RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
PABPC1-204ENST00000517990 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
PABPC1-204ENST00000517990 POTEGQ6S5H5 508 aa11.73□□□□□ -0.53
PABPC1-204ENST00000517990 TOP2AP11388 1531 aaKnown RBP11.72□□□□□ -0.53
PABPC1-204ENST00000517990 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.54
PABPC1-204ENST00000517990 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.54
PABPC1-204ENST00000517990 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.54
PABPC1-204ENST00000517990 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
PABPC1-204ENST00000517990 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
PABPC1-204ENST00000517990 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
PABPC1-204ENST00000517990 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-204ENST00000517990 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
PABPC1-204ENST00000517990 ABCC8Q09428 1581 aa11.64□□□□□ -0.55
PABPC1-204ENST00000517990 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-204ENST00000517990 CYB5RLQ6IPT4 315 aa11.62□□□□□ -0.55
PABPC1-204ENST00000517990 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
PABPC1-204ENST00000517990 OTUD5Q96G74 571 aa11.58□□□□□ -0.56
PABPC1-204ENST00000517990 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
PABPC1-204ENST00000517990 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
PABPC1-204ENST00000517990 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-204ENST00000517990 FBLN2P98095 1184 aa11.56□□□□□ -0.56
PABPC1-204ENST00000517990 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
PABPC1-204ENST00000517990 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
PABPC1-204ENST00000517990 CHD1O14646 1710 aa11.54□□□□□ -0.56
PABPC1-204ENST00000517990 DCBLD2Q96PD2 775 aa11.51□□□□□ -0.57
PABPC1-204ENST00000517990 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■■■ 32.8
PABPC1-204ENST00000517990 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
PABPC1-204ENST00000517990 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
PABPC1-204ENST00000517990 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
PABPC1-204ENST00000517990 POLA1P09884 1462 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-204ENST00000517990 CLCN6P51797 869 aa11.45□□□□□ -0.58
PABPC1-204ENST00000517990 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
PABPC1-204ENST00000517990 SOGA1O94964 1423 aa11.44□□□□□ -0.58
PABPC1-204ENST00000517990 CHADLQ6NUI6 762 aa11.44□□□□□ -0.58
PABPC1-204ENST00000517990 CHMP7Q8WUX9 453 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-204ENST00000517990 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
PABPC1-204ENST00000517990 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
PABPC1-204ENST00000517990 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
PABPC1-204ENST00000517990 RAD54L2Q9Y4B4 1467 aa11.41□□□□□ -0.58
PABPC1-204ENST00000517990 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-204ENST00000517990 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
PABPC1-204ENST00000517990 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
PABPC1-204ENST00000517990 ATF5Q9Y2D1 282 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-204ENST00000517990 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
PABPC1-204ENST00000517990 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
PABPC1-204ENST00000517990 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
PABPC1-204ENST00000517990 SPDYE2Q495Y8 402 aa11.37□□□□□ -0.59
PABPC1-204ENST00000517990 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
PABPC1-204ENST00000517990 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
PABPC1-204ENST00000517990 SYNJ2O15056 1496 aa11.36□□□□□ -0.59
PABPC1-204ENST00000517990 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
PABPC1-204ENST00000517990 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
PABPC1-204ENST00000517990 CUX1P39880 1505 aa11.3□□□□□ -0.6
PABPC1-204ENST00000517990 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
PABPC1-204ENST00000517990 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
PABPC1-204ENST00000517990 GRIN2AQ12879 1464 aa11.21□□□□□ -0.61
PABPC1-204ENST00000517990 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
PABPC1-204ENST00000517990 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-204ENST00000517990 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
PABPC1-204ENST00000517990 CEP170Q5SW79 1584 aa11.17□□□□□ -0.62
PABPC1-204ENST00000517990 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-204ENST00000517990 NUP160Q12769 1436 aa11.17□□□□□ -0.62
PABPC1-204ENST00000517990 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
PABPC1-204ENST00000517990 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
PABPC1-204ENST00000517990 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
PABPC1-204ENST00000517990 KCNA4P22459 653 aa11.15□□□□□ -0.62
PABPC1-204ENST00000517990 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-204ENST00000517990 ERCC6L2Q5T890 1561 aa11.14□□□□□ -0.63
PABPC1-204ENST00000517990 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
PABPC1-204ENST00000517990 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
PABPC1-204ENST00000517990 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
PABPC1-204ENST00000517990 KIF13AQ9H1H9 1805 aa11.1□□□□□ -0.63
PABPC1-204ENST00000517990 PRG4Q92954 1404 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-204ENST00000517990 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-204ENST00000517990 JPH4Q96JJ6 628 aa11.09□□□□□ -0.63
PABPC1-204ENST00000517990 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
PABPC1-204ENST00000517990 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
PABPC1-204ENST00000517990 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
PABPC1-204ENST00000517990 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
PABPC1-204ENST00000517990 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-204ENST00000517990 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
PABPC1-204ENST00000517990 ABCC10Q5T3U5 1492 aa11.06□□□□□ -0.64
PABPC1-204ENST00000517990 SUPT5HO00267 1087 aaKnown RBP11.05□□□□□ -0.64
PABPC1-204ENST00000517990 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
PABPC1-204ENST00000517990 MAPKBP1O60336 1514 aa11.04□□□□□ -0.64
PABPC1-204ENST00000517990 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
PABPC1-204ENST00000517990 KDM6BO15054 1643 aa11.01□□□□□ -0.65
PABPC1-204ENST00000517990 RUSC2Q8N2Y8 1516 aa11□□□□□ -0.65
PABPC1-204ENST00000517990 DIP2BQ9P265 1576 aa11□□□□□ -0.65
PABPC1-204ENST00000517990 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
PABPC1-204ENST00000517990 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
PABPC1-204ENST00000517990 ADCY10Q96PN6 1610 aa10.97□□□□□ -0.65
PABPC1-204ENST00000517990 TSPOAP1O95153 1857 aa10.95□□□□□ -0.66
PABPC1-204ENST00000517990 KIAA0586Q9BVV6 1533 aa10.95□□□□□ -0.66
PABPC1-204ENST00000517990 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
PABPC1-204ENST00000517990 CUL7Q14999 1698 aa10.92□□□□□ -0.66
PABPC1-204ENST00000517990 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
PABPC1-204ENST00000517990 PTPRGP23470 1445 aa10.92□□□□□ -0.66
PABPC1-204ENST00000517990 CARMIL2Q6F5E8 1435 aa10.92□□□□□ -0.66
PABPC1-204ENST00000517990 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms