RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 KIF12Q96FN5 646 aa8.81□□□□□ -1
SNORA40.15-201ENST00000516884 TSPYL2Q9H2G4 693 aaPredicted RBP8.81□□□□□ -1
SNORA40.15-201ENST00000516884 PLEKHG5O94827 1062 aa8.8□□□□□ -1
SNORA40.15-201ENST00000516884 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
SNORA40.15-201ENST00000516884 POTEB2H3BUK9 544 aa8.78□□□□□ -1
SNORA40.15-201ENST00000516884 NUBP1P53384 320 aa8.76□□□□□ -1.01
SNORA40.15-201ENST00000516884 PLCD3Q8N3E9 789 aa8.75□□□□□ -1.01
SNORA40.15-201ENST00000516884 OTUD5Q96G74 571 aa8.74□□□□□ -1.01
SNORA40.15-201ENST00000516884 ZBTB47Q9UFB7 747 aaPredicted RBP8.74□□□□□ -1.01
SNORA40.15-201ENST00000516884 SLC39A7Q92504 469 aa8.73□□□□□ -1.01
SNORA40.15-201ENST00000516884 MAP3K13O43283 966 aa8.72□□□□□ -1.01
SNORA40.15-201ENST00000516884 C7P10643 843 aa8.72□□□□□ -1.01
SNORA40.15-201ENST00000516884 SGIP1Q9BQI5 828 aa8.71□□□□□ -1.02
SNORA40.15-201ENST00000516884 METRNQ9UJH8 293 aa8.71□□□□□ -1.02
SNORA40.15-201ENST00000516884 TIE1P35590 1138 aa8.7□□□□□ -1.02
SNORA40.15-201ENST00000516884 ATN1P54259 1190 aaPredicted RBP8.7□□□□□ -1.02
SNORA40.15-201ENST00000516884 BMP2KQ9NSY1 1161 aaPredicted RBP8.7□□□□□ -1.02
SNORA40.15-201ENST00000516884 TRPC6Q9Y210 931 aa8.7□□□□□ -1.02
SNORA40.15-201ENST00000516884 POTEJP0CG39 1038 aa8.67□□□□□ -1.02
SNORA40.15-201ENST00000516884 FBXO3Q9UK99 471 aa8.66□□□□□ -1.02
SNORA40.15-201ENST00000516884 POTEFA5A3E0 1075 aa8.64□□□□□ -1.03
SNORA40.15-201ENST00000516884 TTLL13PA6NNM8 815 aa8.63□□□□□ -1.03
SNORA40.15-201ENST00000516884 FAM212AQ96EL1 285 aa8.63□□□□□ -1.03
SNORA40.15-201ENST00000516884 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
SNORA40.15-201ENST00000516884 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
SNORA40.15-201ENST00000516884 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
SNORA40.15-201ENST00000516884 IER5LQ5T953 404 aa8.58□□□□□ -1.04
SNORA40.15-201ENST00000516884 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
SNORA40.15-201ENST00000516884 COLQQ9Y215 455 aaPredicted RBP8.56□□□□□ -1.04
SNORA40.15-201ENST00000516884 TRIM35Q9UPQ4 493 aa8.55□□□□□ -1.04
SNORA40.15-201ENST00000516884 DCAF8Q5TAQ9 597 aa8.51□□□□□ -1.05
SNORA40.15-201ENST00000516884 TMEM106CQ9BVX2 250 aa8.51□□□□□ -1.05
SNORA40.15-201ENST00000516884 SCUBE2Q9NQ36 999 aa8.51□□□□□ -1.05
SNORA40.15-201ENST00000516884 PYGBP11216 843 aa8.49□□□□□ -1.05
SNORA40.15-201ENST00000516884 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
SNORA40.15-201ENST00000516884 CHRM1P11229 460 aaPredicted RBP8.48□□□□□ -1.05
SNORA40.15-201ENST00000516884 SEC24BO95487 1268 aa8.47□□□□□ -1.05
SNORA40.15-201ENST00000516884 IRX5P78411 483 aaPredicted RBP8.47□□□□□ -1.05
SNORA40.15-201ENST00000516884 GSE1Q14687 1217 aa8.47□□□□□ -1.05
SNORA40.15-201ENST00000516884 POTEMA6NI47 508 aa8.45□□□□□ -1.06
SNORA40.15-201ENST00000516884 PCDHB8Q9UN66 801 aa8.45□□□□□ -1.06
SNORA40.15-201ENST00000516884 IFNLR1Q8IU57 520 aaPredicted RBP8.44□□□□□ -1.06
SNORA40.15-201ENST00000516884 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
SNORA40.15-201ENST00000516884 POTEGQ6S5H5 508 aa8.43□□□□□ -1.06
SNORA40.15-201ENST00000516884 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
SNORA40.15-201ENST00000516884 PLCG2P16885 1265 aa8.4□□□□□ -1.06
SNORA40.15-201ENST00000516884 SPOCK2Q92563 424 aa8.39□□□□□ -1.07
SNORA40.15-201ENST00000516884 OCEL1Q9H607 264 aa8.39□□□□□ -1.07
SNORA40.15-201ENST00000516884 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
SNORA40.15-201ENST00000516884 PDCD7Q8N8D1 485 aaKnown RBP8.36□□□□□ -1.07
SNORA40.15-201ENST00000516884 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
SNORA40.15-201ENST00000516884 PSEN1P49768 467 aa8.33□□□□□ -1.08
SNORA40.15-201ENST00000516884 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
SNORA40.15-201ENST00000516884 SLAIN1Q8ND83 568 aa8.32□□□□□ -1.08
SNORA40.15-201ENST00000516884 PDAP1Q13442 181 aaKnown RBP8.31□□□□□ -1.08
SNORA40.15-201ENST00000516884 PLSCR2Q9NRY7 297 aa8.3□□□□□ -1.08
SNORA40.15-201ENST00000516884 MKRN3Q13064 507 aaKnown RBP8.27□□□□□ -1.09
SNORA40.15-201ENST00000516884 TRIM41Q8WV44 630 aa8.27□□□□□ -1.09
SNORA40.15-201ENST00000516884 CIZ1Q9ULV3 898 aaPredicted RBP8.27□□□□□ -1.09
SNORA40.15-201ENST00000516884 ST18O60284 1047 aa8.26□□□□□ -1.09
SNORA40.15-201ENST00000516884 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.25□□□□□ -1.09
SNORA40.15-201ENST00000516884 GOLGA2Q08379 1002 aa8.24□□□□□ -1.09
SNORA40.15-201ENST00000516884 L3MBTL3Q96JM7 780 aaPredicted RBP8.24□□□□□ -1.09
SNORA40.15-201ENST00000516884 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNORA40.15-201ENST00000516884 TMEM121BQ9BXQ6 578 aaPredicted RBP8.21□□□□□ -1.1
SNORA40.15-201ENST00000516884 CABP2Q9NPB3 220 aa8.21□□□□□ -1.1
SNORA40.15-201ENST00000516884 SNPHO15079 494 aa8.2□□□□□ -1.1
SNORA40.15-201ENST00000516884 C3orf67Q6ZVT6 689 aa8.19□□□□□ -1.1
SNORA40.15-201ENST00000516884 DPY19L2Q6NUT2 758 aa8.18□□□□□ -1.1
SNORA40.15-201ENST00000516884 RNF25Q96BH1 459 aaPredicted RBP8.18□□□□□ -1.1
SNORA40.15-201ENST00000516884 CDAN1Q8IWY9 1227 aa8.17□□□□□ -1.1
SNORA40.15-201ENST00000516884 RIOK3O14730 519 aaKnown RBP8.14□□□□□ -1.11
SNORA40.15-201ENST00000516884 BOLA1Q9Y3E2 137 aa8.14□□□□□ -1.11
SNORA40.15-201ENST00000516884 EFCAB3Q8N7B9 438 aa8.13□□□□□ -1.11
SNORA40.15-201ENST00000516884 VGFO15240 615 aaPredicted RBP8.1□□□□□ -1.11
SNORA40.15-201ENST00000516884 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.09□□□□□ -1.11
SNORA40.15-201ENST00000516884 HOXB3P14651 431 aaPredicted RBP8.09□□□□□ -1.11
SNORA40.15-201ENST00000516884 ZFP91Q96JP5 570 aaPredicted RBP8.09□□□□□ -1.11
SNORA40.15-201ENST00000516884 SOX12O15370 315 aa8.08□□□□□ -1.12
SNORA40.15-201ENST00000516884 MARVELD3Q96A59 401 aa8.08□□□□□ -1.12
SNORA40.15-201ENST00000516884 MS4A4AQ96JQ5 239 aa8.08□□□□□ -1.12
SNORA40.15-201ENST00000516884 MICALL2Q8IY33 904 aa8.05□□□□□ -1.12
SNORA40.15-201ENST00000516884 G3V3G9 751 aa8.04□□□□□ -1.12
SNORA40.15-201ENST00000516884 POTEB3A0JP26 581 aa8.03□□□□□ -1.12
SNORA40.15-201ENST00000516884 EMP3P54852 163 aa8.03□□□□□ -1.12
SNORA40.15-201ENST00000516884 POTEBQ6S5H4 581 aa8.03□□□□□ -1.12
SNORA40.15-201ENST00000516884 TMEM92Q6UXU6 159 aa8.03□□□□□ -1.12
SNORA40.15-201ENST00000516884 FBXO22Q8NEZ5 403 aa8.01□□□□□ -1.13
SNORA40.15-201ENST00000516884 PHF8Q9UPP1 1060 aa8.01□□□□□ -1.13
SNORA40.15-201ENST00000516884 HOXB1P14653 301 aaPredicted RBP8□□□□□ -1.13
SNORA40.15-201ENST00000516884 SPNS2Q8IVW8 549 aa8□□□□□ -1.13
SNORA40.15-201ENST00000516884 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
SNORA40.15-201ENST00000516884 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
SNORA40.15-201ENST00000516884 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
SNORA40.15-201ENST00000516884 TAOK2Q9UL54 1235 aa7.99□□□□□ -1.13
SNORA40.15-201ENST00000516884 PKD2Q13563 968 aa7.98□□□□□ -1.13
SNORA40.15-201ENST00000516884 DOK7Q18PE1 504 aa7.98□□□□□ -1.13
SNORA40.15-201ENST00000516884 BCL11BQ9C0K0 894 aaPredicted RBP7.98□□□□□ -1.13
SNORA40.15-201ENST00000516884 MMRN1Q13201 1228 aa7.97□□□□□ -1.13
SNORA40.15-201ENST00000516884 FAM205CA6NFA0 338 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms