RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 CDAN1Q8IWY9 1227 aa2.34□□□□□ -2.03
SCARNA16.5-201ENST00000517114 PELP1Q8IZL8 1130 aaKnown RBP2.34□□□□□ -2.03
SCARNA16.5-201ENST00000517114 MS4A3Q96HJ5 214 aa2.34□□□□□ -2.03
SCARNA16.5-201ENST00000517114 CLCN6P51797 869 aa2.33□□□□□ -2.04
SCARNA16.5-201ENST00000517114 TSPYL2Q9H2G4 693 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.5-201ENST00000517114 TRPC6Q9Y210 931 aa2.32□□□□□ -2.04
SCARNA16.5-201ENST00000517114 ATMINO43313 823 aaPredicted RBP2.31□□□□□ -2.04
SCARNA16.5-201ENST00000517114 SPNS2Q8IVW8 549 aa2.31□□□□□ -2.04
SCARNA16.5-201ENST00000517114 RASEFQ8IZ41 740 aa2.31□□□□□ -2.04
SCARNA16.5-201ENST00000517114 METRNQ9UJH8 293 aa2.31□□□□□ -2.04
SCARNA16.5-201ENST00000517114 CCDC61Q9Y6R9 512 aa2.31□□□□□ -2.04
SCARNA16.5-201ENST00000517114 POTEJP0CG39 1038 aa2.3□□□□□ -2.04
SCARNA16.5-201ENST00000517114 ASTLQ6HA08 431 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.5-201ENST00000517114 MIER1Q8N108 512 aa2.3□□□□□ -2.04
SCARNA16.5-201ENST00000517114 FAM163AQ96GL9 167 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.5-201ENST00000517114 MAP3K13O43283 966 aa2.29□□□□□ -2.04
SCARNA16.5-201ENST00000517114 ATN1P54259 1190 aaPredicted RBP2.29□□□□□ -2.04
SCARNA16.5-201ENST00000517114 PLCD3Q8N3E9 789 aa2.29□□□□□ -2.04
SCARNA16.5-201ENST00000517114 SLC39A7Q92504 469 aa2.29□□□□□ -2.04
SCARNA16.5-201ENST00000517114 KIF12Q96FN5 646 aa2.29□□□□□ -2.04
SCARNA16.5-201ENST00000517114 BMP2KQ9NSY1 1161 aaPredicted RBP2.29□□□□□ -2.04
SCARNA16.5-201ENST00000517114 POTEFA5A3E0 1075 aa2.28□□□□□ -2.04
SCARNA16.5-201ENST00000517114 FKBP8Q14318 412 aa2.28□□□□□ -2.04
SCARNA16.5-201ENST00000517114 PLEKHG5O94827 1062 aa2.27□□□□□ -2.05
SCARNA16.5-201ENST00000517114 C7P10643 843 aa2.27□□□□□ -2.05
SCARNA16.5-201ENST00000517114 COLQQ9Y215 455 aaPredicted RBP2.27□□□□□ -2.05
SCARNA16.5-201ENST00000517114 TTLL13PA6NNM8 815 aa2.26□□□□□ -2.05
SCARNA16.5-201ENST00000517114 TIE1P35590 1138 aa2.26□□□□□ -2.05
SCARNA16.5-201ENST00000517114 NUBP1P53384 320 aa2.26□□□□□ -2.05
SCARNA16.5-201ENST00000517114 PCDHB13Q9Y5F0 798 aa2.26□□□□□ -2.05
SCARNA16.5-201ENST00000517114 IFNL1Q8IU54 200 aa2.25□□□□□ -2.05
SCARNA16.5-201ENST00000517114 FAM212AQ96EL1 285 aa2.25□□□□□ -2.05
SCARNA16.5-201ENST00000517114 SCUBE2Q9NQ36 999 aa2.25□□□□□ -2.05
SCARNA16.5-201ENST00000517114 TRIM35Q9UPQ4 493 aa2.25□□□□□ -2.05
SCARNA16.5-201ENST00000517114 SEC24BO95487 1268 aa2.24□□□□□ -2.05
SCARNA16.5-201ENST00000517114 MAMSTRQ6ZN01 415 aa2.24□□□□□ -2.05
SCARNA16.5-201ENST00000517114 TMEM106CQ9BVX2 250 aa2.24□□□□□ -2.05
SCARNA16.5-201ENST00000517114 ZBTB47Q9UFB7 747 aaPredicted RBP2.24□□□□□ -2.05
SCARNA16.5-201ENST00000517114 PYGBP11216 843 aa2.23□□□□□ -2.05
SCARNA16.5-201ENST00000517114 PCDHB8Q9UN66 801 aa2.23□□□□□ -2.05
SCARNA16.5-201ENST00000517114 PLCG2P16885 1265 aa2.22□□□□□ -2.05
SCARNA16.5-201ENST00000517114 VASPP50552 380 aaPredicted RBP2.22□□□□□ -2.05
SCARNA16.5-201ENST00000517114 IER5LQ5T953 404 aa2.22□□□□□ -2.05
SCARNA16.5-201ENST00000517114 DCAF8Q5TAQ9 597 aa2.22□□□□□ -2.05
SCARNA16.5-201ENST00000517114 SGIP1Q9BQI5 828 aa2.22□□□□□ -2.05
SCARNA16.5-201ENST00000517114 IRX5P78411 483 aaPredicted RBP2.21□□□□□ -2.06
SCARNA16.5-201ENST00000517114 KLHL34Q8N239 644 aa2.21□□□□□ -2.06
SCARNA16.5-201ENST00000517114 SLAIN1Q8ND83 568 aa2.21□□□□□ -2.06
SCARNA16.5-201ENST00000517114 FBXO3Q9UK99 471 aa2.2□□□□□ -2.06
SCARNA16.5-201ENST00000517114 ST18O60284 1047 aa2.19□□□□□ -2.06
SCARNA16.5-201ENST00000517114 PDCD7Q8N8D1 485 aaKnown RBP2.19□□□□□ -2.06
SCARNA16.5-201ENST00000517114 ZNF467Q7Z7K2 595 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.5-201ENST00000517114 MARVELD3Q96A59 401 aa2.18□□□□□ -2.06
SCARNA16.5-201ENST00000517114 OCEL1Q9H607 264 aa2.18□□□□□ -2.06
SCARNA16.5-201ENST00000517114 LOC100996750A0A140TA64 210 aa2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 PSEN1P49768 467 aa2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 GOLGA2Q08379 1002 aa2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 GSE1Q14687 1217 aa2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 IFNLR1Q8IU57 520 aaPredicted RBP2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 CIZ1Q9ULV3 898 aaPredicted RBP2.17□□□□□ -2.06
SCARNA16.5-201ENST00000517114 MKRN3Q13064 507 aaKnown RBP2.16□□□□□ -2.06
SCARNA16.5-201ENST00000517114 PDAP1Q13442 181 aaKnown RBP2.16□□□□□ -2.06
SCARNA16.5-201ENST00000517114 DPY19L2Q6NUT2 758 aa2.16□□□□□ -2.06
SCARNA16.5-201ENST00000517114 C3orf67Q6ZVT6 689 aa2.16□□□□□ -2.06
SCARNA16.5-201ENST00000517114 SPOCK2Q92563 424 aa2.16□□□□□ -2.06
SCARNA16.5-201ENST00000517114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.16□□□□□ -2.06
SCARNA16.5-201ENST00000517114 CHRM1P11229 460 aaPredicted RBP2.15□□□□□ -2.07
SCARNA16.5-201ENST00000517114 CABP2Q9NPB3 220 aa2.15□□□□□ -2.07
SCARNA16.5-201ENST00000517114 SNPHO15079 494 aa2.14□□□□□ -2.07
SCARNA16.5-201ENST00000517114 EMP3P54852 163 aa2.14□□□□□ -2.07
SCARNA16.5-201ENST00000517114 L3MBTL3Q96JM7 780 aaPredicted RBP2.14□□□□□ -2.07
SCARNA16.5-201ENST00000517114 TMEM121BQ9BXQ6 578 aaPredicted RBP2.14□□□□□ -2.07
SCARNA16.5-201ENST00000517114 POTEB3A0JP26 581 aa2.13□□□□□ -2.07
SCARNA16.5-201ENST00000517114 FAM205CA6NFA0 338 aa2.13□□□□□ -2.07
SCARNA16.5-201ENST00000517114 HOXB3P14651 431 aaPredicted RBP2.13□□□□□ -2.07
SCARNA16.5-201ENST00000517114 POTEBQ6S5H4 581 aa2.13□□□□□ -2.07
SCARNA16.5-201ENST00000517114 ILDR1Q86SU0 546 aaPredicted RBP2.13□□□□□ -2.07
SCARNA16.5-201ENST00000517114 RNF25Q96BH1 459 aaPredicted RBP2.13□□□□□ -2.07
SCARNA16.5-201ENST00000517114 BOLA1Q9Y3E2 137 aa2.13□□□□□ -2.07
SCARNA16.5-201ENST00000517114 G3V3G9 751 aa2.12□□□□□ -2.07
SCARNA16.5-201ENST00000517114 EFCAB3Q8N7B9 438 aa2.12□□□□□ -2.07
SCARNA16.5-201ENST00000517114 HS3ST6Q96QI5 342 aa2.12□□□□□ -2.07
SCARNA16.5-201ENST00000517114 KRTAP3-3Q9BYR6 98 aa2.12□□□□□ -2.07
SCARNA16.5-201ENST00000517114 KRTAP3-2Q9BYR7 98 aa2.12□□□□□ -2.07
SCARNA16.5-201ENST00000517114 TMEM92Q6UXU6 159 aa2.11□□□□□ -2.07
SCARNA16.5-201ENST00000517114 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.1□□□□□ -2.07
SCARNA16.5-201ENST00000517114 RIOK3O14730 519 aaKnown RBP2.1□□□□□ -2.07
SCARNA16.5-201ENST00000517114 MICALL2Q8IY33 904 aa2.1□□□□□ -2.07
SCARNA16.5-201ENST00000517114 ZFP91Q96JP5 570 aaPredicted RBP2.1□□□□□ -2.07
SCARNA16.5-201ENST00000517114 MS4A4AQ96JQ5 239 aa2.1□□□□□ -2.07
SCARNA16.5-201ENST00000517114 PHF8Q9UPP1 1060 aa2.1□□□□□ -2.07
SCARNA16.5-201ENST00000517114 DOK7Q18PE1 504 aa2.09□□□□□ -2.07
SCARNA16.5-201ENST00000517114 VARS2Q5ST30 1063 aaKnown RBP2.09□□□□□ -2.07
SCARNA16.5-201ENST00000517114 ZNF710Q8N1W2 664 aa2.09□□□□□ -2.07
SCARNA16.5-201ENST00000517114 TRIM41Q8WV44 630 aa2.09□□□□□ -2.07
SCARNA16.5-201ENST00000517114 ERBB3P21860 1342 aa2.09□□□□□ -2.08
SCARNA16.5-201ENST00000517114 VGFO15240 615 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.5-201ENST00000517114 HOXB1P14653 301 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms