RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
PICALM-221ENST00000533350 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
PICALM-221ENST00000533350 MIER1Q8N108 512 aa11.51□□□□□ -0.57
PICALM-221ENST00000533350 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
PICALM-221ENST00000533350 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
PICALM-221ENST00000533350 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
PICALM-221ENST00000533350 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
PICALM-221ENST00000533350 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
PICALM-221ENST00000533350 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
PICALM-221ENST00000533350 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
PICALM-221ENST00000533350 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
PICALM-221ENST00000533350 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
PICALM-221ENST00000533350 POTEJP0CG39 1038 aa11.36□□□□□ -0.59
PICALM-221ENST00000533350 C7P10643 843 aa11.36□□□□□ -0.59
PICALM-221ENST00000533350 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
PICALM-221ENST00000533350 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
PICALM-221ENST00000533350 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
PICALM-221ENST00000533350 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
PICALM-221ENST00000533350 ATMINO43313 823 aaPredicted RBP11.32□□□□□ -0.6
PICALM-221ENST00000533350 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
PICALM-221ENST00000533350 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
PICALM-221ENST00000533350 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
PICALM-221ENST00000533350 MS4A3Q96HJ5 214 aa11.28□□□□□ -0.6
PICALM-221ENST00000533350 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
PICALM-221ENST00000533350 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
PICALM-221ENST00000533350 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
PICALM-221ENST00000533350 PKD2Q13563 968 aa11.21□□□□□ -0.61
PICALM-221ENST00000533350 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
PICALM-221ENST00000533350 ATN1P54259 1190 aaPredicted RBP11.18□□□□□ -0.62
PICALM-221ENST00000533350 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
PICALM-221ENST00000533350 POTEFA5A3E0 1075 aa11.11□□□□□ -0.63
PICALM-221ENST00000533350 GSE1Q14687 1217 aa11.11□□□□□ -0.63
PICALM-221ENST00000533350 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
PICALM-221ENST00000533350 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
PICALM-221ENST00000533350 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
PICALM-221ENST00000533350 FAM212AQ96EL1 285 aa11.08□□□□□ -0.64
PICALM-221ENST00000533350 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
PICALM-221ENST00000533350 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
PICALM-221ENST00000533350 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
PICALM-221ENST00000533350 NUBP1P53384 320 aa11.03□□□□□ -0.64
PICALM-221ENST00000533350 RGL2O15211 777 aa11.02□□□□□ -0.65
PICALM-221ENST00000533350 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
PICALM-221ENST00000533350 TIE1P35590 1138 aa11□□□□□ -0.65
PICALM-221ENST00000533350 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
PICALM-221ENST00000533350 SEC24BO95487 1268 aa10.98□□□□□ -0.65
PICALM-221ENST00000533350 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
PICALM-221ENST00000533350 MAP3K13O43283 966 aa10.97□□□□□ -0.65
PICALM-221ENST00000533350 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
PICALM-221ENST00000533350 PLCB2Q00722 1185 aa10.94□□□□□ -0.66
PICALM-221ENST00000533350 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
PICALM-221ENST00000533350 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
PICALM-221ENST00000533350 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
PICALM-221ENST00000533350 ST18O60284 1047 aa10.9□□□□□ -0.66
PICALM-221ENST00000533350 BBXQ8WY36 941 aaPredicted RBP10.9□□□□□ -0.66
PICALM-221ENST00000533350 HAP1P54257 671 aaPredicted RBP10.89□□□□□ -0.67
PICALM-221ENST00000533350 IER5LQ5T953 404 aa10.89□□□□□ -0.67
PICALM-221ENST00000533350 RIOK3O14730 519 aaKnown RBP10.87□□□□□ -0.67
PICALM-221ENST00000533350 PYGBP11216 843 aa10.87□□□□□ -0.67
PICALM-221ENST00000533350 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
PICALM-221ENST00000533350 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
PICALM-221ENST00000533350 CFAP44Q96MT7 982 aa10.85□□□□□ -0.67
PICALM-221ENST00000533350 MMRN1Q13201 1228 aa10.84□□□□□ -0.67
PICALM-221ENST00000533350 PAXIP1Q6ZW49 1069 aaPredicted RBP10.84□□□□□ -0.67
PICALM-221ENST00000533350 SGIP1Q9BQI5 828 aa10.83□□□□□ -0.68
PICALM-221ENST00000533350 SPNS2Q8IVW8 549 aa10.82□□□□□ -0.68
PICALM-221ENST00000533350 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
PICALM-221ENST00000533350 RNF25Q96BH1 459 aaPredicted RBP10.81□□□□□ -0.68
PICALM-221ENST00000533350 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
PICALM-221ENST00000533350 STK25O00506 426 aa10.79□□□□□ -0.68
PICALM-221ENST00000533350 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
PICALM-221ENST00000533350 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
PICALM-221ENST00000533350 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
PICALM-221ENST00000533350 ZNF467Q7Z7K2 595 aaPredicted RBP10.75□□□□□ -0.69
PICALM-221ENST00000533350 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
PICALM-221ENST00000533350 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
PICALM-221ENST00000533350 PLCG2P16885 1265 aa10.72□□□□□ -0.69
PICALM-221ENST00000533350 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
PICALM-221ENST00000533350 IFNL1Q8IU54 200 aa10.7□□□□□ -0.7
PICALM-221ENST00000533350 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
PICALM-221ENST00000533350 BCL11BQ9C0K0 894 aaPredicted RBP10.7□□□□□ -0.7
PICALM-221ENST00000533350 SNPHO15079 494 aa10.69□□□□□ -0.7
PICALM-221ENST00000533350 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
PICALM-221ENST00000533350 TMEM106CQ9BVX2 250 aa10.69□□□□□ -0.7
PICALM-221ENST00000533350 PDAP1Q13442 181 aaKnown RBP10.66□□□□□ -0.7
PICALM-221ENST00000533350 PCDHB8Q9UN66 801 aa10.66□□□□□ -0.7
PICALM-221ENST00000533350 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
PICALM-221ENST00000533350 OCEL1Q9H607 264 aa10.64□□□□□ -0.71
PICALM-221ENST00000533350 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
PICALM-221ENST00000533350 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
PICALM-221ENST00000533350 PSEN1P49768 467 aa10.61□□□□□ -0.71
PICALM-221ENST00000533350 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
PICALM-221ENST00000533350 DNAJC5Q9H3Z4 198 aa10.59□□□□□ -0.71
PICALM-221ENST00000533350 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
PICALM-221ENST00000533350 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
PICALM-221ENST00000533350 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
PICALM-221ENST00000533350 EMP3P54852 163 aa10.51□□□□□ -0.73
PICALM-221ENST00000533350 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
PICALM-221ENST00000533350 CABP2Q9NPB3 220 aa10.5□□□□□ -0.73
PICALM-221ENST00000533350 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
PICALM-221ENST00000533350 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms