RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 LAMC3Q9Y6N6 1575 aa10.96□□□□□ -0.65
CHKA-204ENST00000528235 CHADLQ6NUI6 762 aa10.96□□□□□ -0.65
CHKA-204ENST00000528235 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
CHKA-204ENST00000528235 STAG3Q9UJ98 1225 aa10.94□□□□□ -0.66
CHKA-204ENST00000528235 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
CHKA-204ENST00000528235 EVX2Q03828 476 aa10.91□□□□□ -0.66
CHKA-204ENST00000528235 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
CHKA-204ENST00000528235 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
CHKA-204ENST00000528235 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
CHKA-204ENST00000528235 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
CHKA-204ENST00000528235 PEG3Q9GZU2 1588 aa10.8□□□□□ -0.68
CHKA-204ENST00000528235 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
CHKA-204ENST00000528235 WDR62O43379 1518 aa10.78□□□□□ -0.68
CHKA-204ENST00000528235 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
CHKA-204ENST00000528235 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
CHKA-204ENST00000528235 GABBR2O75899 941 aa10.73□□□□□ -0.69
CHKA-204ENST00000528235 CADPSQ9ULU8 1353 aa10.73□□□□□ -0.69
CHKA-204ENST00000528235 RIMBP3CA6NJZ7 1639 aa10.72□□□□□ -0.69
CHKA-204ENST00000528235 RIMBP3BA6NNM3 1639 aa10.72□□□□□ -0.69
CHKA-204ENST00000528235 RIMBP3Q9UFD9 1639 aa10.72□□□□□ -0.69
CHKA-204ENST00000528235 CLCN6P51797 869 aa10.7□□□□□ -0.7
CHKA-204ENST00000528235 CEP164Q9UPV0 1460 aa10.69□□□□□ -0.7
CHKA-204ENST00000528235 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
CHKA-204ENST00000528235 PROM2Q8N271 834 aa10.67□□□□□ -0.7
CHKA-204ENST00000528235 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHKA-204ENST00000528235 FANCD2Q9BXW9 1451 aa10.63□□□□□ -0.71
CHKA-204ENST00000528235 ZRANB1Q9UGI0 708 aa10.63□□□□□ -0.71
CHKA-204ENST00000528235 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
CHKA-204ENST00000528235 WIZO95785 1651 aa10.61□□□□□ -0.71
CHKA-204ENST00000528235 ARHGEF11O15085 1522 aa10.6□□□□□ -0.71
CHKA-204ENST00000528235 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
CHKA-204ENST00000528235 PRDM2Q13029 1718 aa10.58□□□□□ -0.72
CHKA-204ENST00000528235 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
CHKA-204ENST00000528235 CYB5RLQ6IPT4 315 aa10.56□□□□□ -0.72
CHKA-204ENST00000528235 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
CHKA-204ENST00000528235 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
CHKA-204ENST00000528235 CHD1O14646 1710 aa10.53□□□□□ -0.72
CHKA-204ENST00000528235 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
CHKA-204ENST00000528235 CFTRP13569 1480 aa10.52□□□□□ -0.73
CHKA-204ENST00000528235 MIER1Q8N108 512 aa10.48□□□□□ -0.73
CHKA-204ENST00000528235 IFT140Q96RY7 1462 aa10.48□□□□□ -0.73
CHKA-204ENST00000528235 ZNF608Q9ULD9 1512 aaPredicted RBP10.48□□□□□ -0.73
CHKA-204ENST00000528235 FKBP8Q14318 412 aa10.47□□□□□ -0.73
CHKA-204ENST00000528235 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
CHKA-204ENST00000528235 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
CHKA-204ENST00000528235 ARAP1Q96P48 1450 aa10.44□□□□□ -0.74
CHKA-204ENST00000528235 LHX8Q68G74 356 aa10.44□□□□□ -0.74
CHKA-204ENST00000528235 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
CHKA-204ENST00000528235 PHF12Q96QT6 1004 aa10.43□□□□□ -0.74
CHKA-204ENST00000528235 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
CHKA-204ENST00000528235 TOP2AP11388 1531 aaKnown RBP10.4□□□□□ -0.74
CHKA-204ENST00000528235 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
CHKA-204ENST00000528235 RSF1Q96T23 1441 aaPredicted RBP10.4□□□□□ -0.75
CHKA-204ENST00000528235 ZBTB47Q9UFB7 747 aaPredicted RBP10.39□□□□□ -0.75
CHKA-204ENST00000528235 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
CHKA-204ENST00000528235 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
CHKA-204ENST00000528235 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.757e-8■■■■□ 20.9
CHKA-204ENST00000528235 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
CHKA-204ENST00000528235 TARBP1Q13395 1621 aaKnown RBP10.34□□□□□ -0.75
CHKA-204ENST00000528235 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
CHKA-204ENST00000528235 FBXO3Q9UK99 471 aa10.32□□□□□ -0.76
CHKA-204ENST00000528235 MS4A3Q96HJ5 214 aa10.31□□□□□ -0.76
CHKA-204ENST00000528235 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
CHKA-204ENST00000528235 RASEFQ8IZ41 740 aa10.28□□□□□ -0.76
CHKA-204ENST00000528235 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
CHKA-204ENST00000528235 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
CHKA-204ENST00000528235 CCDC88BA6NC98 1476 aa10.27□□□□□ -0.77
CHKA-204ENST00000528235 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
CHKA-204ENST00000528235 ASTLQ6HA08 431 aaPredicted RBP10.25□□□□□ -0.77
CHKA-204ENST00000528235 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
CHKA-204ENST00000528235 SNAPC4Q5SXM2 1469 aa10.23□□□□□ -0.77
CHKA-204ENST00000528235 WDR97A6NE52 1622 aa10.23□□□□□ -0.77
CHKA-204ENST00000528235 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
CHKA-204ENST00000528235 TDRD9Q8NDG6 1382 aaKnown RBP10.22□□□□□ -0.77
CHKA-204ENST00000528235 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
CHKA-204ENST00000528235 PBRM1Q86U86 1689 aa10.22□□□□□ -0.77
CHKA-204ENST00000528235 NUBP1P53384 320 aa10.21□□□□□ -0.77
CHKA-204ENST00000528235 SLC39A7Q92504 469 aa10.21□□□□□ -0.77
CHKA-204ENST00000528235 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
CHKA-204ENST00000528235 SOGA1O94964 1423 aa10.21□□□□□ -0.78
CHKA-204ENST00000528235 GAPVD1Q14C86 1478 aa10.21□□□□□ -0.78
CHKA-204ENST00000528235 MAP3K13O43283 966 aa10.2□□□□□ -0.78
CHKA-204ENST00000528235 MAGI1Q96QZ7 1491 aaPredicted RBP10.2□□□□□ -0.78
CHKA-204ENST00000528235 KIF13AQ9H1H9 1805 aa10.2□□□□□ -0.78
CHKA-204ENST00000528235 C7P10643 843 aa10.19□□□□□ -0.78
CHKA-204ENST00000528235 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
CHKA-204ENST00000528235 SGIP1Q9BQI5 828 aa10.18□□□□□ -0.78
CHKA-204ENST00000528235 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
CHKA-204ENST00000528235 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
CHKA-204ENST00000528235 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
CHKA-204ENST00000528235 TIE1P35590 1138 aa10.15□□□□□ -0.78
CHKA-204ENST00000528235 FGD5Q6ZNL6 1462 aa10.15□□□□□ -0.78
CHKA-204ENST00000528235 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
CHKA-204ENST00000528235 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
CHKA-204ENST00000528235 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
CHKA-204ENST00000528235 VASPP50552 380 aaPredicted RBP10.12□□□□□ -0.79
CHKA-204ENST00000528235 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
CHKA-204ENST00000528235 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
CHKA-204ENST00000528235 DCAF8Q5TAQ9 597 aa10.11□□□□□ -0.79
CHKA-204ENST00000528235 ILDR1Q86SU0 546 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms