RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
GEN1-204ENST00000528873 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
GEN1-204ENST00000528873 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
GEN1-204ENST00000528873 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
GEN1-204ENST00000528873 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
GEN1-204ENST00000528873 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
GEN1-204ENST00000528873 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
GEN1-204ENST00000528873 GSE1Q14687 1217 aa12.97□□□□□ -0.33
GEN1-204ENST00000528873 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
GEN1-204ENST00000528873 MS4A3Q96HJ5 214 aa12.96□□□□□ -0.33
GEN1-204ENST00000528873 MAP3K13O43283 966 aa12.95□□□□□ -0.34
GEN1-204ENST00000528873 CIZ1Q9ULV3 898 aaPredicted RBP12.91□□□□□ -0.34
GEN1-204ENST00000528873 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
GEN1-204ENST00000528873 PYGBP11216 843 aa12.9□□□□□ -0.34
GEN1-204ENST00000528873 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
GEN1-204ENST00000528873 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
GEN1-204ENST00000528873 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
GEN1-204ENST00000528873 CHRM1P11229 460 aaPredicted RBP12.8□□□□□ -0.36
GEN1-204ENST00000528873 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
GEN1-204ENST00000528873 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.37
GEN1-204ENST00000528873 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
GEN1-204ENST00000528873 TIE1P35590 1138 aa12.75□□□□□ -0.37
GEN1-204ENST00000528873 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
GEN1-204ENST00000528873 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
GEN1-204ENST00000528873 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
GEN1-204ENST00000528873 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
GEN1-204ENST00000528873 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
GEN1-204ENST00000528873 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
GEN1-204ENST00000528873 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
GEN1-204ENST00000528873 TMEM106CQ9BVX2 250 aa12.67□□□□□ -0.38
GEN1-204ENST00000528873 SLC39A7Q92504 469 aa12.66□□□□□ -0.38
GEN1-204ENST00000528873 C7P10643 843 aa12.63□□□□□ -0.39
GEN1-204ENST00000528873 LHX8Q68G74 356 aa12.63□□□□□ -0.39
GEN1-204ENST00000528873 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
GEN1-204ENST00000528873 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
GEN1-204ENST00000528873 PSEN1P49768 467 aa12.6□□□□□ -0.39
GEN1-204ENST00000528873 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
GEN1-204ENST00000528873 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
GEN1-204ENST00000528873 PKD2Q13563 968 aa12.55□□□□□ -0.4
GEN1-204ENST00000528873 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
GEN1-204ENST00000528873 SEC24BO95487 1268 aa12.53□□□□□ -0.4
GEN1-204ENST00000528873 IER5LQ5T953 404 aa12.53□□□□□ -0.4
GEN1-204ENST00000528873 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
GEN1-204ENST00000528873 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
GEN1-204ENST00000528873 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
GEN1-204ENST00000528873 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
GEN1-204ENST00000528873 COLQQ9Y215 455 aaPredicted RBP12.48□□□□□ -0.41
GEN1-204ENST00000528873 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
GEN1-204ENST00000528873 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.41
GEN1-204ENST00000528873 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
GEN1-204ENST00000528873 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
GEN1-204ENST00000528873 RGL2O15211 777 aa12.43□□□□□ -0.42
GEN1-204ENST00000528873 PLCG2P16885 1265 aa12.43□□□□□ -0.42
GEN1-204ENST00000528873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
GEN1-204ENST00000528873 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
GEN1-204ENST00000528873 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
GEN1-204ENST00000528873 OCEL1Q9H607 264 aa12.41□□□□□ -0.42
GEN1-204ENST00000528873 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
GEN1-204ENST00000528873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.437e-7■■■■□ 26
GEN1-204ENST00000528873 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
GEN1-204ENST00000528873 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
GEN1-204ENST00000528873 EFCAB3Q8N7B9 438 aa12.34□□□□□ -0.43
GEN1-204ENST00000528873 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
GEN1-204ENST00000528873 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
GEN1-204ENST00000528873 STK25O00506 426 aa12.31□□□□□ -0.44
GEN1-204ENST00000528873 SCUBE2Q9NQ36 999 aa12.31□□□□□ -0.44
GEN1-204ENST00000528873 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
GEN1-204ENST00000528873 SOX12O15370 315 aa12.27□□□□□ -0.45
GEN1-204ENST00000528873 ILDR1Q86SU0 546 aaPredicted RBP12.27□□□□□ -0.45
GEN1-204ENST00000528873 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
GEN1-204ENST00000528873 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
GEN1-204ENST00000528873 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
GEN1-204ENST00000528873 G3V3G9 751 aa12.18□□□□□ -0.46
GEN1-204ENST00000528873 CHGAP10645 457 aaKnown RBP12.18□□□□□ -0.46
GEN1-204ENST00000528873 NLRP6P59044 892 aa12.17□□□□□ -0.46
GEN1-204ENST00000528873 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
GEN1-204ENST00000528873 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
GEN1-204ENST00000528873 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
GEN1-204ENST00000528873 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
GEN1-204ENST00000528873 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
GEN1-204ENST00000528873 BOLA1Q9Y3E2 137 aa12.15□□□□□ -0.46
GEN1-204ENST00000528873 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
GEN1-204ENST00000528873 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
GEN1-204ENST00000528873 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
GEN1-204ENST00000528873 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
GEN1-204ENST00000528873 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
GEN1-204ENST00000528873 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
GEN1-204ENST00000528873 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
GEN1-204ENST00000528873 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
GEN1-204ENST00000528873 DNAJC5Q9H3Z4 198 aa12□□□□□ -0.49
GEN1-204ENST00000528873 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
GEN1-204ENST00000528873 SNPHO15079 494 aa11.97□□□□□ -0.49
GEN1-204ENST00000528873 PPP1R37O75864 691 aa11.96□□□□□ -0.49
GEN1-204ENST00000528873 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
GEN1-204ENST00000528873 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
GEN1-204ENST00000528873 ST18O60284 1047 aa11.88□□□□□ -0.51
GEN1-204ENST00000528873 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
GEN1-204ENST00000528873 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
GEN1-204ENST00000528873 POTEMA6NI47 508 aa11.84□□□□□ -0.51
GEN1-204ENST00000528873 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms