2Q8TDN2 545 aa2.32□□□□□ -2.04
HIF1A-204ENST00000539097 MFRPQ9BY79 579 aa2.31□□□□□ -2.04
HIF1A-204ENST00000539097 SPDYE16A6NNV3 312 aaPredicted RBP2.3□□□□□ -2.04
HIF1A-204ENST00000539097 SMYD5Q6GMV2 418 aa2.3□□□□□ -2.04
HIF1A-204ENST00000539097 ARHGEF1Q92888 912 aaKnown RBP2.3□□□□□ -2.04
HIF1A-204ENST00000539097 CCDC61Q9Y6R9 512 aa2.3□□□□□ -2.04
HIF1A-204ENST00000539097 PDAP1Q13442 181 aaKnown RBP2.29□□□□□ -2.04
HIF1A-204ENST00000539097 TSPYL2Q9H2G4 693 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-204ENST00000539097 DCAF8Q5TAQ9 597 aa2.29□□□□□ -2.04
HIF1A-204ENST00000539097 MS4A4AQ96JQ5 239 aa2.29□□□□□ -2.04
HIF1A-204ENST00000539097 STK24Q9Y6E0 443 aa2.29□□□□□ -2.04
HIF1A-204ENST00000539097 TMEM132AQ24JP5 1023 aa2.29□□□□□ -2.04
HIF1A-204ENST00000539097 IFNL1Q8IU54 200 aa2.29□□□□□ -2.04
HIF1A-204ENST00000539097 NCKAP5LQ9HCH0 1330 aa2.28□□□□□ -2.04
HIF1A-204ENST00000539097 POTEB3A0JP26 581 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms