RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 PIP4P2Q8N4L2 257 aa8.14□□□□□ -1.11
CHD7-205ENST00000527825 ZNF692Q9BU19 519 aaPredicted RBP8.14□□□□□ -1.11
CHD7-205ENST00000527825 SSUH2Q9Y2M2 353 aa8.14□□□□□ -1.11
CHD7-205ENST00000527825 CYB5RLQ6IPT4 315 aa8.11□□□□□ -1.11
CHD7-205ENST00000527825 FXR2P51116 673 aaKnown RBP eCLIP8.1□□□□□ -1.118e-8■■■■■ 31.6
CHD7-205ENST00000527825 CEP164Q9UPV0 1460 aa8.09□□□□□ -1.11
CHD7-205ENST00000527825 SPDYE1Q8NFV5 336 aaPredicted RBP8.07□□□□□ -1.12
CHD7-205ENST00000527825 CLEC11AQ9Y240 323 aa8.06□□□□□ -1.12
CHD7-205ENST00000527825 CADPSQ9ULU8 1353 aa8.05□□□□□ -1.12
CHD7-205ENST00000527825 PEG3Q9GZU2 1588 aa8.05□□□□□ -1.12
CHD7-205ENST00000527825 CHD1O14646 1710 aa8.03□□□□□ -1.12
CHD7-205ENST00000527825 ILDR1Q86SU0 546 aaPredicted RBP8.01□□□□□ -1.13
CHD7-205ENST00000527825 ARAP1Q96P48 1450 aa8□□□□□ -1.13
CHD7-205ENST00000527825 FANCD2Q9BXW9 1451 aa8□□□□□ -1.13
CHD7-205ENST00000527825 PRKAR2AP13861 404 aaKnown RBP7.98□□□□□ -1.13
CHD7-205ENST00000527825 HAX1O00165 279 aa7.97□□□□□ -1.13
CHD7-205ENST00000527825 SP7Q8TDD2 431 aaPredicted RBP7.97□□□□□ -1.13
CHD7-205ENST00000527825 PRDM2Q13029 1718 aa7.95□□□□□ -1.14
CHD7-205ENST00000527825 URB2Q14146 1524 aaKnown RBP7.94□□□□□ -1.14
CHD7-205ENST00000527825 RSF1Q96T23 1441 aaPredicted RBP7.94□□□□□ -1.14
CHD7-205ENST00000527825 PRR29P0C7W0 189 aa7.93□□□□□ -1.14
CHD7-205ENST00000527825 EIF4G3O43432 1585 aaKnown RBP7.93□□□□□ -1.14
CHD7-205ENST00000527825 IFT140Q96RY7 1462 aa7.92□□□□□ -1.14
CHD7-205ENST00000527825 ZNF608Q9ULD9 1512 aaPredicted RBP7.92□□□□□ -1.14
CHD7-205ENST00000527825 MROH2BQ7Z745 1585 aa7.92□□□□□ -1.14
CHD7-205ENST00000527825 SPDYE4A6NLX3 237 aa7.91□□□□□ -1.14
CHD7-205ENST00000527825 CHADLQ6NUI6 762 aa7.91□□□□□ -1.14
CHD7-205ENST00000527825 EVX2Q03828 476 aa7.89□□□□□ -1.15
CHD7-205ENST00000527825 WIZO95785 1651 aa7.86□□□□□ -1.15
CHD7-205ENST00000527825 CFTRP13569 1480 aa7.86□□□□□ -1.15
CHD7-205ENST00000527825 C19orf67A6NJJ6 358 aa7.84□□□□□ -1.15
CHD7-205ENST00000527825 SYNJ1O43426 1573 aa7.83□□□□□ -1.16
CHD7-205ENST00000527825 KIF13AQ9H1H9 1805 aa7.81□□□□□ -1.16
CHD7-205ENST00000527825 STAG3Q9UJ98 1225 aa7.81□□□□□ -1.16
CHD7-205ENST00000527825 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
CHD7-205ENST00000527825 TOPBP1Q92547 1522 aa7.79□□□□□ -1.16
CHD7-205ENST00000527825 FARP1Q9Y4F1 1045 aaPredicted RBP7.79□□□□□ -1.16
CHD7-205ENST00000527825 AQRO60306 1485 aaKnown RBP eCLIP7.79□□□□□ -1.16
CHD7-205ENST00000527825 ABCC8Q09428 1581 aa7.79□□□□□ -1.16
CHD7-205ENST00000527825 TARBP1Q13395 1621 aaKnown RBP7.78□□□□□ -1.16
CHD7-205ENST00000527825 GAPVD1Q14C86 1478 aa7.77□□□□□ -1.17
CHD7-205ENST00000527825 CREBZFQ9NS37 354 aa7.76□□□□□ -1.17
CHD7-205ENST00000527825 DNMBPQ6XZF7 1577 aa7.76□□□□□ -1.17
CHD7-205ENST00000527825 CHMP7Q8WUX9 453 aaPredicted RBP7.75□□□□□ -1.17
CHD7-205ENST00000527825 ERCC6L2Q5T890 1561 aa7.75□□□□□ -1.17
CHD7-205ENST00000527825 SNAPC4Q5SXM2 1469 aa7.74□□□□□ -1.17
CHD7-205ENST00000527825 CD44P16070 742 aaKnown RBP7.73□□□□□ -1.17
CHD7-205ENST00000527825 PROM2Q8N271 834 aa7.73□□□□□ -1.17
CHD7-205ENST00000527825 KDM6BO15054 1643 aa7.72□□□□□ -1.17
CHD7-205ENST00000527825 KDM4FA0A1W2PPD8 638 aa7.72□□□□□ -1.17
CHD7-205ENST00000527825 TSPOAP1O95153 1857 aa7.71□□□□□ -1.18
CHD7-205ENST00000527825 FKBP8Q14318 412 aa7.71□□□□□ -1.18
CHD7-205ENST00000527825 TOP2AP11388 1531 aaKnown RBP7.71□□□□□ -1.18
CHD7-205ENST00000527825 WDR97A6NE52 1622 aa7.7□□□□□ -1.18
CHD7-205ENST00000527825 GABBR2O75899 941 aa7.7□□□□□ -1.18
CHD7-205ENST00000527825 MAGI1Q96QZ7 1491 aaPredicted RBP7.69□□□□□ -1.18
CHD7-205ENST00000527825 HECW2Q9P2P5 1572 aa7.69□□□□□ -1.18
CHD7-205ENST00000527825 PBRM1Q86U86 1689 aa7.69□□□□□ -1.18
CHD7-205ENST00000527825 FBXO41Q8TF61 875 aa7.68□□□□□ -1.18
CHD7-205ENST00000527825 TDRD9Q8NDG6 1382 aaKnown RBP7.67□□□□□ -1.18
CHD7-205ENST00000527825 SYNJ2O15056 1496 aa7.67□□□□□ -1.18
CHD7-205ENST00000527825 POLA1P09884 1462 aaPredicted RBP7.67□□□□□ -1.18
CHD7-205ENST00000527825 LMTK3Q96Q04 1460 aa7.65□□□□□ -1.18
CHD7-205ENST00000527825 GRIN2BQ13224 1484 aa7.64□□□□□ -1.19
CHD7-205ENST00000527825 RAD54L2Q9Y4B4 1467 aa7.64□□□□□ -1.19
CHD7-205ENST00000527825 SOGA1O94964 1423 aa7.64□□□□□ -1.19
CHD7-205ENST00000527825 FAM69CQ0P6D2 419 aa7.64□□□□□ -1.19
CHD7-205ENST00000527825 MNX1P50219 401 aaPredicted RBP7.63□□□□□ -1.19
CHD7-205ENST00000527825 ZRANB1Q9UGI0 708 aa7.63□□□□□ -1.19
CHD7-205ENST00000527825 ADGRL1O94910 1474 aa7.62□□□□□ -1.19
CHD7-205ENST00000527825 ZNF579Q8NAF0 562 aaKnown RBP7.62□□□□□ -1.19
CHD7-205ENST00000527825 NPM1P06748 294 aaKnown RBP eCLIP7.61□□□□□ -1.19
CHD7-205ENST00000527825 CEP170Q5SW79 1584 aa7.61□□□□□ -1.19
CHD7-205ENST00000527825 DIP2BQ9P265 1576 aa7.61□□□□□ -1.19
CHD7-205ENST00000527825 ABCC10Q5T3U5 1492 aa7.6□□□□□ -1.19
CHD7-205ENST00000527825 CCDC88BA6NC98 1476 aa7.58□□□□□ -1.2
CHD7-205ENST00000527825 CLCN6P51797 869 aa7.58□□□□□ -1.2
CHD7-205ENST00000527825 FGD5Q6ZNL6 1462 aa7.57□□□□□ -1.2
CHD7-205ENST00000527825 SOCS7O14512 581 aa7.57□□□□□ -1.2
CHD7-205ENST00000527825 PAK3O75914 559 aaPredicted RBP7.57□□□□□ -1.2
CHD7-205ENST00000527825 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
CHD7-205ENST00000527825 MAPKBP1O60336 1514 aa7.56□□□□□ -1.2
CHD7-205ENST00000527825 POTEIP0CG38 1075 aa7.55□□□□□ -1.2
CHD7-205ENST00000527825 PHF12Q96QT6 1004 aa7.54□□□□□ -1.2
CHD7-205ENST00000527825 GRIN2AQ12879 1464 aa7.54□□□□□ -1.2
CHD7-205ENST00000527825 MIER1Q8N108 512 aa7.53□□□□□ -1.2
CHD7-205ENST00000527825 TOP2BQ02880 1626 aa7.52□□□□□ -1.2
CHD7-205ENST00000527825 DISP3Q9P2K9 1392 aa7.52□□□□□ -1.21
CHD7-205ENST00000527825 GALR2O43603 387 aaPredicted RBP7.52□□□□□ -1.21
CHD7-205ENST00000527825 PLEKHG5O94827 1062 aa7.51□□□□□ -1.21
CHD7-205ENST00000527825 DCBLD2Q96PD2 775 aa7.51□□□□□ -1.21
CHD7-205ENST00000527825 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
CHD7-205ENST00000527825 ADCY10Q96PN6 1610 aa7.5□□□□□ -1.21
CHD7-205ENST00000527825 ADAMTS12P58397 1594 aa7.5□□□□□ -1.21
CHD7-205ENST00000527825 TSPYL2Q9H2G4 693 aaPredicted RBP7.49□□□□□ -1.21
CHD7-205ENST00000527825 NUP160Q12769 1436 aa7.49□□□□□ -1.21
CHD7-205ENST00000527825 PRG4Q92954 1404 aaPredicted RBP7.49□□□□□ -1.21
CHD7-205ENST00000527825 ILDR2Q71H61 639 aa7.48□□□□□ -1.21
CHD7-205ENST00000527825 PLCD3Q8N3E9 789 aa7.48□□□□□ -1.21
CHD7-205ENST00000527825 PPRC1Q5VV67 1664 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms