RNA–Protein interactions for RNA: ENST00000524579.1

CTNND1-209, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-209ENST00000524579 GSE1Q14687 1217 aa13.59□□□□□ -0.23
CTNND1-209ENST00000524579 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
CTNND1-209ENST00000524579 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
CTNND1-209ENST00000524579 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
CTNND1-209ENST00000524579 PYGBP11216 843 aa13.51□□□□□ -0.25
CTNND1-209ENST00000524579 PKD2Q13563 968 aa13.49□□□□□ -0.25
CTNND1-209ENST00000524579 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
CTNND1-209ENST00000524579 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
CTNND1-209ENST00000524579 MAP3K13O43283 966 aa13.44□□□□□ -0.26
CTNND1-209ENST00000524579 GABBR2O75899 941 aa13.42□□□□□ -0.26
CTNND1-209ENST00000524579 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
CTNND1-209ENST00000524579 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
CTNND1-209ENST00000524579 CHRM1P11229 460 aaPredicted RBP13.41□□□□□ -0.26
CTNND1-209ENST00000524579 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
CTNND1-209ENST00000524579 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
CTNND1-209ENST00000524579 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
CTNND1-209ENST00000524579 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
CTNND1-209ENST00000524579 MS4A3Q96HJ5 214 aa13.37□□□□□ -0.27
CTNND1-209ENST00000524579 CLCN6P51797 869 aa13.34□□□□□ -0.27
CTNND1-209ENST00000524579 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
CTNND1-209ENST00000524579 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
CTNND1-209ENST00000524579 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
CTNND1-209ENST00000524579 RGL2O15211 777 aa13.29□□□□□ -0.28
CTNND1-209ENST00000524579 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
CTNND1-209ENST00000524579 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
CTNND1-209ENST00000524579 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
CTNND1-209ENST00000524579 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
CTNND1-209ENST00000524579 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
CTNND1-209ENST00000524579 PSEN1P49768 467 aa13.17□□□□□ -0.3
CTNND1-209ENST00000524579 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
CTNND1-209ENST00000524579 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
CTNND1-209ENST00000524579 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
CTNND1-209ENST00000524579 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
CTNND1-209ENST00000524579 VGFO15240 615 aaPredicted RBP13.14□□□□□ -0.31
CTNND1-209ENST00000524579 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
CTNND1-209ENST00000524579 TIE1P35590 1138 aa13.14□□□□□ -0.31
CTNND1-209ENST00000524579 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
CTNND1-209ENST00000524579 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
CTNND1-209ENST00000524579 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
CTNND1-209ENST00000524579 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
CTNND1-209ENST00000524579 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
CTNND1-209ENST00000524579 ASTLQ6HA08 431 aaPredicted RBP13.1□□□□□ -0.31
CTNND1-209ENST00000524579 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
CTNND1-209ENST00000524579 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
CTNND1-209ENST00000524579 STK25O00506 426 aa13.04□□□□□ -0.32
CTNND1-209ENST00000524579 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
CTNND1-209ENST00000524579 TRIM35Q9UPQ4 493 aa13.04□□□□□ -0.32
CTNND1-209ENST00000524579 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
CTNND1-209ENST00000524579 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
CTNND1-209ENST00000524579 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
CTNND1-209ENST00000524579 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
CTNND1-209ENST00000524579 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
CTNND1-209ENST00000524579 EFCAB3Q8N7B9 438 aa12.95□□□□□ -0.34
CTNND1-209ENST00000524579 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
CTNND1-209ENST00000524579 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
CTNND1-209ENST00000524579 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
CTNND1-209ENST00000524579 C7P10643 843 aa12.9□□□□□ -0.34
CTNND1-209ENST00000524579 IER5LQ5T953 404 aa12.88□□□□□ -0.35
CTNND1-209ENST00000524579 SEC24BO95487 1268 aa12.86□□□□□ -0.35
CTNND1-209ENST00000524579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTNND1-209ENST00000524579 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
CTNND1-209ENST00000524579 IRX5P78411 483 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-209ENST00000524579 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
CTNND1-209ENST00000524579 SOX12O15370 315 aa12.83□□□□□ -0.36
CTNND1-209ENST00000524579 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
CTNND1-209ENST00000524579 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
CTNND1-209ENST00000524579 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
CTNND1-209ENST00000524579 PLCG2P16885 1265 aa12.8□□□□□ -0.36
CTNND1-209ENST00000524579 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
CTNND1-209ENST00000524579 DNAJC5Q9H3Z4 198 aa12.8□□□□□ -0.36
CTNND1-209ENST00000524579 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
CTNND1-209ENST00000524579 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
CTNND1-209ENST00000524579 NLRP6P59044 892 aa12.77□□□□□ -0.37
CTNND1-209ENST00000524579 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
CTNND1-209ENST00000524579 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
CTNND1-209ENST00000524579 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
CTNND1-209ENST00000524579 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
CTNND1-209ENST00000524579 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
CTNND1-209ENST00000524579 GTPBP6O43824 516 aaPredicted RBP12.69□□□□□ -0.38
CTNND1-209ENST00000524579 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
CTNND1-209ENST00000524579 POTEJP0CG39 1038 aa12.68□□□□□ -0.38
CTNND1-209ENST00000524579 PPP1R37O75864 691 aa12.67□□□□□ -0.38
CTNND1-209ENST00000524579 LHX8Q68G74 356 aa12.66□□□□□ -0.38
CTNND1-209ENST00000524579 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
CTNND1-209ENST00000524579 L3MBTL3Q96JM7 780 aaPredicted RBP12.63□□□□□ -0.39
CTNND1-209ENST00000524579 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
CTNND1-209ENST00000524579 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
CTNND1-209ENST00000524579 RYDENQ9NUL5 291 aaKnown RBP12.62□□□□□ -0.39
CTNND1-209ENST00000524579 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
CTNND1-209ENST00000524579 G3V3G9 751 aa12.59□□□□□ -0.39
CTNND1-209ENST00000524579 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
CTNND1-209ENST00000524579 TMEM121BQ9BXQ6 578 aaPredicted RBP12.55□□□□□ -0.4
CTNND1-209ENST00000524579 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
CTNND1-209ENST00000524579 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
CTNND1-209ENST00000524579 C3orf67Q6ZVT6 689 aa12.51□□□□□ -0.41
CTNND1-209ENST00000524579 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
CTNND1-209ENST00000524579 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
CTNND1-209ENST00000524579 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
CTNND1-209ENST00000524579 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
CTNND1-209ENST00000524579 TMEM92Q6UXU6 159 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms