RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 PLCD3Q8N3E9 789 aa14.17□□□□□ -0.14
NSMCE2-211ENST00000523549 KIF12Q96FN5 646 aa14.13□□□□□ -0.15
NSMCE2-211ENST00000523549 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
NSMCE2-211ENST00000523549 ASTLQ6HA08 431 aaPredicted RBP14.1□□□□□ -0.15
NSMCE2-211ENST00000523549 NUBP1P53384 320 aa14.09□□□□□ -0.15
NSMCE2-211ENST00000523549 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
NSMCE2-211ENST00000523549 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
NSMCE2-211ENST00000523549 POTEB2H3BUK9 544 aa14.04□□□□□ -0.16
NSMCE2-211ENST00000523549 MAP3K13O43283 966 aa14.04□□□□□ -0.16
NSMCE2-211ENST00000523549 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
NSMCE2-211ENST00000523549 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
NSMCE2-211ENST00000523549 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
NSMCE2-211ENST00000523549 C7P10643 843 aa13.95□□□□□ -0.18
NSMCE2-211ENST00000523549 SLC39A7Q92504 469 aa13.95□□□□□ -0.18
NSMCE2-211ENST00000523549 SGIP1Q9BQI5 828 aa13.95□□□□□ -0.18
NSMCE2-211ENST00000523549 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
NSMCE2-211ENST00000523549 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
NSMCE2-211ENST00000523549 METRNQ9UJH8 293 aa13.93□□□□□ -0.18
NSMCE2-211ENST00000523549 TIE1P35590 1138 aa13.92□□□□□ -0.18
NSMCE2-211ENST00000523549 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
NSMCE2-211ENST00000523549 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
NSMCE2-211ENST00000523549 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
NSMCE2-211ENST00000523549 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
NSMCE2-211ENST00000523549 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
NSMCE2-211ENST00000523549 POTEFA5A3E0 1075 aa13.83□□□□□ -0.2
NSMCE2-211ENST00000523549 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
NSMCE2-211ENST00000523549 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
NSMCE2-211ENST00000523549 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
NSMCE2-211ENST00000523549 PYGBP11216 843 aa13.74□□□□□ -0.21
NSMCE2-211ENST00000523549 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
NSMCE2-211ENST00000523549 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
NSMCE2-211ENST00000523549 IER5LQ5T953 404 aa13.7□□□□□ -0.22
NSMCE2-211ENST00000523549 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
NSMCE2-211ENST00000523549 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
NSMCE2-211ENST00000523549 GSE1Q14687 1217 aa13.68□□□□□ -0.22
NSMCE2-211ENST00000523549 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
NSMCE2-211ENST00000523549 CHRM1P11229 460 aaPredicted RBP13.64□□□□□ -0.23
NSMCE2-211ENST00000523549 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
NSMCE2-211ENST00000523549 SEC24BO95487 1268 aa13.63□□□□□ -0.23
NSMCE2-211ENST00000523549 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
NSMCE2-211ENST00000523549 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
NSMCE2-211ENST00000523549 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
NSMCE2-211ENST00000523549 ZNF467Q7Z7K2 595 aaPredicted RBP13.54□□□□□ -0.24
NSMCE2-211ENST00000523549 PLCG2P16885 1265 aa13.49□□□□□ -0.25
NSMCE2-211ENST00000523549 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
NSMCE2-211ENST00000523549 OCEL1Q9H607 264 aa13.48□□□□□ -0.25
NSMCE2-211ENST00000523549 POTEMA6NI47 508 aa13.47□□□□□ -0.25
NSMCE2-211ENST00000523549 CIZ1Q9ULV3 898 aaPredicted RBP13.45□□□□□ -0.26
NSMCE2-211ENST00000523549 POTEGQ6S5H5 508 aa13.44□□□□□ -0.26
NSMCE2-211ENST00000523549 PSEN1P49768 467 aa13.43□□□□□ -0.26
NSMCE2-211ENST00000523549 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
NSMCE2-211ENST00000523549 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
NSMCE2-211ENST00000523549 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
NSMCE2-211ENST00000523549 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
NSMCE2-211ENST00000523549 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
NSMCE2-211ENST00000523549 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
NSMCE2-211ENST00000523549 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
NSMCE2-211ENST00000523549 TRIM41Q8WV44 630 aa13.32□□□□□ -0.28
NSMCE2-211ENST00000523549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.283e-10■■■■■ 39.1
NSMCE2-211ENST00000523549 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
NSMCE2-211ENST00000523549 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
NSMCE2-211ENST00000523549 CABP2Q9NPB3 220 aa13.25□□□□□ -0.29
NSMCE2-211ENST00000523549 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
NSMCE2-211ENST00000523549 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
NSMCE2-211ENST00000523549 ST18O60284 1047 aa13.22□□□□□ -0.29
NSMCE2-211ENST00000523549 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.29
NSMCE2-211ENST00000523549 RNF25Q96BH1 459 aaPredicted RBP13.19□□□□□ -0.3
NSMCE2-211ENST00000523549 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
NSMCE2-211ENST00000523549 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
NSMCE2-211ENST00000523549 SNPHO15079 494 aa13.13□□□□□ -0.31
NSMCE2-211ENST00000523549 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
NSMCE2-211ENST00000523549 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
NSMCE2-211ENST00000523549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.08□□□□□ -0.32
NSMCE2-211ENST00000523549 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
NSMCE2-211ENST00000523549 ZFP91Q96JP5 570 aaPredicted RBP13.08□□□□□ -0.32
NSMCE2-211ENST00000523549 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
NSMCE2-211ENST00000523549 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
NSMCE2-211ENST00000523549 SOX12O15370 315 aa13.03□□□□□ -0.32
NSMCE2-211ENST00000523549 G3V3G9 751 aa12.99□□□□□ -0.33
NSMCE2-211ENST00000523549 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
NSMCE2-211ENST00000523549 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
NSMCE2-211ENST00000523549 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
NSMCE2-211ENST00000523549 PKD2Q13563 968 aa12.95□□□□□ -0.34
NSMCE2-211ENST00000523549 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
NSMCE2-211ENST00000523549 MICALL2Q8IY33 904 aa12.93□□□□□ -0.34
NSMCE2-211ENST00000523549 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
NSMCE2-211ENST00000523549 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
NSMCE2-211ENST00000523549 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
NSMCE2-211ENST00000523549 TMEM92Q6UXU6 159 aa12.9□□□□□ -0.34
NSMCE2-211ENST00000523549 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
NSMCE2-211ENST00000523549 POTEB3A0JP26 581 aa12.87□□□□□ -0.35
NSMCE2-211ENST00000523549 POTEBQ6S5H4 581 aa12.87□□□□□ -0.35
NSMCE2-211ENST00000523549 RGL2O15211 777 aa12.86□□□□□ -0.35
NSMCE2-211ENST00000523549 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
NSMCE2-211ENST00000523549 EMP3P54852 163 aa12.85□□□□□ -0.35
NSMCE2-211ENST00000523549 NLRP6P59044 892 aa12.85□□□□□ -0.35
NSMCE2-211ENST00000523549 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
NSMCE2-211ENST00000523549 STK25O00506 426 aa12.82□□□□□ -0.36
NSMCE2-211ENST00000523549 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
NSMCE2-211ENST00000523549 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms