RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 POTEHQ6S545 545 aa10.98□□□□□ -0.65
DDB1-210ENST00000538129 BAZ1AQ9NRL2 1556 aaPredicted RBP10.95□□□□□ -0.66
DDB1-210ENST00000538129 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
DDB1-210ENST00000538129 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
DDB1-210ENST00000538129 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
DDB1-210ENST00000538129 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
DDB1-210ENST00000538129 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
DDB1-210ENST00000538129 ATAD2BQ9ULI0 1458 aa10.88□□□□□ -0.67
DDB1-210ENST00000538129 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
DDB1-210ENST00000538129 MROH2BQ7Z745 1585 aa10.88□□□□□ -0.67
DDB1-210ENST00000538129 SMARCA2P51531 1590 aa10.87□□□□□ -0.67
DDB1-210ENST00000538129 HAX1O00165 279 aa10.86□□□□□ -0.67
DDB1-210ENST00000538129 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
DDB1-210ENST00000538129 PEG3Q9GZU2 1588 aa10.85□□□□□ -0.67
DDB1-210ENST00000538129 GSE1Q14687 1217 aa10.84□□□□□ -0.67
DDB1-210ENST00000538129 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
DDB1-210ENST00000538129 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
DDB1-210ENST00000538129 HMGXB3Q12766 1538 aa10.8□□□□□ -0.68
DDB1-210ENST00000538129 CD44P16070 742 aaKnown RBP10.8□□□□□ -0.68
DDB1-210ENST00000538129 BAZ1BQ9UIG0 1483 aaKnown RBP10.79□□□□□ -0.68
DDB1-210ENST00000538129 NUBP1P53384 320 aa10.78□□□□□ -0.68
DDB1-210ENST00000538129 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
DDB1-210ENST00000538129 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
DDB1-210ENST00000538129 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
DDB1-210ENST00000538129 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
DDB1-210ENST00000538129 WIZO95785 1651 aa10.76□□□□□ -0.69
DDB1-210ENST00000538129 CLCN6P51797 869 aa10.75□□□□□ -0.69
DDB1-210ENST00000538129 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
DDB1-210ENST00000538129 RASEFQ8IZ41 740 aa10.73□□□□□ -0.69
DDB1-210ENST00000538129 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
DDB1-210ENST00000538129 TOP2AP11388 1531 aaKnown RBP10.66□□□□□ -0.7
DDB1-210ENST00000538129 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.7
DDB1-210ENST00000538129 SLC24A1O60721 1099 aa10.63□□□□□ -0.71
DDB1-210ENST00000538129 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
DDB1-210ENST00000538129 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
DDB1-210ENST00000538129 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
DDB1-210ENST00000538129 TAOK2Q9UL54 1235 aa10.61□□□□□ -0.71
DDB1-210ENST00000538129 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
DDB1-210ENST00000538129 ECM2O94769 699 aaPredicted RBP10.6□□□□□ -0.71
DDB1-210ENST00000538129 CADPSQ9ULU8 1353 aa10.58□□□□□ -0.72
DDB1-210ENST00000538129 PYGBP11216 843 aa10.58□□□□□ -0.72
DDB1-210ENST00000538129 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
DDB1-210ENST00000538129 ZNF467Q7Z7K2 595 aaPredicted RBP10.56□□□□□ -0.72
DDB1-210ENST00000538129 SP7Q8TDD2 431 aaPredicted RBP10.56□□□□□ -0.72
DDB1-210ENST00000538129 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
DDB1-210ENST00000538129 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
DDB1-210ENST00000538129 NESP48681 1621 aa10.55□□□□□ -0.72
DDB1-210ENST00000538129 PCDHB13Q9Y5F0 798 aa10.55□□□□□ -0.72
DDB1-210ENST00000538129 EVX2Q03828 476 aa10.54□□□□□ -0.72
DDB1-210ENST00000538129 KIF12Q96FN5 646 aa10.54□□□□□ -0.72
DDB1-210ENST00000538129 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
DDB1-210ENST00000538129 PKD2Q13563 968 aa10.52□□□□□ -0.73
DDB1-210ENST00000538129 PDS5BQ9NTI5 1447 aa10.51□□□□□ -0.73
DDB1-210ENST00000538129 CFTRP13569 1480 aa10.51□□□□□ -0.73
DDB1-210ENST00000538129 MAP3K13O43283 966 aa10.51□□□□□ -0.73
DDB1-210ENST00000538129 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
DDB1-210ENST00000538129 GABBR2O75899 941 aa10.48□□□□□ -0.73
DDB1-210ENST00000538129 RIOK3O14730 519 aaKnown RBP10.47□□□□□ -0.73
DDB1-210ENST00000538129 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
DDB1-210ENST00000538129 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
DDB1-210ENST00000538129 MS4A3Q96HJ5 214 aa10.44□□□□□ -0.74
DDB1-210ENST00000538129 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
DDB1-210ENST00000538129 IFNL1Q8IU54 200 aa10.43□□□□□ -0.74
DDB1-210ENST00000538129 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
DDB1-210ENST00000538129 KIF21AQ7Z4S6 1674 aa10.42□□□□□ -0.74
DDB1-210ENST00000538129 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
DDB1-210ENST00000538129 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
DDB1-210ENST00000538129 TIE1P35590 1138 aa10.4□□□□□ -0.74
DDB1-210ENST00000538129 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.74
DDB1-210ENST00000538129 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
DDB1-210ENST00000538129 CUX2O14529 1486 aa10.38□□□□□ -0.75
DDB1-210ENST00000538129 GOLGA2Q08379 1002 aa10.38□□□□□ -0.75
DDB1-210ENST00000538129 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
DDB1-210ENST00000538129 RGL2O15211 777 aa10.37□□□□□ -0.75
DDB1-210ENST00000538129 PSEN1P49768 467 aa10.37□□□□□ -0.75
DDB1-210ENST00000538129 THOC2Q8NI27 1593 aaKnown RBP10.36□□□□□ -0.75
DDB1-210ENST00000538129 TMEM106CQ9BVX2 250 aa10.34□□□□□ -0.75
DDB1-210ENST00000538129 WDR62O43379 1518 aa10.33□□□□□ -0.76
DDB1-210ENST00000538129 ABCC8Q09428 1581 aa10.32□□□□□ -0.76
DDB1-210ENST00000538129 RNF25Q96BH1 459 aaPredicted RBP10.32□□□□□ -0.76
DDB1-210ENST00000538129 DNAJC5Q9H3Z4 198 aa10.31□□□□□ -0.76
DDB1-210ENST00000538129 URB2Q14146 1524 aaKnown RBP10.3□□□□□ -0.76
DDB1-210ENST00000538129 STK25O00506 426 aa10.3□□□□□ -0.76
DDB1-210ENST00000538129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
DDB1-210ENST00000538129 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
DDB1-210ENST00000538129 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
DDB1-210ENST00000538129 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
DDB1-210ENST00000538129 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
DDB1-210ENST00000538129 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
DDB1-210ENST00000538129 CHGAP10645 457 aaKnown RBP10.27□□□□□ -0.77
DDB1-210ENST00000538129 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
DDB1-210ENST00000538129 TOPBP1Q92547 1522 aa10.27□□□□□ -0.77
DDB1-210ENST00000538129 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
DDB1-210ENST00000538129 BCL11BQ9C0K0 894 aaPredicted RBP10.26□□□□□ -0.77
DDB1-210ENST00000538129 DNMBPQ6XZF7 1577 aa10.25□□□□□ -0.77
DDB1-210ENST00000538129 HS6ST3Q8IZP7 471 aa10.24□□□□□ -0.77
DDB1-210ENST00000538129 SLC39A7Q92504 469 aa10.24□□□□□ -0.77
DDB1-210ENST00000538129 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
DDB1-210ENST00000538129 TRIM35Q9UPQ4 493 aa10.24□□□□□ -0.77
DDB1-210ENST00000538129 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms