RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
RNU6-1028P-201ENST00000517164 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
RNU6-1028P-201ENST00000517164 PYGBP11216 843 aa12.07□□□□□ -0.48
RNU6-1028P-201ENST00000517164 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
RNU6-1028P-201ENST00000517164 SLC24A1O60721 1099 aa12.02□□□□□ -0.49
RNU6-1028P-201ENST00000517164 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
RNU6-1028P-201ENST00000517164 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
RNU6-1028P-201ENST00000517164 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
RNU6-1028P-201ENST00000517164 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
RNU6-1028P-201ENST00000517164 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
RNU6-1028P-201ENST00000517164 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
RNU6-1028P-201ENST00000517164 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
RNU6-1028P-201ENST00000517164 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
RNU6-1028P-201ENST00000517164 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
RNU6-1028P-201ENST00000517164 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
RNU6-1028P-201ENST00000517164 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
RNU6-1028P-201ENST00000517164 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
RNU6-1028P-201ENST00000517164 ZNF467Q7Z7K2 595 aaPredicted RBP11.88□□□□□ -0.51
RNU6-1028P-201ENST00000517164 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
RNU6-1028P-201ENST00000517164 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
RNU6-1028P-201ENST00000517164 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
RNU6-1028P-201ENST00000517164 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
RNU6-1028P-201ENST00000517164 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
RNU6-1028P-201ENST00000517164 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
RNU6-1028P-201ENST00000517164 STK25O00506 426 aa11.86□□□□□ -0.51
RNU6-1028P-201ENST00000517164 MAP3K13O43283 966 aa11.86□□□□□ -0.51
RNU6-1028P-201ENST00000517164 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
RNU6-1028P-201ENST00000517164 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
RNU6-1028P-201ENST00000517164 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
RNU6-1028P-201ENST00000517164 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
RNU6-1028P-201ENST00000517164 BCL11BQ9C0K0 894 aaPredicted RBP11.83□□□□□ -0.52
RNU6-1028P-201ENST00000517164 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
RNU6-1028P-201ENST00000517164 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
RNU6-1028P-201ENST00000517164 CFAP44Q96MT7 982 aa11.8□□□□□ -0.52
RNU6-1028P-201ENST00000517164 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
RNU6-1028P-201ENST00000517164 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
RNU6-1028P-201ENST00000517164 HAX1O00165 279 aa11.78□□□□□ -0.52
RNU6-1028P-201ENST00000517164 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
RNU6-1028P-201ENST00000517164 HAP1P54257 671 aaPredicted RBP11.77□□□□□ -0.53
RNU6-1028P-201ENST00000517164 PSEN1P49768 467 aa11.76□□□□□ -0.53
RNU6-1028P-201ENST00000517164 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
RNU6-1028P-201ENST00000517164 EVX2Q03828 476 aa11.73□□□□□ -0.53
RNU6-1028P-201ENST00000517164 MS4A3Q96HJ5 214 aa11.71□□□□□ -0.53
RNU6-1028P-201ENST00000517164 POTEHQ6S545 545 aa11.68□□□□□ -0.54
RNU6-1028P-201ENST00000517164 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
RNU6-1028P-201ENST00000517164 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
RNU6-1028P-201ENST00000517164 CABP2Q9NPB3 220 aa11.63□□□□□ -0.55
RNU6-1028P-201ENST00000517164 GALR2O43603 387 aaPredicted RBP11.62□□□□□ -0.55
RNU6-1028P-201ENST00000517164 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
RNU6-1028P-201ENST00000517164 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
RNU6-1028P-201ENST00000517164 EFCAB3Q8N7B9 438 aa11.6□□□□□ -0.55
RNU6-1028P-201ENST00000517164 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
RNU6-1028P-201ENST00000517164 RYDENQ9NUL5 291 aaKnown RBP11.57□□□□□ -0.56
RNU6-1028P-201ENST00000517164 TIE1P35590 1138 aa11.56□□□□□ -0.56
RNU6-1028P-201ENST00000517164 CLCN6P51797 869 aa11.55□□□□□ -0.56
RNU6-1028P-201ENST00000517164 VSIG10Q8N0Z9 540 aa11.55□□□□□ -0.56
RNU6-1028P-201ENST00000517164 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
RNU6-1028P-201ENST00000517164 TTLL13PA6NNM8 815 aa11.54□□□□□ -0.56
RNU6-1028P-201ENST00000517164 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
RNU6-1028P-201ENST00000517164 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.57
RNU6-1028P-201ENST00000517164 SOX12O15370 315 aa11.51□□□□□ -0.57
RNU6-1028P-201ENST00000517164 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
RNU6-1028P-201ENST00000517164 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
RNU6-1028P-201ENST00000517164 GABBR2O75899 941 aa11.49□□□□□ -0.57
RNU6-1028P-201ENST00000517164 NLRP6P59044 892 aa11.48□□□□□ -0.57
RNU6-1028P-201ENST00000517164 TRIM35Q9UPQ4 493 aa11.47□□□□□ -0.57
RNU6-1028P-201ENST00000517164 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
RNU6-1028P-201ENST00000517164 PPP1R37O75864 691 aa11.45□□□□□ -0.58
RNU6-1028P-201ENST00000517164 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
RNU6-1028P-201ENST00000517164 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
RNU6-1028P-201ENST00000517164 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
RNU6-1028P-201ENST00000517164 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
RNU6-1028P-201ENST00000517164 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
RNU6-1028P-201ENST00000517164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.59
RNU6-1028P-201ENST00000517164 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
RNU6-1028P-201ENST00000517164 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
RNU6-1028P-201ENST00000517164 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
RNU6-1028P-201ENST00000517164 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
RNU6-1028P-201ENST00000517164 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
RNU6-1028P-201ENST00000517164 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
RNU6-1028P-201ENST00000517164 IER5LQ5T953 404 aa11.3□□□□□ -0.6
RNU6-1028P-201ENST00000517164 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
RNU6-1028P-201ENST00000517164 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
RNU6-1028P-201ENST00000517164 OCEL1Q9H607 264 aa11.27□□□□□ -0.61
RNU6-1028P-201ENST00000517164 PLCG2P16885 1265 aa11.23□□□□□ -0.61
RNU6-1028P-201ENST00000517164 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
RNU6-1028P-201ENST00000517164 BCANQ96GW7 911 aa11.22□□□□□ -0.61
RNU6-1028P-201ENST00000517164 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
RNU6-1028P-201ENST00000517164 SEC24BO95487 1268 aa11.21□□□□□ -0.61
RNU6-1028P-201ENST00000517164 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
RNU6-1028P-201ENST00000517164 WDR70Q9NW82 654 aa11.21□□□□□ -0.61
RNU6-1028P-201ENST00000517164 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
RNU6-1028P-201ENST00000517164 POTEFA5A3E0 1075 aa11.19□□□□□ -0.62
RNU6-1028P-201ENST00000517164 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
RNU6-1028P-201ENST00000517164 C7P10643 843 aa11.18□□□□□ -0.62
RNU6-1028P-201ENST00000517164 CRISPLD2Q9H0B8 497 aa11.18□□□□□ -0.62
RNU6-1028P-201ENST00000517164 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
RNU6-1028P-201ENST00000517164 PDE4AP27815 886 aa11.16□□□□□ -0.62
RNU6-1028P-201ENST00000517164 LARP6Q9BRS8 491 aaKnown RBP11.16□□□□□ -0.62
RNU6-1028P-201ENST00000517164 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms