RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
PVT1-214ENST00000522875 RNF25Q96BH1 459 aaPredicted RBP14.47□□□□□ -0.09
PVT1-214ENST00000522875 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
PVT1-214ENST00000522875 PYGBP11216 843 aa14.43□□□□□ -0.1
PVT1-214ENST00000522875 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
PVT1-214ENST00000522875 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
PVT1-214ENST00000522875 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
PVT1-214ENST00000522875 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
PVT1-214ENST00000522875 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
PVT1-214ENST00000522875 PLCB2Q00722 1185 aa14.29□□□□□ -0.12
PVT1-214ENST00000522875 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
PVT1-214ENST00000522875 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
PVT1-214ENST00000522875 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
PVT1-214ENST00000522875 VGFO15240 615 aaPredicted RBP14.23□□□□□ -0.13
PVT1-214ENST00000522875 HS6ST3Q8IZP7 471 aa14.23□□□□□ -0.13
PVT1-214ENST00000522875 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
PVT1-214ENST00000522875 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
PVT1-214ENST00000522875 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
PVT1-214ENST00000522875 PCDHB8Q9UN66 801 aa14.2□□□□□ -0.14
PVT1-214ENST00000522875 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
PVT1-214ENST00000522875 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
PVT1-214ENST00000522875 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
PVT1-214ENST00000522875 STK25O00506 426 aa14.18□□□□□ -0.14
PVT1-214ENST00000522875 C19orf67A6NJJ6 358 aa14.17□□□□□ -0.14
PVT1-214ENST00000522875 MAP3K13O43283 966 aa14.17□□□□□ -0.14
PVT1-214ENST00000522875 ZNF467Q7Z7K2 595 aaPredicted RBP14.17□□□□□ -0.14
PVT1-214ENST00000522875 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
PVT1-214ENST00000522875 PAXIP1Q6ZW49 1069 aaPredicted RBP14.16□□□□□ -0.14
PVT1-214ENST00000522875 CFAP44Q96MT7 982 aa14.15□□□□□ -0.14
PVT1-214ENST00000522875 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
PVT1-214ENST00000522875 SGIP1Q9BQI5 828 aa14.15□□□□□ -0.14
PVT1-214ENST00000522875 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
PVT1-214ENST00000522875 BCL11BQ9C0K0 894 aaPredicted RBP14.13□□□□□ -0.15
PVT1-214ENST00000522875 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
PVT1-214ENST00000522875 STK24Q9Y6E0 443 aa14.12□□□□□ -0.15
PVT1-214ENST00000522875 HAP1P54257 671 aaPredicted RBP14.11□□□□□ -0.15
PVT1-214ENST00000522875 NKX1-1Q15270 411 aaPredicted RBP14.1□□□□□ -0.15
PVT1-214ENST00000522875 DNAJC5Q9H3Z4 198 aa14.1□□□□□ -0.15
PVT1-214ENST00000522875 SPRYD3Q8NCJ5 442 aa14.09□□□□□ -0.15
PVT1-214ENST00000522875 PDAP1Q13442 181 aaKnown RBP14.08□□□□□ -0.16
PVT1-214ENST00000522875 PSEN1P49768 467 aa14.05□□□□□ -0.16
PVT1-214ENST00000522875 HAX1O00165 279 aa14.04□□□□□ -0.16
PVT1-214ENST00000522875 EVX2Q03828 476 aa14.02□□□□□ -0.17
PVT1-214ENST00000522875 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
PVT1-214ENST00000522875 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
PVT1-214ENST00000522875 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
PVT1-214ENST00000522875 TSHZ2Q9NRE2 1034 aa13.93□□□□□ -0.18
PVT1-214ENST00000522875 CABP2Q9NPB3 220 aa13.9□□□□□ -0.18
PVT1-214ENST00000522875 POTEHQ6S545 545 aa13.89□□□□□ -0.19
PVT1-214ENST00000522875 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
PVT1-214ENST00000522875 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
PVT1-214ENST00000522875 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
PVT1-214ENST00000522875 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
PVT1-214ENST00000522875 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
PVT1-214ENST00000522875 KDM2AQ9Y2K7 1162 aa13.84□□□□□ -0.19
PVT1-214ENST00000522875 RYDENQ9NUL5 291 aaKnown RBP13.81□□□□□ -0.2
PVT1-214ENST00000522875 TTLL13PA6NNM8 815 aa13.78□□□□□ -0.2
PVT1-214ENST00000522875 TIE1P35590 1138 aa13.78□□□□□ -0.2
PVT1-214ENST00000522875 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
PVT1-214ENST00000522875 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
PVT1-214ENST00000522875 SOX12O15370 315 aa13.75□□□□□ -0.21
PVT1-214ENST00000522875 CLCN6P51797 869 aa13.75□□□□□ -0.21
PVT1-214ENST00000522875 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
PVT1-214ENST00000522875 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
PVT1-214ENST00000522875 NLRP6P59044 892 aa13.72□□□□□ -0.21
PVT1-214ENST00000522875 GABBR2O75899 941 aa13.71□□□□□ -0.21
PVT1-214ENST00000522875 PPP1R37O75864 691 aa13.7□□□□□ -0.22
PVT1-214ENST00000522875 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
PVT1-214ENST00000522875 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
PVT1-214ENST00000522875 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
PVT1-214ENST00000522875 ATN1P54259 1190 aaPredicted RBP13.66□□□□□ -0.22
PVT1-214ENST00000522875 ATMINO43313 823 aaPredicted RBP13.64□□□□□ -0.23
PVT1-214ENST00000522875 CADPS2Q86UW7 1296 aa13.63□□□□□ -0.23
PVT1-214ENST00000522875 ASTLQ6HA08 431 aaPredicted RBP13.62□□□□□ -0.23
PVT1-214ENST00000522875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■□□□ 14.5
PVT1-214ENST00000522875 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
PVT1-214ENST00000522875 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
PVT1-214ENST00000522875 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
PVT1-214ENST00000522875 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
PVT1-214ENST00000522875 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
PVT1-214ENST00000522875 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
PVT1-214ENST00000522875 IRX5P78411 483 aaPredicted RBP13.5□□□□□ -0.25
PVT1-214ENST00000522875 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
PVT1-214ENST00000522875 IER5LQ5T953 404 aa13.47□□□□□ -0.25
PVT1-214ENST00000522875 POTEIP0CG38 1075 aa13.46□□□□□ -0.25
PVT1-214ENST00000522875 BCANQ96GW7 911 aa13.45□□□□□ -0.26
PVT1-214ENST00000522875 OCEL1Q9H607 264 aa13.45□□□□□ -0.26
PVT1-214ENST00000522875 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
PVT1-214ENST00000522875 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
PVT1-214ENST00000522875 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
PVT1-214ENST00000522875 PLCG2P16885 1265 aa13.39□□□□□ -0.27
PVT1-214ENST00000522875 POTEFA5A3E0 1075 aa13.37□□□□□ -0.27
PVT1-214ENST00000522875 SEC24BO95487 1268 aa13.37□□□□□ -0.27
PVT1-214ENST00000522875 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
PVT1-214ENST00000522875 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
PVT1-214ENST00000522875 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
PVT1-214ENST00000522875 PDE4AP27815 886 aa13.35□□□□□ -0.27
PVT1-214ENST00000522875 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
PVT1-214ENST00000522875 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
PVT1-214ENST00000522875 C7P10643 843 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms