RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	POTEB2	H3BUK9	544 aa		14.23	□□□□□ -0.13
EIF3E-216	ENST00000522887	PCDH10	Q9P2E7	1040 aa		14.23	□□□□□ -0.13
EIF3E-216	ENST00000522887	PLEKHG5	O94827	1062 aa		14.2	□□□□□ -0.14
EIF3E-216	ENST00000522887	MAMSTR	Q6ZN01	415 aa		14.2	□□□□□ -0.14
EIF3E-216	ENST00000522887	SLC39A7	Q92504	469 aa		14.17	□□□□□ -0.14
EIF3E-216	ENST00000522887	METRN	Q9UJH8	293 aa		14.17	□□□□□ -0.14
EIF3E-216	ENST00000522887	C7	P10643	843 aa		14.15	□□□□□ -0.14
EIF3E-216	ENST00000522887	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14.15	□□□□□ -0.14
EIF3E-216	ENST00000522887	PELP1	Q8IZL8	1130 aa	Known RBP	14.12	□□□□□ -0.15
EIF3E-216	ENST00000522887	PLCD3	Q8N3E9	789 aa		14.11	□□□□□ -0.15
EIF3E-216	ENST00000522887	ASTL	Q6HA08	431 aa	Predicted RBP	14.09	□□□□□ -0.15
EIF3E-216	ENST00000522887	MIER1	Q8N108	512 aa		14.09	□□□□□ -0.15
EIF3E-216	ENST00000522887	SCUBE2	Q9NQ36	999 aa		14.08	□□□□□ -0.16
EIF3E-216	ENST00000522887	MS4A3	Q96HJ5	214 aa		14.07	□□□□□ -0.16
EIF3E-216	ENST00000522887	ATMIN	O43313	823 aa	Predicted RBP	14.05	□□□□□ -0.16
EIF3E-216	ENST00000522887	FAM163A	Q96GL9	167 aa	Predicted RBP	14.01	□□□□□ -0.17
EIF3E-216	ENST00000522887	IFNLR1	Q8IU57	520 aa	Predicted RBP	14	□□□□□ -0.17
EIF3E-216	ENST00000522887	MNX1	P50219	401 aa	Predicted RBP	13.99	□□□□□ -0.17
EIF3E-216	ENST00000522887	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.96	□□□□□ -0.17
EIF3E-216	ENST00000522887	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.96	□□□□□ -0.17
EIF3E-216	ENST00000522887	KLHL34	Q8N239	644 aa		13.95	□□□□□ -0.18
EIF3E-216	ENST00000522887	SPOCK2	Q92563	424 aa		13.93	□□□□□ -0.18
EIF3E-216	ENST00000522887	POTEJ	P0CG39	1038 aa		13.91	□□□□□ -0.18
EIF3E-216	ENST00000522887	ATN1	P54259	1190 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF3E-216	ENST00000522887	SEC24B	O95487	1268 aa		13.82	□□□□□ -0.2
EIF3E-216	ENST00000522887	CCDC61	Q9Y6R9	512 aa		13.82	□□□□□ -0.2
EIF3E-216	ENST00000522887	LCE2D	Q5TA82	110 aa	Predicted RBP	13.8	□□□□□ -0.2
EIF3E-216	ENST00000522887	KIF12	Q96FN5	646 aa		13.79	□□□□□ -0.2
EIF3E-216	ENST00000522887	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.78	□□□□□ -0.2
EIF3E-216	ENST00000522887	TIE1	P35590	1138 aa		13.76	□□□□□ -0.21
EIF3E-216	ENST00000522887	NUBP1	P53384	320 aa		13.75	□□□□□ -0.21
EIF3E-216	ENST00000522887	GSE1	Q14687	1217 aa		13.74	□□□□□ -0.21
EIF3E-216	ENST00000522887	TRIM41	Q8WV44	630 aa		13.74	□□□□□ -0.21
EIF3E-216	ENST00000522887	FAM212A	Q96EL1	285 aa		13.72	□□□□□ -0.21
EIF3E-216	ENST00000522887	CDAN1	Q8IWY9	1227 aa		13.71	□□□□□ -0.21
EIF3E-216	ENST00000522887	MAP3K13	O43283	966 aa		13.69	□□□□□ -0.22
EIF3E-216	ENST00000522887	RTN4	Q9NQC3	1192 aa	Known RBP	13.69	□□□□□ -0.22
EIF3E-216	ENST00000522887	POTEF	A5A3E0	1075 aa		13.67	□□□□□ -0.22
EIF3E-216	ENST00000522887	TRPC6	Q9Y210	931 aa		13.65	□□□□□ -0.22
EIF3E-216	ENST00000522887	TTLL13P	A6NNM8	815 aa		13.63	□□□□□ -0.23
EIF3E-216	ENST00000522887	IER5L	Q5T953	404 aa		13.63	□□□□□ -0.23
EIF3E-216	ENST00000522887	RASEF	Q8IZ41	740 aa		13.61	□□□□□ -0.23
EIF3E-216	ENST00000522887	COLQ	Q9Y215	455 aa	Predicted RBP	13.61	□□□□□ -0.23
EIF3E-216	ENST00000522887	SLAIN1	Q8ND83	568 aa		13.59	□□□□□ -0.23
EIF3E-216	ENST00000522887	TRIM35	Q9UPQ4	493 aa		13.59	□□□□□ -0.23
EIF3E-216	ENST00000522887	PKD2	Q13563	968 aa		13.58	□□□□□ -0.24
EIF3E-216	ENST00000522887	DCAF8	Q5TAQ9	597 aa		13.58	□□□□□ -0.24
EIF3E-216	ENST00000522887	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.58	□□□□□ -0.24
EIF3E-216	ENST00000522887	CHRM1	P11229	460 aa	Predicted RBP	13.56	□□□□□ -0.24
EIF3E-216	ENST00000522887	PCDHB13	Q9Y5F0	798 aa		13.56	□□□□□ -0.24
EIF3E-216	ENST00000522887	SGIP1	Q9BQI5	828 aa		13.55	□□□□□ -0.24
EIF3E-216	ENST00000522887	PLCG2	P16885	1265 aa		13.52	□□□□□ -0.25
EIF3E-216	ENST00000522887	ST18	O60284	1047 aa		13.51	□□□□□ -0.25
EIF3E-216	ENST00000522887	ECM2	O94769	699 aa	Predicted RBP	13.5	□□□□□ -0.25
EIF3E-216	ENST00000522887	TAOK2	Q9UL54	1235 aa		13.46	□□□□□ -0.25
EIF3E-216	ENST00000522887	TMEM106C	Q9BVX2	250 aa		13.44	□□□□□ -0.26
EIF3E-216	ENST00000522887	SNPH	O15079	494 aa		13.43	□□□□□ -0.26
EIF3E-216	ENST00000522887	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.43	□□□□□ -0.26
EIF3E-216	ENST00000522887	MMRN1	Q13201	1228 aa		13.38	□□□□□ -0.27
EIF3E-216	ENST00000522887	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.38	□□□□□ -0.27
EIF3E-216	ENST00000522887	IFNL1	Q8IU54	200 aa		13.37	□□□□□ -0.27
EIF3E-216	ENST00000522887	RIOK3	O14730	519 aa	Known RBP	13.35	□□□□□ -0.27
EIF3E-216	ENST00000522887	PYGB	P11216	843 aa		13.35	□□□□□ -0.27
EIF3E-216	ENST00000522887	SPNS2	Q8IVW8	549 aa		13.34	□□□□□ -0.27
EIF3E-216	ENST00000522887	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.34	□□□□□ -0.27
EIF3E-216	ENST00000522887	RGL2	O15211	777 aa		13.31	□□□□□ -0.28
EIF3E-216	ENST00000522887	OCEL1	Q9H607	264 aa		13.31	□□□□□ -0.28
EIF3E-216	ENST00000522887	VGF	O15240	615 aa	Predicted RBP	13.29	□□□□□ -0.28
EIF3E-216	ENST00000522887	IRX5	P78411	483 aa	Predicted RBP	13.29	□□□□□ -0.28
EIF3E-216	ENST00000522887	RNF25	Q96BH1	459 aa	Predicted RBP	13.27	□□□□□ -0.29
EIF3E-216	ENST00000522887	MARVELD3	Q96A59	401 aa		13.25	□□□□□ -0.29
EIF3E-216	ENST00000522887	PDAP1	Q13442	181 aa	Known RBP	13.22	□□□□□ -0.29
EIF3E-216	ENST00000522887	C3orf67	Q6ZVT6	689 aa		13.2	□□□□□ -0.3
EIF3E-216	ENST00000522887	EMP3	P54852	163 aa		13.19	□□□□□ -0.3
EIF3E-216	ENST00000522887	DCAF8L2	P0C7V8	631 aa		13.18	□□□□□ -0.3
EIF3E-216	ENST00000522887	HS6ST3	Q8IZP7	471 aa		13.18	□□□□□ -0.3
EIF3E-216	ENST00000522887	DNAJC5	Q9H3Z4	198 aa		13.18	□□□□□ -0.3
EIF3E-216	ENST00000522887	GOLGA2	Q08379	1002 aa		13.16	□□□□□ -0.3
EIF3E-216	ENST00000522887	PCDHB8	Q9UN66	801 aa		13.14	□□□□□ -0.31
EIF3E-216	ENST00000522887	PSEN1	P49768	467 aa		13.12	□□□□□ -0.31
EIF3E-216	ENST00000522887	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.11	□□□□□ -0.31
EIF3E-216	ENST00000522887	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.1	□□□□□ -0.31
EIF3E-216	ENST00000522887	ZFP91	Q96JP5	570 aa	Predicted RBP	13.1	□□□□□ -0.31
EIF3E-216	ENST00000522887	STK25	O00506	426 aa		13.09	□□□□□ -0.31
EIF3E-216	ENST00000522887	CHGA	P10645	457 aa	Known RBP	13.09	□□□□□ -0.31
EIF3E-216	ENST00000522887	MKRN3	Q13064	507 aa	Known RBP	13.09	□□□□□ -0.31
EIF3E-216	ENST00000522887	BBX	Q8WY36	941 aa	Predicted RBP	13.08	□□□□□ -0.32
EIF3E-216	ENST00000522887	FAM205C	A6NFA0	338 aa		13.05	□□□□□ -0.32
EIF3E-216	ENST00000522887	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.05	□□□□□ -0.32
EIF3E-216	ENST00000522887	HS3ST6	Q96QI5	342 aa		13.04	□□□□□ -0.32
EIF3E-216	ENST00000522887	RYDEN	Q9NUL5	291 aa	Known RBP	13.04	□□□□□ -0.32
EIF3E-216	ENST00000522887	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.02	□□□□□ -0.33
EIF3E-216	ENST00000522887	STK24	Q9Y6E0	443 aa		13.01	□□□□□ -0.33
EIF3E-216	ENST00000522887		G3V3G9	751 aa		12.98	□□□□□ -0.33
EIF3E-216	ENST00000522887	PDCD7	Q8N8D1	485 aa	Known RBP	12.98	□□□□□ -0.33
EIF3E-216	ENST00000522887	ABCC9	O60706	1549 aa		12.98	□□□□□ -0.33
EIF3E-216	ENST00000522887	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
EIF3E-216	ENST00000522887	KRTAP3-3	Q9BYR6	98 aa		12.96	□□□□□ -0.33
EIF3E-216	ENST00000522887	KRTAP3-2	Q9BYR7	98 aa		12.96	□□□□□ -0.33
EIF3E-216	ENST00000522887	SOX12	O15370	315 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms