RNA–Protein interactions for RNA: ENST00000517852.5

MDM2-221, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-221ENST00000517852 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
MDM2-221ENST00000517852 CLCN6P51797 869 aa8.79□□□□□ -1
MDM2-221ENST00000517852 TRPC6Q9Y210 931 aa8.79□□□□□ -1
MDM2-221ENST00000517852 MAP3K13O43283 966 aa8.77□□□□□ -1.01
MDM2-221ENST00000517852 NUBP1P53384 320 aa8.77□□□□□ -1.01
MDM2-221ENST00000517852 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
MDM2-221ENST00000517852 POTEB2H3BUK9 544 aa8.73□□□□□ -1.01
MDM2-221ENST00000517852 ATMINO43313 823 aaPredicted RBP8.72□□□□□ -1.01
MDM2-221ENST00000517852 ATN1P54259 1190 aaPredicted RBP8.7□□□□□ -1.02
MDM2-221ENST00000517852 FBXO3Q9UK99 471 aa8.7□□□□□ -1.02
MDM2-221ENST00000517852 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
MDM2-221ENST00000517852 ASTLQ6HA08 431 aaPredicted RBP8.68□□□□□ -1.02
MDM2-221ENST00000517852 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
MDM2-221ENST00000517852 ZBTB47Q9UFB7 747 aaPredicted RBP8.68□□□□□ -1.02
MDM2-221ENST00000517852 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
MDM2-221ENST00000517852 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
MDM2-221ENST00000517852 METRNQ9UJH8 293 aa8.66□□□□□ -1.02
MDM2-221ENST00000517852 PCDHB13Q9Y5F0 798 aa8.66□□□□□ -1.02
MDM2-221ENST00000517852 PYGBP11216 843 aa8.65□□□□□ -1.02
MDM2-221ENST00000517852 FAM212AQ96EL1 285 aa8.65□□□□□ -1.02
MDM2-221ENST00000517852 IFNL1Q8IU54 200 aa8.64□□□□□ -1.03
MDM2-221ENST00000517852 POTEJP0CG39 1038 aa8.62□□□□□ -1.03
MDM2-221ENST00000517852 OTUD5Q96G74 571 aa8.62□□□□□ -1.03
MDM2-221ENST00000517852 TTLL13PA6NNM8 815 aa8.61□□□□□ -1.03
MDM2-221ENST00000517852 POTEFA5A3E0 1075 aa8.6□□□□□ -1.03
MDM2-221ENST00000517852 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
MDM2-221ENST00000517852 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
MDM2-221ENST00000517852 PCDHB8Q9UN66 801 aa8.59□□□□□ -1.03
MDM2-221ENST00000517852 TIE1P35590 1138 aa8.57□□□□□ -1.04
MDM2-221ENST00000517852 C7P10643 843 aa8.56□□□□□ -1.04
MDM2-221ENST00000517852 TRIM35Q9UPQ4 493 aa8.56□□□□□ -1.04
MDM2-221ENST00000517852 COLQQ9Y215 455 aaPredicted RBP8.56□□□□□ -1.04
MDM2-221ENST00000517852 TMEM106CQ9BVX2 250 aa8.55□□□□□ -1.04
MDM2-221ENST00000517852 SGIP1Q9BQI5 828 aa8.52□□□□□ -1.05
MDM2-221ENST00000517852 CIZ1Q9ULV3 898 aaPredicted RBP8.51□□□□□ -1.05
MDM2-221ENST00000517852 SEC24BO95487 1268 aa8.49□□□□□ -1.05
MDM2-221ENST00000517852 SPOCK2Q92563 424 aa8.49□□□□□ -1.05
MDM2-221ENST00000517852 GSE1Q14687 1217 aa8.48□□□□□ -1.05
MDM2-221ENST00000517852 PLSCR2Q9NRY7 297 aa8.43□□□□□ -1.06
MDM2-221ENST00000517852 IRX5P78411 483 aaPredicted RBP8.4□□□□□ -1.06
MDM2-221ENST00000517852 PLCG2P16885 1265 aa8.39□□□□□ -1.07
MDM2-221ENST00000517852 PSEN1P49768 467 aa8.39□□□□□ -1.07
MDM2-221ENST00000517852 IER5LQ5T953 404 aa8.39□□□□□ -1.07
MDM2-221ENST00000517852 SCUBE2Q9NQ36 999 aa8.39□□□□□ -1.07
MDM2-221ENST00000517852 CHRM1P11229 460 aaPredicted RBP8.38□□□□□ -1.07
MDM2-221ENST00000517852 ZNF467Q7Z7K2 595 aaPredicted RBP8.38□□□□□ -1.07
MDM2-221ENST00000517852 MAMSTRQ6ZN01 415 aa8.37□□□□□ -1.07
MDM2-221ENST00000517852 FAM163AQ96GL9 167 aaPredicted RBP8.37□□□□□ -1.07
MDM2-221ENST00000517852 LCE2DQ5TA82 110 aaPredicted RBP8.35□□□□□ -1.07
MDM2-221ENST00000517852 POTEMA6NI47 508 aa8.33□□□□□ -1.08
MDM2-221ENST00000517852 OCEL1Q9H607 264 aa8.33□□□□□ -1.08
MDM2-221ENST00000517852 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
MDM2-221ENST00000517852 GOLGA2Q08379 1002 aa8.32□□□□□ -1.08
MDM2-221ENST00000517852 POTEGQ6S5H5 508 aa8.32□□□□□ -1.08
MDM2-221ENST00000517852 SLAIN1Q8ND83 568 aa8.32□□□□□ -1.08
MDM2-221ENST00000517852 MKRN3Q13064 507 aaKnown RBP8.31□□□□□ -1.08
MDM2-221ENST00000517852 PDAP1Q13442 181 aaKnown RBP8.31□□□□□ -1.08
MDM2-221ENST00000517852 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
MDM2-221ENST00000517852 PDCD7Q8N8D1 485 aaKnown RBP8.31□□□□□ -1.08
MDM2-221ENST00000517852 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
MDM2-221ENST00000517852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.29□□□□□ -1.086e-12■■□□□ 11.5
MDM2-221ENST00000517852 EFCAB3Q8N7B9 438 aa8.24□□□□□ -1.09
MDM2-221ENST00000517852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.22□□□□□ -1.09
MDM2-221ENST00000517852 ZFP91Q96JP5 570 aaPredicted RBP8.22□□□□□ -1.09
MDM2-221ENST00000517852 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.22□□□□□ -1.09
MDM2-221ENST00000517852 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
MDM2-221ENST00000517852 ST18O60284 1047 aa8.2□□□□□ -1.1
MDM2-221ENST00000517852 C3orf67Q6ZVT6 689 aa8.18□□□□□ -1.1
MDM2-221ENST00000517852 ILDR1Q86SU0 546 aaPredicted RBP8.18□□□□□ -1.1
MDM2-221ENST00000517852 TRIM41Q8WV44 630 aa8.18□□□□□ -1.1
MDM2-221ENST00000517852 L3MBTL3Q96JM7 780 aaPredicted RBP8.16□□□□□ -1.1
MDM2-221ENST00000517852 ECM2O94769 699 aaPredicted RBP8.15□□□□□ -1.1
MDM2-221ENST00000517852 PKD2Q13563 968 aa8.15□□□□□ -1.1
MDM2-221ENST00000517852 PHF8Q9UPP1 1060 aa8.15□□□□□ -1.1
MDM2-221ENST00000517852 VGFO15240 615 aaPredicted RBP8.14□□□□□ -1.11
MDM2-221ENST00000517852 MARVELD3Q96A59 401 aa8.14□□□□□ -1.11
MDM2-221ENST00000517852 BOLA1Q9Y3E2 137 aa8.14□□□□□ -1.11
MDM2-221ENST00000517852 RGL2O15211 777 aa8.13□□□□□ -1.11
MDM2-221ENST00000517852 MS4A4AQ96JQ5 239 aa8.13□□□□□ -1.11
MDM2-221ENST00000517852 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
MDM2-221ENST00000517852 STK24Q9Y6E0 443 aa8.11□□□□□ -1.11
MDM2-221ENST00000517852 G3V3G9 751 aa8.1□□□□□ -1.11
MDM2-221ENST00000517852 CDAN1Q8IWY9 1227 aa8.09□□□□□ -1.11
MDM2-221ENST00000517852 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
MDM2-221ENST00000517852 STK25O00506 426 aa8.07□□□□□ -1.12
MDM2-221ENST00000517852 MICALL2Q8IY33 904 aa8.06□□□□□ -1.12
MDM2-221ENST00000517852 SOX12O15370 315 aa8.05□□□□□ -1.12
MDM2-221ENST00000517852 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
MDM2-221ENST00000517852 SNPHO15079 494 aa8.04□□□□□ -1.12
MDM2-221ENST00000517852 MFRPQ9BY79 579 aa8.04□□□□□ -1.12
MDM2-221ENST00000517852 POTEB3A0JP26 581 aa8.03□□□□□ -1.12
MDM2-221ENST00000517852 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
MDM2-221ENST00000517852 POTEBQ6S5H4 581 aa8.03□□□□□ -1.12
MDM2-221ENST00000517852 FBXO22Q8NEZ5 403 aa8.03□□□□□ -1.12
MDM2-221ENST00000517852 EMP3P54852 163 aa8.01□□□□□ -1.13
MDM2-221ENST00000517852 PCDH10Q9P2E7 1040 aa8.01□□□□□ -1.13
MDM2-221ENST00000517852 FAM205CA6NFA0 338 aa8□□□□□ -1.13
MDM2-221ENST00000517852 NLRP6P59044 892 aa7.99□□□□□ -1.13
MDM2-221ENST00000517852 HS3ST6Q96QI5 342 aa7.97□□□□□ -1.13
MDM2-221ENST00000517852 PPP1R37O75864 691 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms