RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
GCSHP4-201ENST00000538792 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
GCSHP4-201ENST00000538792 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
GCSHP4-201ENST00000538792 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
GCSHP4-201ENST00000538792 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
GCSHP4-201ENST00000538792 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
GCSHP4-201ENST00000538792 CLCN6P51797 869 aa13.4□□□□□ -0.26
GCSHP4-201ENST00000538792 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
GCSHP4-201ENST00000538792 MAP3K13O43283 966 aa13.36□□□□□ -0.27
GCSHP4-201ENST00000538792 PYGBP11216 843 aa13.33□□□□□ -0.28
GCSHP4-201ENST00000538792 GSE1Q14687 1217 aa13.33□□□□□ -0.28
GCSHP4-201ENST00000538792 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
GCSHP4-201ENST00000538792 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
GCSHP4-201ENST00000538792 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
GCSHP4-201ENST00000538792 PCDHB13Q9Y5F0 798 aa13.26□□□□□ -0.29
GCSHP4-201ENST00000538792 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
GCSHP4-201ENST00000538792 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
GCSHP4-201ENST00000538792 SGIP1Q9BQI5 828 aa13.23□□□□□ -0.29
GCSHP4-201ENST00000538792 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
GCSHP4-201ENST00000538792 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
GCSHP4-201ENST00000538792 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
GCSHP4-201ENST00000538792 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
GCSHP4-201ENST00000538792 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
GCSHP4-201ENST00000538792 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
GCSHP4-201ENST00000538792 TIE1P35590 1138 aa13.12□□□□□ -0.31
GCSHP4-201ENST00000538792 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
GCSHP4-201ENST00000538792 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
GCSHP4-201ENST00000538792 PKD2Q13563 968 aa13.1□□□□□ -0.31
GCSHP4-201ENST00000538792 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
GCSHP4-201ENST00000538792 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
GCSHP4-201ENST00000538792 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
GCSHP4-201ENST00000538792 TMEM106CQ9BVX2 250 aa13.06□□□□□ -0.32
GCSHP4-201ENST00000538792 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
GCSHP4-201ENST00000538792 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
GCSHP4-201ENST00000538792 PSEN1P49768 467 aa12.99□□□□□ -0.33
GCSHP4-201ENST00000538792 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
GCSHP4-201ENST00000538792 METRNQ9UJH8 293 aa12.97□□□□□ -0.33
GCSHP4-201ENST00000538792 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.33
GCSHP4-201ENST00000538792 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
GCSHP4-201ENST00000538792 RGL2O15211 777 aa12.94□□□□□ -0.34
GCSHP4-201ENST00000538792 C7P10643 843 aa12.94□□□□□ -0.34
GCSHP4-201ENST00000538792 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
GCSHP4-201ENST00000538792 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
GCSHP4-201ENST00000538792 LHX8Q68G74 356 aa12.9□□□□□ -0.34
GCSHP4-201ENST00000538792 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
GCSHP4-201ENST00000538792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
GCSHP4-201ENST00000538792 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
GCSHP4-201ENST00000538792 IER5LQ5T953 404 aa12.87□□□□□ -0.35
GCSHP4-201ENST00000538792 ZFP91Q96JP5 570 aaPredicted RBP12.87□□□□□ -0.35
GCSHP4-201ENST00000538792 CABP2Q9NPB3 220 aa12.84□□□□□ -0.35
GCSHP4-201ENST00000538792 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
GCSHP4-201ENST00000538792 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
GCSHP4-201ENST00000538792 SEC24BO95487 1268 aa12.8□□□□□ -0.36
GCSHP4-201ENST00000538792 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
GCSHP4-201ENST00000538792 MKRN3Q13064 507 aaKnown RBP12.79□□□□□ -0.36
GCSHP4-201ENST00000538792 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
GCSHP4-201ENST00000538792 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
GCSHP4-201ENST00000538792 PLCG2P16885 1265 aa12.75□□□□□ -0.37
GCSHP4-201ENST00000538792 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
GCSHP4-201ENST00000538792 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
GCSHP4-201ENST00000538792 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
GCSHP4-201ENST00000538792 STK25O00506 426 aa12.73□□□□□ -0.37
GCSHP4-201ENST00000538792 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
GCSHP4-201ENST00000538792 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
GCSHP4-201ENST00000538792 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
GCSHP4-201ENST00000538792 RTN4Q9NQC3 1192 aaKnown RBP12.72□□□□□ -0.37
GCSHP4-201ENST00000538792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
GCSHP4-201ENST00000538792 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
GCSHP4-201ENST00000538792 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
GCSHP4-201ENST00000538792 PHF8Q9UPP1 1060 aa12.64□□□□□ -0.39
GCSHP4-201ENST00000538792 SOX12O15370 315 aa12.62□□□□□ -0.39
GCSHP4-201ENST00000538792 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
GCSHP4-201ENST00000538792 HS6ST3Q8IZP7 471 aa12.62□□□□□ -0.39
GCSHP4-201ENST00000538792 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
GCSHP4-201ENST00000538792 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
GCSHP4-201ENST00000538792 MFRPQ9BY79 579 aa12.59□□□□□ -0.39
GCSHP4-201ENST00000538792 FBXO22Q8NEZ5 403 aa12.58□□□□□ -0.4
GCSHP4-201ENST00000538792 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
GCSHP4-201ENST00000538792 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
GCSHP4-201ENST00000538792 NLRP6P59044 892 aa12.53□□□□□ -0.4
GCSHP4-201ENST00000538792 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
GCSHP4-201ENST00000538792 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
GCSHP4-201ENST00000538792 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
GCSHP4-201ENST00000538792 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
GCSHP4-201ENST00000538792 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
GCSHP4-201ENST00000538792 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
GCSHP4-201ENST00000538792 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
GCSHP4-201ENST00000538792 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
GCSHP4-201ENST00000538792 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
GCSHP4-201ENST00000538792 PPP1R37O75864 691 aa12.43□□□□□ -0.42
GCSHP4-201ENST00000538792 G3V3G9 751 aa12.42□□□□□ -0.42
GCSHP4-201ENST00000538792 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
GCSHP4-201ENST00000538792 GTPBP6O43824 516 aaPredicted RBP12.34□□□□□ -0.43
GCSHP4-201ENST00000538792 LCE2DQ5TA82 110 aaPredicted RBP12.3□□□□□ -0.44
GCSHP4-201ENST00000538792 NISCHQ9Y2I1 1504 aa12.3□□□□□ -0.44
GCSHP4-201ENST00000538792 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
GCSHP4-201ENST00000538792 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
GCSHP4-201ENST00000538792 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
GCSHP4-201ENST00000538792 KIF3CO14782 793 aa12.22□□□□□ -0.45
GCSHP4-201ENST00000538792 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms