RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 RNF25Q96BH1 459 aaPredicted RBP17.37■□□□□ 0.37
PFDN1-207ENST00000524074 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
PFDN1-207ENST00000524074 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
PFDN1-207ENST00000524074 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
PFDN1-207ENST00000524074 RIOK3O14730 519 aaKnown RBP17.29■□□□□ 0.36
PFDN1-207ENST00000524074 GTPBP6O43824 516 aaPredicted RBP17.28■□□□□ 0.36
PFDN1-207ENST00000524074 STK25O00506 426 aa17.21■□□□□ 0.35
PFDN1-207ENST00000524074 DCAF8Q5TAQ9 597 aa17.21■□□□□ 0.35
PFDN1-207ENST00000524074 NUBP1P53384 320 aa17.18■□□□□ 0.34
PFDN1-207ENST00000524074 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
PFDN1-207ENST00000524074 TMEM132AQ24JP5 1023 aa17.16■□□□□ 0.34
PFDN1-207ENST00000524074 RYDENQ9NUL5 291 aaKnown RBP17.13■□□□□ 0.33
PFDN1-207ENST00000524074 ARXQ96QS3 562 aa17.11■□□□□ 0.33
PFDN1-207ENST00000524074 FAM212AQ96EL1 285 aa17.09■□□□□ 0.33
PFDN1-207ENST00000524074 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
PFDN1-207ENST00000524074 STK24Q9Y6E0 443 aa17.03■□□□□ 0.32
PFDN1-207ENST00000524074 BCL11BQ9C0K0 894 aaPredicted RBP17.01■□□□□ 0.31
PFDN1-207ENST00000524074 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
PFDN1-207ENST00000524074 CHRM1P11229 460 aaPredicted RBP16.97■□□□□ 0.31
PFDN1-207ENST00000524074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
PFDN1-207ENST00000524074 ZFP91Q96JP5 570 aaPredicted RBP16.96■□□□□ 0.31
PFDN1-207ENST00000524074 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
PFDN1-207ENST00000524074 WDR70Q9NW82 654 aa16.89■□□□□ 0.29
PFDN1-207ENST00000524074 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
PFDN1-207ENST00000524074 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
PFDN1-207ENST00000524074 DAXXQ9UER7 740 aaPredicted RBP16.87■□□□□ 0.29
PFDN1-207ENST00000524074 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
PFDN1-207ENST00000524074 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
PFDN1-207ENST00000524074 KCNV2Q8TDN2 545 aa16.81■□□□□ 0.28
PFDN1-207ENST00000524074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.28
PFDN1-207ENST00000524074 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
PFDN1-207ENST00000524074 HOMEZQ8IX15 550 aa16.79■□□□□ 0.28
PFDN1-207ENST00000524074 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
PFDN1-207ENST00000524074 PYGBP11216 843 aa16.78■□□□□ 0.28
PFDN1-207ENST00000524074 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
PFDN1-207ENST00000524074 CADPS2Q86UW7 1296 aa16.7■□□□□ 0.26
PFDN1-207ENST00000524074 BRPF1P55201 1214 aaPredicted RBP16.68■□□□□ 0.26
PFDN1-207ENST00000524074 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
PFDN1-207ENST00000524074 ZNF467Q7Z7K2 595 aaPredicted RBP16.6■□□□□ 0.25
PFDN1-207ENST00000524074 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
PFDN1-207ENST00000524074 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
PFDN1-207ENST00000524074 ZC3H15Q8WU90 426 aaKnown RBP16.56■□□□□ 0.24
PFDN1-207ENST00000524074 ARHGEF1Q92888 912 aaKnown RBP16.56■□□□□ 0.24
PFDN1-207ENST00000524074 PDAP1Q13442 181 aaKnown RBP16.54■□□□□ 0.24
PFDN1-207ENST00000524074 E2F4Q16254 413 aa16.47■□□□□ 0.23
PFDN1-207ENST00000524074 SLC24A3Q9HC58 644 aa16.47■□□□□ 0.23
PFDN1-207ENST00000524074 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
PFDN1-207ENST00000524074 MFRPQ9BY79 579 aa16.45■□□□□ 0.22
PFDN1-207ENST00000524074 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
PFDN1-207ENST00000524074 SEMA3EO15041 775 aa16.41■□□□□ 0.22
PFDN1-207ENST00000524074 TSPYL2Q9H2G4 693 aaPredicted RBP16.41■□□□□ 0.22
PFDN1-207ENST00000524074 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
PFDN1-207ENST00000524074 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
PFDN1-207ENST00000524074 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
PFDN1-207ENST00000524074 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
PFDN1-207ENST00000524074 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
PFDN1-207ENST00000524074 PSEN1P49768 467 aa16.37■□□□□ 0.21
PFDN1-207ENST00000524074 SMYD5Q6GMV2 418 aa16.34■□□□□ 0.21
PFDN1-207ENST00000524074 PPP1R37O75864 691 aa16.31■□□□□ 0.2
PFDN1-207ENST00000524074 ZMYND10O75800 440 aa16.3■□□□□ 0.2
PFDN1-207ENST00000524074 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
PFDN1-207ENST00000524074 NLRP6P59044 892 aa16.29■□□□□ 0.2
PFDN1-207ENST00000524074 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
PFDN1-207ENST00000524074 FBXO22Q8NEZ5 403 aa16.23■□□□□ 0.19
PFDN1-207ENST00000524074 SOX12O15370 315 aa16.22■□□□□ 0.19
PFDN1-207ENST00000524074 EFCAB3Q8N7B9 438 aa16.21■□□□□ 0.19
PFDN1-207ENST00000524074 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
PFDN1-207ENST00000524074 BARGINQ6ZT62 677 aa16.18■□□□□ 0.18
PFDN1-207ENST00000524074 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
PFDN1-207ENST00000524074 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
PFDN1-207ENST00000524074 PDE4AP27815 886 aa16.17■□□□□ 0.18
PFDN1-207ENST00000524074 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
PFDN1-207ENST00000524074 CCDC61Q9Y6R9 512 aa16.17■□□□□ 0.18
PFDN1-207ENST00000524074 FARP1Q9Y4F1 1045 aaPredicted RBP16.15■□□□□ 0.18
PFDN1-207ENST00000524074 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
PFDN1-207ENST00000524074 AK7Q96M32 723 aa16.13■□□□□ 0.17
PFDN1-207ENST00000524074 MFSD10Q14728 455 aa16.11■□□□□ 0.17
PFDN1-207ENST00000524074 ARIH1Q9Y4X5 557 aaPredicted RBP16.11■□□□□ 0.17
PFDN1-207ENST00000524074 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
PFDN1-207ENST00000524074 DDX27Q96GQ7 796 aaKnown RBP16.08■□□□□ 0.16
PFDN1-207ENST00000524074 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
PFDN1-207ENST00000524074 GPIHBP1Q8IV16 184 aa16.06■□□□□ 0.16
PFDN1-207ENST00000524074 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
PFDN1-207ENST00000524074 CRISPLD2Q9H0B8 497 aa16.04■□□□□ 0.16
PFDN1-207ENST00000524074 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
PFDN1-207ENST00000524074 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
PFDN1-207ENST00000524074 ZMYND15Q9H091 742 aa16.02■□□□□ 0.16
PFDN1-207ENST00000524074 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
PFDN1-207ENST00000524074 CAMK2BQ13554 666 aa16■□□□□ 0.15
PFDN1-207ENST00000524074 RBM26Q5T8P6 1007 aaKnown RBP16■□□□□ 0.15
PFDN1-207ENST00000524074 RSPH6AQ9H0K4 717 aa15.98■□□□□ 0.15
PFDN1-207ENST00000524074 KDM4CQ9H3R0 1056 aa15.98■□□□□ 0.15
PFDN1-207ENST00000524074 MAP3K13O43283 966 aa15.97■□□□□ 0.15
PFDN1-207ENST00000524074 UBTFP17480 764 aaKnown RBP15.95■□□□□ 0.14
PFDN1-207ENST00000524074 MLLT3P42568 568 aaPredicted RBP15.93■□□□□ 0.14
PFDN1-207ENST00000524074 KIF12Q96FN5 646 aa15.93■□□□□ 0.14
PFDN1-207ENST00000524074 MS4A4AQ96JQ5 239 aa15.93■□□□□ 0.14
PFDN1-207ENST00000524074 TRIM66O15016 1216 aa15.9■□□□□ 0.14
PFDN1-207ENST00000524074 PDE4DQ08499 809 aa15.9■□□□□ 0.14
PFDN1-207ENST00000524074 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms