RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 GSE1Q14687 1217 aa10.9□□□□□ -0.66
SKP1-205ENST00000519054 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
SKP1-205ENST00000519054 PHF12Q96QT6 1004 aa10.87□□□□□ -0.67
SKP1-205ENST00000519054 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
SKP1-205ENST00000519054 PYGBP11216 843 aa10.83□□□□□ -0.68
SKP1-205ENST00000519054 SP7Q8TDD2 431 aaPredicted RBP10.81□□□□□ -0.68
SKP1-205ENST00000519054 PKD2Q13563 968 aa10.79□□□□□ -0.68
SKP1-205ENST00000519054 KIF12Q96FN5 646 aa10.78□□□□□ -0.68
SKP1-205ENST00000519054 MAP3K13O43283 966 aa10.76□□□□□ -0.69
SKP1-205ENST00000519054 GABBR2O75899 941 aa10.75□□□□□ -0.69
SKP1-205ENST00000519054 ECM2O94769 699 aaPredicted RBP10.74□□□□□ -0.69
SKP1-205ENST00000519054 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
SKP1-205ENST00000519054 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
SKP1-205ENST00000519054 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
SKP1-205ENST00000519054 MS4A3Q96HJ5 214 aa10.73□□□□□ -0.69
SKP1-205ENST00000519054 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
SKP1-205ENST00000519054 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
SKP1-205ENST00000519054 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
SKP1-205ENST00000519054 CLCN6P51797 869 aa10.71□□□□□ -0.69
SKP1-205ENST00000519054 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
SKP1-205ENST00000519054 SGIP1Q9BQI5 828 aa10.68□□□□□ -0.7
SKP1-205ENST00000519054 PCDHB8Q9UN66 801 aa10.68□□□□□ -0.7
SKP1-205ENST00000519054 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
SKP1-205ENST00000519054 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
SKP1-205ENST00000519054 RGL2O15211 777 aa10.64□□□□□ -0.71
SKP1-205ENST00000519054 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
SKP1-205ENST00000519054 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
SKP1-205ENST00000519054 DCBLD2Q96PD2 775 aa10.59□□□□□ -0.71
SKP1-205ENST00000519054 PSEN1P49768 467 aa10.56□□□□□ -0.72
SKP1-205ENST00000519054 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
SKP1-205ENST00000519054 TIE1P35590 1138 aa10.55□□□□□ -0.72
SKP1-205ENST00000519054 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
SKP1-205ENST00000519054 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
SKP1-205ENST00000519054 TMEM106CQ9BVX2 250 aa10.54□□□□□ -0.72
SKP1-205ENST00000519054 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
SKP1-205ENST00000519054 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
SKP1-205ENST00000519054 ATMINO43313 823 aaPredicted RBP10.52□□□□□ -0.73
SKP1-205ENST00000519054 POTEIP0CG38 1075 aa10.52□□□□□ -0.73
SKP1-205ENST00000519054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.51□□□□□ -0.73
SKP1-205ENST00000519054 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
SKP1-205ENST00000519054 ZFP91Q96JP5 570 aaPredicted RBP10.51□□□□□ -0.73
SKP1-205ENST00000519054 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
SKP1-205ENST00000519054 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
SKP1-205ENST00000519054 STK25O00506 426 aa10.46□□□□□ -0.73
SKP1-205ENST00000519054 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
SKP1-205ENST00000519054 TRIM35Q9UPQ4 493 aa10.46□□□□□ -0.73
SKP1-205ENST00000519054 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
SKP1-205ENST00000519054 CABP2Q9NPB3 220 aa10.44□□□□□ -0.74
SKP1-205ENST00000519054 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
SKP1-205ENST00000519054 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
SKP1-205ENST00000519054 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
SKP1-205ENST00000519054 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
SKP1-205ENST00000519054 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
SKP1-205ENST00000519054 SLC39A7Q92504 469 aa10.38□□□□□ -0.75
SKP1-205ENST00000519054 EFCAB3Q8N7B9 438 aa10.37□□□□□ -0.75
SKP1-205ENST00000519054 METRNQ9UJH8 293 aa10.36□□□□□ -0.75
SKP1-205ENST00000519054 C7P10643 843 aa10.35□□□□□ -0.75
SKP1-205ENST00000519054 IER5LQ5T953 404 aa10.34□□□□□ -0.75
SKP1-205ENST00000519054 SEC24BO95487 1268 aa10.32□□□□□ -0.76
SKP1-205ENST00000519054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.763e-9■■□□□ 13.9
SKP1-205ENST00000519054 COLQQ9Y215 455 aaPredicted RBP10.3□□□□□ -0.76
SKP1-205ENST00000519054 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
SKP1-205ENST00000519054 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
SKP1-205ENST00000519054 SOX12O15370 315 aa10.28□□□□□ -0.76
SKP1-205ENST00000519054 PLCG2P16885 1265 aa10.28□□□□□ -0.76
SKP1-205ENST00000519054 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
SKP1-205ENST00000519054 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
SKP1-205ENST00000519054 NKX1-1Q15270 411 aaPredicted RBP10.26□□□□□ -0.77
SKP1-205ENST00000519054 MFRPQ9BY79 579 aa10.26□□□□□ -0.77
SKP1-205ENST00000519054 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
SKP1-205ENST00000519054 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
SKP1-205ENST00000519054 NLRP6P59044 892 aa10.23□□□□□ -0.77
SKP1-205ENST00000519054 ILDR1Q86SU0 546 aaPredicted RBP10.23□□□□□ -0.77
SKP1-205ENST00000519054 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
SKP1-205ENST00000519054 BBXQ8WY36 941 aaPredicted RBP10.22□□□□□ -0.77
SKP1-205ENST00000519054 DPY19L2Q6NUT2 758 aa10.21□□□□□ -0.77
SKP1-205ENST00000519054 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
SKP1-205ENST00000519054 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
SKP1-205ENST00000519054 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.17□□□□□ -0.78
SKP1-205ENST00000519054 LHX8Q68G74 356 aa10.16□□□□□ -0.78
SKP1-205ENST00000519054 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
SKP1-205ENST00000519054 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
SKP1-205ENST00000519054 RYDENQ9NUL5 291 aaKnown RBP10.14□□□□□ -0.79
SKP1-205ENST00000519054 PPP1R37O75864 691 aa10.13□□□□□ -0.79
SKP1-205ENST00000519054 L3MBTL3Q96JM7 780 aaPredicted RBP10.13□□□□□ -0.79
SKP1-205ENST00000519054 G3V3G9 751 aa10.12□□□□□ -0.79
SKP1-205ENST00000519054 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
SKP1-205ENST00000519054 PAXIP1Q6ZW49 1069 aaPredicted RBP10.11□□□□□ -0.79
SKP1-205ENST00000519054 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
SKP1-205ENST00000519054 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
SKP1-205ENST00000519054 MICALL2Q8IY33 904 aa10.08□□□□□ -0.8
SKP1-205ENST00000519054 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
SKP1-205ENST00000519054 C3orf67Q6ZVT6 689 aa10.06□□□□□ -0.8
SKP1-205ENST00000519054 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
SKP1-205ENST00000519054 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
SKP1-205ENST00000519054 OTUD5Q96G74 571 aa10.04□□□□□ -0.8
SKP1-205ENST00000519054 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.03□□□□□ -0.8
SKP1-205ENST00000519054 PLCB2Q00722 1185 aa9.98□□□□□ -0.81
SKP1-205ENST00000519054 SLAIN1Q8ND83 568 aa9.98□□□□□ -0.81
SKP1-205ENST00000519054 TMEM92Q6UXU6 159 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms